BLASTX nr result

ID: Glycyrrhiza24_contig00007993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007993
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784...    97   2e-34
gb|AFK33423.1| unknown [Medicago truncatula]                           94   2e-34
ref|XP_003609663.1| hypothetical protein MTR_4g119780 [Medicago ...    94   2e-34
ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242...    80   8e-30
ref|NP_001238642.1| cold-regulated protein [Glycine max] gi|2130...    77   3e-27

>ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784458 [Glycine max]
          Length = 290

 Score = 97.1 bits (240), Expect(2) = 2e-34
 Identities = 49/76 (64%), Positives = 54/76 (71%), Gaps = 6/76 (7%)
 Frame = +1

Query: 259 AADKDIGSVHVPLKELLEHSGEGKSFQHVSYQVRKPSGKPKGALNFSYRFG------GGK 420
           A DKDIG VHVPL ELL+  G+GKSFQHVSYQVRKPSGKPKGALNFSY+FG         
Sbjct: 84  ATDKDIGQVHVPLMELLKQPGDGKSFQHVSYQVRKPSGKPKGALNFSYKFGDEFAAPAKV 143

Query: 421 PMTAPVNPKPKEEPFT 468
              AP +P  K +P T
Sbjct: 144 SAPAPTSPSHKVDPVT 159



 Score = 76.6 bits (187), Expect(2) = 2e-34
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = +2

Query: 2   AVVSVSGDPLHRQKTKTPVDKEGGTNPSWNFPINLTFNESLAQQNRLTLEIRLRCVR 172
           AV+S+SGD    QKTKTPV + GGTNP+WNFP+  TF+ES+A+QNRL LEI++R  R
Sbjct: 29  AVLSLSGD----QKTKTPVHRNGGTNPTWNFPVKFTFDESVARQNRLALEIKIRSER 81


>gb|AFK33423.1| unknown [Medicago truncatula]
          Length = 233

 Score = 94.0 bits (232), Expect(2) = 2e-34
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +2

Query: 2   AVVSVSGDPLHRQKTKTPVDKEGGTNPSWNFPINLTFNESLAQQNRLTLEIRLRCVR 172
           AVVS+ GDPLH+QKTKTP+D+E GTNP+WNF +  TFNE LA+QNRLTL+I LRC+R
Sbjct: 29  AVVSIFGDPLHKQKTKTPLDREAGTNPTWNFSVKFTFNELLARQNRLTLKITLRCLR 85



 Score = 79.3 bits (194), Expect(2) = 2e-34
 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = +1

Query: 265 DKDIGSVHVPLKELL-EHSGEGKSFQHVSYQVRKPSGKPKGALNFSYRFGGGKPMTAPVN 441
           DK+IGSV +PL+EL+ +H+G+G+ FQHVSYQVRKPSGKPKG+ NFSY+F       A   
Sbjct: 89  DKNIGSVKIPLRELVHDHTGDGELFQHVSYQVRKPSGKPKGSFNFSYKFNPPMKEHATGY 148

Query: 442 PKP 450
           P P
Sbjct: 149 PSP 151


>ref|XP_003609663.1| hypothetical protein MTR_4g119780 [Medicago truncatula]
           gi|217071956|gb|ACJ84338.1| unknown [Medicago
           truncatula] gi|355510718|gb|AES91860.1| hypothetical
           protein MTR_4g119780 [Medicago truncatula]
           gi|388514613|gb|AFK45368.1| unknown [Medicago
           truncatula]
          Length = 233

 Score = 94.0 bits (232), Expect(2) = 2e-34
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +2

Query: 2   AVVSVSGDPLHRQKTKTPVDKEGGTNPSWNFPINLTFNESLAQQNRLTLEIRLRCVR 172
           AVVS+ GDPLH+QKTKTP+D+E GTNP+WNF +  TFNE LA+QNRLTL+I LRC+R
Sbjct: 29  AVVSIFGDPLHKQKTKTPLDREAGTNPTWNFSVKFTFNELLARQNRLTLKITLRCLR 85



 Score = 79.3 bits (194), Expect(2) = 2e-34
 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = +1

Query: 265 DKDIGSVHVPLKELL-EHSGEGKSFQHVSYQVRKPSGKPKGALNFSYRFGGGKPMTAPVN 441
           DK+IGSV +PL+EL+ +H+G+G+ FQHVSYQVRKPSGKPKG+ NFSY+F       A   
Sbjct: 89  DKNIGSVKIPLRELVHDHTGDGELFQHVSYQVRKPSGKPKGSFNFSYKFNPPMKEHATGY 148

Query: 442 PKP 450
           P P
Sbjct: 149 PSP 151


>ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242678 [Vitis vinifera]
          Length = 291

 Score = 79.7 bits (195), Expect(2) = 8e-30
 Identities = 37/57 (64%), Positives = 45/57 (78%)
 Frame = +2

Query: 5   VVSVSGDPLHRQKTKTPVDKEGGTNPSWNFPINLTFNESLAQQNRLTLEIRLRCVRT 175
           VVS++GD   R K KTPVD++GGTNP+WNFP+  T +ES AQQNRLTL  +LRC RT
Sbjct: 30  VVSINGDS--RSKQKTPVDRDGGTNPTWNFPMKFTVDESAAQQNRLTLSFKLRCERT 84



 Score = 78.2 bits (191), Expect(2) = 8e-30
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = +1

Query: 265 DKDIGSVHVPLKELLEHSGEGKSFQHVSYQVRKPSGKPKGALNFSYRFG 411
           DKDIG V+VP+KELL+ +GE K  Q VSYQVRKPSGKPKG LN SY+FG
Sbjct: 87  DKDIGEVNVPIKELLDPAGESKPIQFVSYQVRKPSGKPKGELNLSYKFG 135


>ref|NP_001238642.1| cold-regulated protein [Glycine max] gi|213053828|gb|ACJ39219.1|
           cold-regulated protein [Glycine max]
          Length = 290

 Score = 76.6 bits (187), Expect(2) = 3e-27
 Identities = 37/66 (56%), Positives = 47/66 (71%)
 Frame = +1

Query: 265 DKDIGSVHVPLKELLEHSGEGKSFQHVSYQVRKPSGKPKGALNFSYRFGGGKPMTAPVNP 444
           D  IG+VHVPL+EL+++ G+  SF+ VSYQV K SGK KG+LNFSY+ G   P  AP  P
Sbjct: 91  DTVIGTVHVPLRELMDNPGDDGSFRQVSYQVMKQSGKSKGSLNFSYKVGEHVPAPAPKAP 150

Query: 445 KPKEEP 462
           K  +EP
Sbjct: 151 KTGQEP 156



 Score = 72.8 bits (177), Expect(2) = 3e-27
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 2   AVVSVSGDPLHRQKTKTPVDKEGGTNPSWNFPINLTFNESLAQQNRLTLEIRLRCVRT 175
           AVV++SGDPLH Q   T V K+ G+NP+WN+P+  + NESLA++NRL+LEI+L   RT
Sbjct: 31  AVVTLSGDPLHPQGATTHVHKDAGSNPTWNYPVKFSVNESLAKENRLSLEIKLVSDRT 88


Top