BLASTX nr result

ID: Glycyrrhiza24_contig00007809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007809
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|35550...   228   6e-79
ref|XP_003617953.1| F-box protein [Medicago truncatula] gi|35551...   231   2e-75
ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548...   214   3e-75
gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma...   214   3e-75
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   211   3e-73

>ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|355503767|gb|AES84970.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score =  228 bits (582), Expect(2) = 6e-79
 Identities = 126/233 (54%), Positives = 157/233 (67%), Gaps = 2/233 (0%)
 Frame = -2

Query: 771 DDYKVIRYVSFTDLSYYDVARLGLSWDDVPWE--NRYYEPIWEIYSLRSNSWRKLDANIP 598
           DDYKVIRYV + D+   D        DD+  E  +   + +WEIY+LRSNSWRKLD ++P
Sbjct: 173 DDYKVIRYVEYLDVRD-DFE------DDMEGEPISLLRDDMWEIYNLRSNSWRKLDLDLP 225

Query: 597 TPHSRSTIYFRVYLDGMCHWWNEGITMPRKDHGAYLVSFDLGNEVFCITPRPXXXXXXXX 418
             H R  +   VY++G+CHW+ +       +H  YLVSFDL NEV+C TP P        
Sbjct: 226 RAH-RGWVGVYVYMNGVCHWYQDEF-----EHKGYLVSFDLSNEVYCTTPLPLYMNDGFD 279

Query: 417 XXFEWLHRHLVVLNGSIALISNYEKTTTFHISILGEIGVKESWTKLFIVGPLPFIEHPIG 238
               +L R+L+VLN  IALISNY + TTFHISILGE+GVKESWTKLFI+GPLP IEHPIG
Sbjct: 280 SV--FLLRYLMVLNDHIALISNYVEMTTFHISILGELGVKESWTKLFIIGPLPCIEHPIG 337

Query: 237 VGKKGNVFFRKKDNELVWFDLSTQMTRELGVKGGSFSCQIVIYKENLLPIGGI 79
            GK G++FF +KD ELV ++LSTQ+  ELG+KG    CQIV Y E+ LPIG I
Sbjct: 338 EGKNGDLFFSRKDGELVRYNLSTQVIDELGLKGEFSCCQIVNYMESSLPIGQI 390



 Score = 93.6 bits (231), Expect(2) = 6e-79
 Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = -3

Query: 1121 HATLYSLSGERYESRVKLDWPSVDWPSPFLDDDIERNIFILG-CVNGTLCLSAVTSEEKR 945
            H  LY L GER+E++VKLDWP      PF +D+I   I ILG  +N   CL      E  
Sbjct: 81   HHVLYLLFGERFENKVKLDWPP-----PFQEDNI--GIHILGPVINDNFCL--YQGREPV 131

Query: 944  VVLWNPATEEFKVIPPSPVDS-IPYQNVYVFLHGFGYD 834
            V+LWNP TEE+KV+PPSP +S + Y+ VY ++HGFGYD
Sbjct: 132  VILWNPGTEEYKVLPPSPTESPVIYEEVYYYVHGFGYD 169


>ref|XP_003617953.1| F-box protein [Medicago truncatula] gi|355519288|gb|AET00912.1|
           F-box protein [Medicago truncatula]
          Length = 404

 Score =  231 bits (590), Expect(2) = 2e-75
 Identities = 126/233 (54%), Positives = 155/233 (66%), Gaps = 1/233 (0%)
 Frame = -2

Query: 771 DDYKVIRYVSFTDLSYYDVARLGLSWDDVPWENRYYEPIWEIYSLRSNSWRKLDANIPTP 592
           DDYKVIRY+SF   +  D         D  W++ Y+  +WEIY L+SNSWRKLD N+PT 
Sbjct: 188 DDYKVIRYISFYPKTDED--------SDETWKDGYHSSLWEIYCLKSNSWRKLDINMPTQ 239

Query: 591 HSRSTIYFRVYLDGMCHWWNEGITMPRKDHGAYLVSFDLGNEVFCITPRPXXXXXXXXXX 412
                +  +VY+DG+CHWW E  T        YLVSFDL +EVF  T  P          
Sbjct: 240 AYGGMV--QVYMDGVCHWWGECETSDE----VYLVSFDLYSEVFVKTFIPLNMNDIDSRQ 293

