BLASTX nr result

ID: Glycyrrhiza24_contig00007893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007893
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatul...   238   5e-61
ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatul...   238   5e-61
ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatul...   238   5e-61
gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK...   237   1e-60
ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [...   236   2e-60

>ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355504208|gb|AES85411.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score =  238 bits (608), Expect = 5e-61
 Identities = 117/119 (98%), Positives = 119/119 (100%)
 Frame = +2

Query: 2   RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 181
           RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV
Sbjct: 116 RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 175

Query: 182 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIEVPV 358
           LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIH+PKEEEEYIRPAAV+ANDIEVPV
Sbjct: 176 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234


>ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355478377|gb|AES59580.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score =  238 bits (608), Expect = 5e-61
 Identities = 117/119 (98%), Positives = 119/119 (100%)
 Frame = +2

Query: 2   RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 181
           RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV
Sbjct: 116 RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 175

Query: 182 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIEVPV 358
           LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIH+PKEEEEYIRPAAV+ANDIEVPV
Sbjct: 176 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234


>ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|217071466|gb|ACJ84093.1| unknown [Medicago
           truncatula] gi|355479171|gb|AES60374.1| 40S ribosomal
           protein S3 [Medicago truncatula]
           gi|388518095|gb|AFK47109.1| unknown [Medicago
           truncatula]
          Length = 239

 Score =  238 bits (608), Expect = 5e-61
 Identities = 117/119 (98%), Positives = 119/119 (100%)
 Frame = +2

Query: 2   RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 181
           RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV
Sbjct: 116 RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 175

Query: 182 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIEVPV 358
           LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIH+PKEEEEYIRPAAV+ANDIEVPV
Sbjct: 176 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234


>gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK41976.1| unknown
           [Medicago truncatula]
          Length = 239

 Score =  237 bits (604), Expect = 1e-60
 Identities = 116/119 (97%), Positives = 118/119 (99%)
 Frame = +2

Query: 2   RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 181
           RR CYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV
Sbjct: 116 RRVCYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 175

Query: 182 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIEVPV 358
           LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIH+PKEEEEYIRPAAV+ANDIEVPV
Sbjct: 176 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234


>ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
          Length = 235

 Score =  236 bits (602), Expect = 2e-60
 Identities = 116/120 (96%), Positives = 118/120 (98%)
 Frame = +2

Query: 2   RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 181
           RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV
Sbjct: 116 RRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHV 175

Query: 182 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIEVPVA 361
           LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPD+VTIH+PKEEEEY RPAAVLA DIEVPVA
Sbjct: 176 LLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235


Top