BLASTX nr result

ID: Glycyrrhiza24_contig00007892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007892
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   4e-26
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   7e-26
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   114   6e-24
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   105   4e-21
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   100   2e-19

>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/85 (71%), Positives = 64/85 (75%)
 Frame = +3

Query: 225 SLSTXXXXXXXXXXXVKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSL 404
           SL T           VKL S+DQR ALPGEPKC ICGRYGEYICDETDDDVCSLECKQ+L
Sbjct: 12  SLDTDAEAPNDVEDDVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQAL 71

Query: 405 LCRIAKSLSSVGGLPPPKKLPAADE 479
           LCRIAKSLS     PPPK +PAADE
Sbjct: 72  LCRIAKSLS-----PPPKTIPAADE 91


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/85 (70%), Positives = 65/85 (76%)
 Frame = +3

Query: 225 SLSTXXXXXXXXXXXVKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSL 404
           SL+T           VKL S+DQR ALPGEPKC ICGRYGEYICDETDDDVCSLECKQ+L
Sbjct: 12  SLATDTDAPNDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQAL 71

Query: 405 LCRIAKSLSSVGGLPPPKKLPAADE 479
           LCRIAKS S     PPPK++PAADE
Sbjct: 72  LCRIAKSSS-----PPPKRIPAADE 91


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/70 (77%), Positives = 58/70 (82%)
 Frame = +3

Query: 270 VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGGLP 449
           VK    DQREALPGEPKC ICGRYGEYICDETDDD+CSLECKQ+LLCR+AKS   V  LP
Sbjct: 27  VKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSLECKQTLLCRVAKSRLPV-VLP 85

Query: 450 PPKKLPAADE 479
           PPK+LP  DE
Sbjct: 86  PPKRLPTTDE 95


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/70 (70%), Positives = 58/70 (82%)
 Frame = +3

Query: 270 VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGGLP 449
           VK +S++QREAL GEPKC +CGRYGEYICDETDDD+CSLECKQ LL  + KS  SV G+P
Sbjct: 14  VKKTSREQREALQGEPKCVLCGRYGEYICDETDDDICSLECKQILLGGVGKSDISV-GIP 72

Query: 450 PPKKLPAADE 479
           PP++L A DE
Sbjct: 73  PPRRLAATDE 82


>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = +3

Query: 270 VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGGLP 449
           VK+   +QREA PGEPKC +CGRYGEYICDETDDDVCS+ECKQS+L ++A +++      
Sbjct: 27  VKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAP--DKA 84

Query: 450 PPKKLPAADE 479
           P K+LPAADE
Sbjct: 85  PSKRLPAADE 94


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