BLASTX nr result

ID: Glycyrrhiza24_contig00007975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007975
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   197   2e-48
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   191   1e-46
ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago tr...   172   6e-41
ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...   133   4e-29
ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putativ...   130   4e-28

>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 746

 Score =  197 bits (500), Expect = 2e-48
 Identities = 108/169 (63%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3    IILATRVLKKKKLKINVHRPLGTRVVFDDEGNTLPPLARIADAQSGKETLLLDPEQKAEY 182
            II ATRVLKKKKLKINVHRPLGTRVVFDDEG+TLPPLARIAD QSGKE +LLDPEQKAEY
Sbjct: 580  IIPATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKE-MLLDPEQKAEY 638

Query: 183  YKRMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGDAEEEDSQEDISGSEGEETVDRR 362
            Y+RMR                            WKAG+AEE+D Q+DISGSEG+ETVDR 
Sbjct: 639  YRRMRDDLKKADKEDKLIERQRLREKRIKQKMKWKAGNAEEDD-QDDISGSEGDETVDRL 697

Query: 363  HKKSKIYFDSDNDEGERNEITGNA-----GITXXXXXXXXXXXXNSMHS 494
            HKKSK+YFDSD+DEGERNE+TGNA     G+T            NSMHS
Sbjct: 698  HKKSKVYFDSDSDEGERNEVTGNARTSTGGVTLEEQEALALKLLNSMHS 746


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 743

 Score =  191 bits (485), Expect = 1e-46
 Identities = 101/147 (68%), Positives = 113/147 (76%)
 Frame = +3

Query: 3    IILATRVLKKKKLKINVHRPLGTRVVFDDEGNTLPPLARIADAQSGKETLLLDPEQKAEY 182
            II ATRVLKKKKLKINVHRPLGTRVVFDDEG+TLPPLARIAD QSGKE +LLDPE+KAEY
Sbjct: 577  IIPATRVLKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKE-MLLDPEKKAEY 635

Query: 183  YKRMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGDAEEEDSQEDISGSEGEETVDRR 362
            Y+RMR                            WKAG+AEE+D Q+DISGSE +ETVDR 
Sbjct: 636  YRRMRDDLKKADNEDKLIERQRLREKRIKQKMKWKAGNAEEDD-QDDISGSEVDETVDRW 694

Query: 363  HKKSKIYFDSDNDEGERNEITGNAGIT 443
            HKKSK+YFDSD+DEGERN++TGNAGIT
Sbjct: 695  HKKSKVYFDSDSDEGERNDVTGNAGIT 721


>ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
           gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase
           DBP4 [Medicago truncatula]
          Length = 747

 Score =  172 bits (436), Expect = 6e-41
 Identities = 88/136 (64%), Positives = 99/136 (72%)
 Frame = +3

Query: 12  ATRVLKKKKLKINVHRPLGTRVVFDDEGNTLPPLARIADAQSGKETLLLDPEQKAEYYKR 191
           ATR+LKKKKLKIN HRPLG+RVVFDDEGNTLPPLARIAD QSG  T L+DPEQKAEYYKR
Sbjct: 592 ATRLLKKKKLKINTHRPLGSRVVFDDEGNTLPPLARIADPQSGNGT-LIDPEQKAEYYKR 650

Query: 192 MRXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGDAEEEDSQEDISGSEGEETVDRRHKK 371
           MR                            WKAG+ EEED+Q+D SGSEG+E ++RRHKK
Sbjct: 651 MREDLKKADKEDKLVERQRLRDKKFKQKMKWKAGNEEEEDNQDDTSGSEGDEPINRRHKK 710

Query: 372 SKIYFDSDNDEGERNE 419
           SKIYFDSD+DEG+R E
Sbjct: 711 SKIYFDSDSDEGQRKE 726


>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
            predicted protein [Populus trichocarpa]
          Length = 766

 Score =  133 bits (334), Expect = 4e-29
 Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3    IILATRVLKKKKLKINVHRPLGTRVVFDDEGNTLPPLARIADAQSGKETLLLDPEQKAEY 182
            ++ ATRVLKKKKLKINVHRP+GTRVVFD+EGNTLPPLAR+AD ++   + LLD +++ EY
Sbjct: 598  LVPATRVLKKKKLKINVHRPVGTRVVFDEEGNTLPPLARVADRKNVDNSSLLDQDKREEY 657

Query: 183  YKRMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGD---AEEEDSQEDISGSEGEETV 353
            YK MR                             K G     E+ + ++D+SGSEGE   
Sbjct: 658  YKNMREQMKHVDKEDKVLDRQRRREKRIKEKMKRKIGSMGLEEDGEGEDDLSGSEGE--- 714

Query: 354  DRRHKKSKIYFDSDNDEGERNEITGNAGIT 443
             R+HK+SKIYFDSD+D  E  E   NAGI+
Sbjct: 715  GRKHKRSKIYFDSDSDNAEMTESKDNAGIS 744


>ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537764|gb|EEF39382.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 753

 Score =  130 bits (326), Expect = 4e-28
 Identities = 71/137 (51%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = +3

Query: 12  ATRVLKKKKLKINVHRPLGTRVVFDDEGNTLPPLARIADAQSGKETLLLDPEQKAEYYKR 191
           ATRVLKKKKLKIN+HRP+GTRVVFD+EGNTLPPLAR+ADA++   + LLD  Q+ E+YK+
Sbjct: 589 ATRVLKKKKLKINIHRPVGTRVVFDEEGNTLPPLARVADAKNSDNSCLLDQGQREEHYKK 648

Query: 192 MRXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGDA-EEEDSQEDISGSEGEETVDRRHK 368
            R                             K   A EEED  +DISGSE E   DR+ K
Sbjct: 649 AREALMLADKEDKLLDRQRRREKRTKEKMKRKKQIAEEEEDIDDDISGSEEERAGDRKSK 708

Query: 369 KSKIYFDSDNDEGERNE 419
           +SKIYF+SD+D+GE  E
Sbjct: 709 RSKIYFNSDSDDGETKE 725


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