BLASTX nr result
ID: Glycyrrhiza24_contig00007982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00007982
(1699 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense] 280 8e-73
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M... 280 8e-73
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei... 257 6e-66
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 255 2e-65
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 254 4e-65
>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 280 bits (716), Expect = 8e-73
Identities = 139/163 (85%), Positives = 145/163 (88%)
Frame = -3
Query: 1583 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRLKREFESYGAIKRVRLVTDTVANKP 1404
EELEKYDP+ DPNISGDPYKTLFVARLSYETTESR+KREFESYGAIKRVRLVTDT +NKP
Sbjct: 120 EELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKP 179
Query: 1403 KGYAFIEYLHTRDMKAAYKQADGRKIEGKRVLVDVERGRTVPNWRPRXXXXXXXXXXXXX 1224
+GYAFIEYLHTRDMKAAYKQADGRKIEG+RVLVDVERGRTVPNWRPR
Sbjct: 180 RGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 239
Query: 1223 XXVNQRHSGREQQQSGPSRSEEPRVREDRHGDREREKSRERGK 1095
VNQRHSGREQQQSGPSRSEEPRVREDRH DR+REKSRERGK
Sbjct: 240 EEVNQRHSGREQQQSGPSRSEEPRVREDRHVDRDREKSRERGK 282
Score = 112 bits (281), Expect = 2e-22
Identities = 58/112 (51%), Positives = 66/112 (58%)
Frame = -3
Query: 830 VGETDRGRSHEREADYDLVXXXXXXXXXXXXXRDYEPEDDHGWYNQPGHGHRHADPEHDP 651
VG+TDRGRSH+R ADYD V RDYEP+D G YNQPGHG RHAD EHDP
Sbjct: 375 VGDTDRGRSHDRVADYDHVESKHEKEPHGEKERDYEPDDHRGRYNQPGHGKRHADTEHDP 434
Query: 650 DHYDQHEXXXXXXXXXXXXXXXXXXXXYPDHDKVEDGHHTERATSESRKREK 495
D YD +E YPDHDK+ED HHTER S+SR R++
Sbjct: 435 DRYDHYE-HQRGRGQYDEGDDHGDYNQYPDHDKMEDDHHTERPKSKSRDRDR 485
Score = 79.3 bits (194), Expect = 3e-12
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = -1
Query: 1699 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRIKRE 1583
EELEKYDP+ DPNISGDPYKTLFVARLSYETTESRIKRE
Sbjct: 120 EELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKRE 158
>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear
ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 280 bits (716), Expect = 8e-73
Identities = 138/163 (84%), Positives = 145/163 (88%)
Frame = -3
Query: 1583 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRLKREFESYGAIKRVRLVTDTVANKP 1404
EELEKYDP+NDPNISGDPYKTLFVARLSYETTESR+KREFESYGAIKRVRLVTD +NKP
Sbjct: 116 EELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKP 175
Query: 1403 KGYAFIEYLHTRDMKAAYKQADGRKIEGKRVLVDVERGRTVPNWRPRXXXXXXXXXXXXX 1224
+GYAFIEYLHTRDMKAAYKQADGRKIEG+RVLVDVERGRTVPNWRPR
Sbjct: 176 RGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 235
Query: 1223 XXVNQRHSGREQQQSGPSRSEEPRVREDRHGDREREKSRERGK 1095
VNQRHSGREQQQSGPSRSEEPRVRE+RH DR+REKSRERGK
Sbjct: 236 DEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGK 278
Score = 120 bits (300), Expect = 1e-24
Identities = 60/112 (53%), Positives = 69/112 (61%)
Frame = -3
Query: 830 VGETDRGRSHEREADYDLVXXXXXXXXXXXXXRDYEPEDDHGWYNQPGHGHRHADPEHDP 651
VGETDRGRSH+R ADYD V RDYEP+D HG Y +PGHGHRHADPEHDP
Sbjct: 371 VGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDP 430
Query: 650 DHYDQHEXXXXXXXXXXXXXXXXXXXXYPDHDKVEDGHHTERATSESRKREK 495
DHY+ +E YPDH K+ED HHTERA S+SR R++
Sbjct: 431 DHYNHYE-HQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDR 481
Score = 81.6 bits (200), Expect = 6e-13
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -1
Query: 1699 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRIKRE 1583
EELEKYDP+NDPNISGDPYKTLFVARLSYETTESRIKRE
Sbjct: 116 EELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKRE 154
>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 257 bits (657), Expect = 6e-66
Identities = 129/163 (79%), Positives = 138/163 (84%)
Frame = -3
Query: 1583 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRLKREFESYGAIKRVRLVTDTVANKP 1404
EELEKYDP+NDPN+SGDPYKTLFVA+LSYETTESR+KREFESYG IKRVRLV D NKP
Sbjct: 122 EELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKP 181
Query: 1403 KGYAFIEYLHTRDMKAAYKQADGRKIEGKRVLVDVERGRTVPNWRPRXXXXXXXXXXXXX 1224
