BLASTX nr result

ID: Glycyrrhiza24_contig00007919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007919
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531340.1| PREDICTED: tRNA (cytosine(34)-C(5))-methyltr...   263   1e-68
ref|XP_002531671.1| conserved hypothetical protein [Ricinus comm...   244   5e-63
ref|XP_002309966.1| predicted protein [Populus trichocarpa] gi|2...   244   9e-63
ref|XP_003537565.1| PREDICTED: tRNA (cytosine(34)-C(5))-methyltr...   231   6e-59
ref|XP_002271053.2| PREDICTED: tRNA (cytosine(34)-C(5))-methyltr...   227   1e-57

>ref|XP_003531340.1| PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase-like [Glycine
           max]
          Length = 820

 Score =  263 bits (673), Expect = 1e-68
 Identities = 127/155 (81%), Positives = 136/155 (87%)
 Frame = -3

Query: 465 RSRTQRKHFRQSRENVWKRSKSDHSDPSLTSEAQNQNPPWTPFSTQNPSFDAYYKEQGIV 286
           RSRTQRKHFRQSR+NVWKRSKSD +  S        NPPWTPF+T+N +FD YYKEQGIV
Sbjct: 9   RSRTQRKHFRQSRDNVWKRSKSDPNPSS-----NENNPPWTPFATENAAFDFYYKEQGIV 63

Query: 285 GQQEWDEFVALLRTPLPATFRINSSSQFSADIRSQLENDFVHSLRAEVVEGGETEAIRPL 106
             Q WD+FVA+LRTPLPATFRINSSSQFS D+RSQLENDF+HSLR EVVEGGETEAIRPL
Sbjct: 64  DPQHWDQFVAVLRTPLPATFRINSSSQFSDDLRSQLENDFLHSLRDEVVEGGETEAIRPL 123

Query: 105 PWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 1
            WYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN
Sbjct: 124 LWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 158


>ref|XP_002531671.1| conserved hypothetical protein [Ricinus communis]
           gi|223528702|gb|EEF30715.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 843

 Score =  244 bits (624), Expect = 5e-63
 Identities = 116/155 (74%), Positives = 128/155 (82%)
 Frame = -3

Query: 465 RSRTQRKHFRQSRENVWKRSKSDHSDPSLTSEAQNQNPPWTPFSTQNPSFDAYYKEQGIV 286
           RSRTQRKHFR  REN+WKR KSD SDP+ T++    NP W PF+TQN +FD YYKEQGIV
Sbjct: 10  RSRTQRKHFRDGRENIWKRPKSDSSDPTNTTD----NPTWQPFATQNLAFDEYYKEQGIV 65

Query: 285 GQQEWDEFVALLRTPLPATFRINSSSQFSADIRSQLENDFVHSLRAEVVEGGETEAIRPL 106
             +EWD FV +LR PLPA FRINSSSQF  DIR QLENDF+ SL+AEV +GGE +AIRPL
Sbjct: 66  ATEEWDTFVEVLRKPLPAAFRINSSSQFCTDIRLQLENDFMRSLQAEVADGGEVDAIRPL 125

Query: 105 PWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 1
           PWYP N AWHSNFSRMQLRKNQTLERFHEFLKLEN
Sbjct: 126 PWYPDNLAWHSNFSRMQLRKNQTLERFHEFLKLEN 160


>ref|XP_002309966.1| predicted protein [Populus trichocarpa] gi|222852869|gb|EEE90416.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  244 bits (622), Expect = 9e-63
 Identities = 117/157 (74%), Positives = 131/157 (83%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465 RSRTQRKHFRQSRENVWKRSKSDH--SDPSLTSEAQNQNPPWTPFSTQNPSFDAYYKEQG 292
           RSRTQRKHFR  RENVWKR KSD   SDP+  + ++N+   W PF+TQNP+FD YYKEQG
Sbjct: 9   RSRTQRKHFRDGRENVWKRPKSDSASSDPNSNNNSENKTH-WQPFATQNPAFDEYYKEQG 67

Query: 291 IVGQQEWDEFVALLRTPLPATFRINSSSQFSADIRSQLENDFVHSLRAEVVEGGETEAIR 112
           IV  +EWD FV +LRTPLPA FRINSSSQF  DI+SQLENDF++SL+AE  +GGE EAIR
Sbjct: 68  IVTAEEWDTFVEVLRTPLPAAFRINSSSQFCEDIKSQLENDFMNSLKAETTDGGEVEAIR 127

Query: 111 PLPWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 1
           PLPWYP N AWHSNFSRMQLRKNQTLERFHEFLKLEN
Sbjct: 128 PLPWYPDNLAWHSNFSRMQLRKNQTLERFHEFLKLEN 164


>ref|XP_003537565.1| PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase-like [Glycine
           max]
          Length = 810

 Score =  231 bits (589), Expect = 6e-59
 Identities = 113/155 (72%), Positives = 127/155 (81%)
 Frame = -3

Query: 465 RSRTQRKHFRQSRENVWKRSKSDHSDPSLTSEAQNQNPPWTPFSTQNPSFDAYYKEQGIV 286
           +SRTQRKHF+Q+RENVW  SK   SDPS    ++N  P   P++TQN +FD YYKEQGIV
Sbjct: 8   KSRTQRKHFQQNRENVWTSSKRSKSDPS----SENPIPICNPYATQNLAFDHYYKEQGIV 63

Query: 285 GQQEWDEFVALLRTPLPATFRINSSSQFSADIRSQLENDFVHSLRAEVVEGGETEAIRPL 106
             +EWD FV +LRTPLPA FRINS+S+FSADIRSQLENDFVHSL+AEV EG +TEAI PL
Sbjct: 64  SSEEWDAFVQVLRTPLPAAFRINSTSRFSADIRSQLENDFVHSLQAEVAEGEDTEAIIPL 123

Query: 105 PWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 1
           PWYP N AWHSNFSR QLRKNQTL RFHEFLKLEN
Sbjct: 124 PWYPENLAWHSNFSRKQLRKNQTLGRFHEFLKLEN 158


>ref|XP_002271053.2| PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase-like [Vitis
           vinifera]
          Length = 834

 Score =  227 bits (578), Expect = 1e-57
 Identities = 107/155 (69%), Positives = 123/155 (79%)
 Frame = -3

Query: 465 RSRTQRKHFRQSRENVWKRSKSDHSDPSLTSEAQNQNPPWTPFSTQNPSFDAYYKEQGIV 286
           R+RTQRKHFR++RENVWKRS+ + SD        N N  W PF+TQNP+FD YYKEQGIV
Sbjct: 11  RARTQRKHFRENRENVWKRSRHESSD-------SNTNSGWEPFATQNPAFDEYYKEQGIV 63

Query: 285 GQQEWDEFVALLRTPLPATFRINSSSQFSADIRSQLENDFVHSLRAEVVEGGETEAIRPL 106
             +EWD F +++R PLPA FR+NSSSQF ADI SQLENDF+ SL+ E  +GGE EAIRPL
Sbjct: 64  SLEEWDTFNSVIRKPLPAAFRVNSSSQFCADILSQLENDFMKSLQTEATDGGEVEAIRPL 123

Query: 105 PWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLEN 1
           PWYP N AW SN+SRMQLRKNQTLERFHEFLK EN
Sbjct: 124 PWYPENLAWQSNYSRMQLRKNQTLERFHEFLKQEN 158


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