BLASTX nr result

ID: Glycyrrhiza24_contig00007888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007888
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   149   9e-34
gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]              140   4e-31
gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]              140   6e-31
ref|XP_002318030.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-30
gb|ABK95217.1| unknown [Populus trichocarpa]                          138   2e-30

>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  149 bits (376), Expect = 9e-34
 Identities = 73/81 (90%), Positives = 76/81 (93%)
 Frame = +2

Query: 452 MGSSEPGFEDFLGEKKRVRNPLVPVGALITAGVLTAGLISFRRGNSNLGQKLMRARVVVQ 631
           MGS EPGFEDFL EKKRVRNP VP+GALITAGVLTAGLISFR+GNS LGQKLMRARVVVQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 632 GATVALMVGTAYYYGENPWLK 694
           GATVALMVGTAYYYG+NPW K
Sbjct: 61  GATVALMVGTAYYYGDNPWQK 81


>gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  140 bits (353), Expect = 4e-31
 Identities = 70/82 (85%), Positives = 73/82 (89%)
 Frame = +2

Query: 452 MGSSEPGFEDFLGEKKRVRNPLVPVGALITAGVLTAGLISFRRGNSNLGQKLMRARVVVQ 631
           M S EP FE+ L EKKRVRNPLVPVGALITAGVLTAGLISFR+GNS LGQ LMRARVVVQ
Sbjct: 1   MSSGEPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 632 GATVALMVGTAYYYGENPWLKS 697
           GATVALMVGTAYYYG+NPW  S
Sbjct: 61  GATVALMVGTAYYYGDNPWKSS 82


>gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  140 bits (352), Expect = 6e-31
 Identities = 70/82 (85%), Positives = 73/82 (89%)
 Frame = +2

Query: 452 MGSSEPGFEDFLGEKKRVRNPLVPVGALITAGVLTAGLISFRRGNSNLGQKLMRARVVVQ 631
           M S EP FE+ L EKKRVRNPLVPVGALITAGVLTAGLISFR+GNS LGQ LMRARVVVQ
Sbjct: 1   MSSREPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 632 GATVALMVGTAYYYGENPWLKS 697
           GATVALMVGTAYYYG+NPW  S
Sbjct: 61  GATVALMVGTAYYYGDNPWKSS 82


>ref|XP_002318030.1| predicted protein [Populus trichocarpa]
           gi|224133480|ref|XP_002321578.1| predicted protein
           [Populus trichocarpa] gi|222858703|gb|EEE96250.1|
           predicted protein [Populus trichocarpa]
           gi|222868574|gb|EEF05705.1| predicted protein [Populus
           trichocarpa]
          Length = 81

 Score =  138 bits (348), Expect = 2e-30
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = +2

Query: 452 MGSSEPGFEDFLGEKKRVRNPLVPVGALITAGVLTAGLISFRRGNSNLGQKLMRARVVVQ 631
           MG++EP FE    EKKRVRNPLVPVGAL+TAGVLTAGLISFRRGNS LGQ LMRARVVVQ
Sbjct: 1   MGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 632 GATVALMVGTAYYYGENPWLK 694
           GATVALMVGTA+YYG+NPW K
Sbjct: 61  GATVALMVGTAFYYGDNPWKK 81


>gb|ABK95217.1| unknown [Populus trichocarpa]
          Length = 86

 Score =  138 bits (348), Expect = 2e-30
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = +2

Query: 452 MGSSEPGFEDFLGEKKRVRNPLVPVGALITAGVLTAGLISFRRGNSNLGQKLMRARVVVQ 631
           MG++EP FE    EKKRVRNPLVPVGAL+TAGVLTAGLISFRRGNS LGQ LMRARVVVQ
Sbjct: 4   MGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 63

Query: 632 GATVALMVGTAYYYGENPWLK 694
           GATVALMVGTA+YYG+NPW K
Sbjct: 64  GATVALMVGTAFYYGDNPWKK 84


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