+GYAFIEYLHTRDMKAAYKQADGRKI+G+RVLVDVERGRTVPNWRPR
Sbjct: 182 RGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 241
Query: 1223 XXVNQRHSGREQQQSGPSRSEEPRVREDRHGDREREKSRERGK 1095
VNQRHSGREQQQ SRSEEPRVREDRH DR+RE SRERG+
Sbjct: 242 EEVNQRHSGREQQQ---SRSEEPRVREDRHADRDREISRERGR 281
Score = 90.9 bits (224), Expect = 9e-16
Identities = 48/112 (42%), Positives = 60/112 (53%)
Frame = -3
Query: 830 VGETDRGRSHEREADYDLVXXXXXXXXXXXXXRDYEPEDDHGWYNQPGHGHRHADPEHDP 651
VG+ DRGRS +RE+DYD V DYEPEDD G +NQ HG RHADP+HDP
Sbjct: 364 VGDPDRGRSRDRESDYDRVESKHGERNH-----DYEPEDDRGRHNQYEHGRRHADPDHDP 418
Query: 650 DHYDQHEXXXXXXXXXXXXXXXXXXXXYPDHDKVEDGHHTERATSESRKREK 495
+ YD + DHD +ED +H RATSES ++E+
Sbjct: 419 ERYDHYNHGDDHGDHYNQYR---------DHDGMEDDYHAGRATSESHEKER 461
Score = 80.1 bits (196), Expect = 2e-12
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 1699 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRIKRE 1583
EELEKYDP+NDPN+SGDPYKTLFVA+LSYETTESRIKRE
Sbjct: 122 EELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKRE 160
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 255 bits (652), Expect = 2e-65
Identities = 126/164 (76%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
Frame = -3
Query: 1583 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRLKREFESYGAIKRVRLVTDTVANKP 1404
EEL+KYDPN+DPNISGDPYKTLFVARL+YETTESR+KREFESYG IKRVRL+TD ANKP
Sbjct: 119 EELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKP 178
Query: 1403 KGYAFIEYLHTRDMKAAYKQADGRKIEGKRVLVDVERGRTVPNWRPRXXXXXXXXXXXXX 1224
+GYAFIEY+HTRDMKAAYKQADGRK++G+RVLVDVERGRTVPNWRPR
Sbjct: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
Query: 1223 XXVNQRHSGREQQQS-GPSRSEEPRVREDRHGDREREKSRERGK 1095
VNQR+SGRE QQS G SRSEEPR REDR+ +R+REKSRERG+
Sbjct: 239 EEVNQRNSGRELQQSGGSSRSEEPRPREDRYNERDREKSRERGR 282
Score = 80.9 bits (198), Expect = 1e-12
Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Frame = -3
Query: 830 VGETDRGRSHEREADYDLVXXXXXXXXXXXXXRDY-EPEDDHGWYNQPGHGHRHADPEHD 654
VG+ DRGRSH+RE+DYD V ++ EPEDD GWY QP GHR D EHD
Sbjct: 373 VGDHDRGRSHDRESDYDRVESKHERDRRAERDYEHAEPEDDSGWYEQPEQGHRRQDAEHD 432
Query: 653 P--DHYDQHEXXXXXXXXXXXXXXXXXXXXYPDHDK------VEDGHHTERATSESRKRE 498
DHY+ YPDHD+ ED +H + TSESR+RE
Sbjct: 433 QRYDHYEHRS--RGQFDNMDGHGDHDRYDQYPDHDRDRYDRIDEDDYHYDGGTSESRERE 490
Score = 79.3 bits (194), Expect = 3e-12
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 1699 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRIKRE 1583
EEL+KYDPN+DPNISGDPYKTLFVARL+YETTESRIKRE
Sbjct: 119 EELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKRE 157
>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 254 bits (650), Expect = 4e-65
Identities = 128/161 (79%), Positives = 136/161 (84%)
Frame = -3
Query: 1583 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRLKREFESYGAIKRVRLVTDTVANKP 1404
EELEKYDP+NDPN+SGDPYKTLFVA+LSYETTESR+KREFESYG IKRVRLV D NKP
Sbjct: 122 EELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKP 181
Query: 1403 KGYAFIEYLHTRDMKAAYKQADGRKIEGKRVLVDVERGRTVPNWRPRXXXXXXXXXXXXX 1224
+GYAFIEYLHTRDMKAAYKQADGRKI+G+RVLVDVERGRTVPNWRPR
Sbjct: 182 RGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 241
Query: 1223 XXVNQRHSGREQQQSGPSRSEEPRVREDRHGDREREKSRER 1101
VNQRHSGREQQQ SRSEEPRVREDRH DR+RE SRER
Sbjct: 242 EEVNQRHSGREQQQ---SRSEEPRVREDRHSDRDREISRER 279
Score = 87.4 bits (215), Expect = 1e-14
Identities = 50/113 (44%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -3
Query: 830 VGETDRGRSHEREADYDLVXXXXXXXXXXXXXRDYEPEDDHGWYNQPGHGHRHADPEHD- 654
VGETDRGRS +RE+ Y+ V DYEPEDD G NQ HGHRHADP+HD
Sbjct: 362 VGETDRGRSRDRESHYNRVESKHGERNH-----DYEPEDDRGRQNQYEHGHRHADPDHDT 416
Query: 653 PDHYDQHEXXXXXXXXXXXXXXXXXXXXYPDHDKVEDGHHTERATSESRKREK 495
+HYD + YPD D++ED +H RATSES ++E+
Sbjct: 417 TEHYDPYN---------HGDDRGDHYNQYPDPDRMEDDYHAGRATSESHEKER 460
Score = 80.1 bits (196), Expect = 2e-12
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 1699 EELEKYDPNNDPNISGDPYKTLFVARLSYETTESRIKRE 1583
EELEKYDP+NDPN+SGDPYKTLFVA+LSYETTESRIKRE
Sbjct: 122 EELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKRE 160