BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00008030
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   191   7e-47
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   177   1e-42
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   129   2e-28
emb|CBI17585.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24

>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  191 bits (484), Expect = 7e-47
 Identities = 97/147 (65%), Positives = 110/147 (74%)
 Frame = -3

Query: 441 EFNRFSTLQLHVRARSYARRRDPFPTKICHYLHRAKLIDSIRLTLRSNDPNSSLPTLVNH 262
           E N  + L   V+ARSYARRR+PFPTK+ HYLHRAKLIDSIRLTLRSN PN SLP+L+NH
Sbjct: 11  EANLLNGLTSRVQARSYARRREPFPTKVSHYLHRAKLIDSIRLTLRSNTPNPSLPSLINH 70

Query: 261 RLLDSFVVTHXXXXXXXXXXXXXXXXXLEKSPHFSHTQNTLHALATVFAKSGRCSELKSL 82
           RL+DSFV TH                 LEKS HFSHT +TLH+LATV AKSGR SELKSL
Sbjct: 71  RLMDSFVATHALRSAPSADSALSFVRALEKSSHFSHTHHTLHSLATVLAKSGRSSELKSL 130

Query: 81  IEAIRAKRFGNVRISLMNLMQWHAVAR 1
           ++ IRA RFG+V+IS MNLMQWHA  R
Sbjct: 131 VDDIRANRFGSVQISFMNLMQWHAAVR 157


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  177 bits (448), Expect = 1e-42
 Identities = 93/149 (62%), Positives = 110/149 (73%), Gaps = 2/149 (1%)
 Frame = -3

Query: 441 EFNRFSTLQLHVRARSYARRRDPFPTKICHYLHRAKLIDSIRLTLRSNDPNSSLPTLVNH 262
           EFN+    Q  ++ R Y RRRDPFPTKI HYL+RAKLIDSIRL+LRSN+PNS+L TL+NH
Sbjct: 9   EFNK-PAFQFRIQIRFYTRRRDPFPTKITHYLNRAKLIDSIRLSLRSNNPNSTLSTLINH 67

Query: 261 RLLDSFVVTHXXXXXXXXXXXXXXXXXLE--KSPHFSHTQNTLHALATVFAKSGRCSELK 88
           RL DSFV+TH                 +E  KS +FSHTQNTLHALATV AKSG+  ELK
Sbjct: 68  RLFDSFVLTHALRSAPCADSALSLIHTIENTKSSNFSHTQNTLHALATVLAKSGKLVELK 127

Query: 87  SLIEAIRAKRFGNVRISLMNLMQWHAVAR 1
           SLI+ I +KRFGNV+IS MNLMQW+A A+
Sbjct: 128 SLIDDIESKRFGNVKISFMNLMQWYAAAK 156


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/142 (49%), Positives = 88/142 (61%)
 Frame = -3

Query: 435 NRFSTLQLHVRARSYARRRDPFPTKICHYLHRAKLIDSIRLTLRSNDPNSSLPTLVNHRL 256
           N+F+ L   +R       RDPFP K+ HYL RA+LIDSIRL LRSN PNS    L N R+
Sbjct: 11  NKFNILTQQIRFFV----RDPFPNKLTHYLRRAELIDSIRLALRSNSPNSITTFLNNTRI 66

Query: 255 LDSFVVTHXXXXXXXXXXXXXXXXXLEKSPHFSHTQNTLHALATVFAKSGRCSELKSLIE 76
           LD FV+TH                 L+  PHF+H Q+T+HALATV A+S +  ELKSL+ 
Sbjct: 67  LDPFVITHTIRSAPSADSALFLIEILKNIPHFTHNQSTIHALATVLARSCKSFELKSLLN 126

Query: 75  AIRAKRFGNVRISLMNLMQWHA 10
            I   ++ NVR+S MNLMQW+A
Sbjct: 127 EINVGKYCNVRVSFMNLMQWYA 148


>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/125 (52%), Positives = 79/125 (63%)
 Frame = -3

Query: 378 DPFPTKICHYLHRAKLIDSIRLTLRSNDPNSSLPTLVNHRLLDSFVVTHXXXXXXXXXXX 199
           +PF  KI  YLHRA+LIDSIRL LRSN P S +P L+N   +DSFVV +           
Sbjct: 26  NPFSGKISLYLHRARLIDSIRLILRSNAPRSLIP-LLNDPTVDSFVVANALQSAPSPDSA 84

Query: 198 XXXXXXLEKSPHFSHTQNTLHALATVFAKSGRCSELKSLIEAIRAKRFGNVRISLMNLMQ 19
                 L+  PHF HTQ T+ ALA + AKS R +ELKSL++ I A +F NVRIS M LM+
Sbjct: 85  LSLLEILKTIPHFCHTQATIRALAKILAKSQRSAELKSLVDDINAGKFWNVRISFMELMK 144

Query: 18  WHAVA 4
           WHA A
Sbjct: 145 WHAAA 149


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/125 (52%), Positives = 79/125 (63%)
 Frame = -3

Query: 378 DPFPTKICHYLHRAKLIDSIRLTLRSNDPNSSLPTLVNHRLLDSFVVTHXXXXXXXXXXX 199
           +PF  KI  YLHRA+LIDSIRL LRSN P S +P L+N   +DSFVV +           
Sbjct: 26  NPFSGKISLYLHRARLIDSIRLILRSNAPRSLIP-LLNDPTVDSFVVANALQSAPSPDSA 84

Query: 198 XXXXXXLEKSPHFSHTQNTLHALATVFAKSGRCSELKSLIEAIRAKRFGNVRISLMNLMQ 19
                 L+  PHF HTQ T+ ALA + AKS R +ELKSL++ I A +F NVRIS M LM+
Sbjct: 85  LSLLEILKTIPHFCHTQATIRALAKILAKSQRSAELKSLVDDINAGKFWNVRISFMELMK 144

Query: 18  WHAVA 4
           WHA A
Sbjct: 145 WHAAA 149