Query: 411 FEWLHRHLVVLNGSIALISNYEKTTTFHISILGEIGVKESWTKLFIVGPLPFIEHPIGVG 232
              + RHL VLNGSI LI NY ++TTFHISILGE+GVKESW KLFIVGPL  +EHPIGVG
Sbjct: 294 ---VFRHLNVLNGSIGLILNYVESTTFHISILGEVGVKESWIKLFIVGPLTCVEHPIGVG 350

Query: 231 KKGNVFFRKKDNELVWFDLSTQMTRELGVKGGS-FSCQIVIYKENLLPIGGIN 76
           K G+++ +KKDN+LV F+L TQ   ELGVKG +  SCQI++Y+E+LLPI  IN
Sbjct: 351 KNGDIYLKKKDNKLVCFNLITQKIEELGVKGETGQSCQIIVYEESLLPIERIN 403



 Score = 78.6 bits (192), Expect(2) = 2e-75
 Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
 Frame = -3

Query: 1112 LYSLSGERYESRVKLDWPSVDWPSPFLDDDIERNIFILGCVNGTLCLS--------AVTS 957
            LYSL GER+++ VKL     DWP+PF  D  E +  + GCVNG LC+             
Sbjct: 90   LYSLFGERFQNMVKL-----DWPNPFQKD--EFHFLVRGCVNGILCIEDDGRDGGILCIE 142

Query: 956  EEKRVVLWNPATEEFKVIPPSP-VDSIPYQNVYVFLHGFGYD 834
            E +R+ LWN  T EFK  PPSP     P  +  + LHGFGYD
Sbjct: 143  ELQRIALWNTTTGEFKATPPSPFAFESPCWDPMICLHGFGYD 184


>ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1|
           F-box protein [Medicago truncatula]
          Length = 460

 Score =  214 bits (545), Expect(2) = 3e-75
 Identities = 113/214 (52%), Positives = 140/214 (65%), Gaps = 3/214 (1%)
 Frame = -2

Query: 771 DDYKVIRYVSFTDLSYYDVARLGLSWDDVPWENRYYEPIWEIYSLRSNSWRKLDAN---I 601
           DDYKVIRYV F  LS+YD+   GLS  +  W++   EP+WEIYSLRSNSW+KLD +   +
Sbjct: 188 DDYKVIRYVEFDSLSFYDIMSRGLSEQEASWKDVPMEPLWEIYSLRSNSWKKLDVDMSMV 247

Query: 600 PTPHSRSTIYFRVYLDGMCHWWNEGITMPRKDHGAYLVSFDLGNEVFCITPRPXXXXXXX 421
            +P +R     R Y+DGMCHWW++ I     D   Y VSFD+ NEV   TP P       
Sbjct: 248 MSPETREETV-RFYMDGMCHWWDK-IEKDSDDGETYFVSFDVTNEVCFTTPMPSDIDDTF 305

Query: 420 XXXFEWLHRHLVVLNGSIALISNYEKTTTFHISILGEIGVKESWTKLFIVGPLPFIEHPI 241
                 + R LV+LN SI LIS   +T T H+SILGEIGVKESWTKLFIVG LP +++PI
Sbjct: 306 DIRL--VKRQLVMLNRSIGLISYSGETNTLHVSILGEIGVKESWTKLFIVGSLPHVKYPI 363

Query: 240 GVGKKGNVFFRKKDNELVWFDLSTQMTRELGVKG 139
             GK G++FF KKD EL  F+L TQ  +ELGV+G
Sbjct: 364 EAGKNGDIFFIKKDGELACFNLDTQTIKELGVEG 397



 Score = 95.5 bits (236), Expect(2) = 3e-75
 Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -3

Query: 1118 ATLYSLSGERYESRVKLDWPSVDWPSPFLDDDIERNIFILGCV--NGTLCLSAVTSEEKR 945
            +TLY +SGE++E+RVKL+   +  P   L  DI    +ILG +  NG LCLS +  +E++
Sbjct: 95   STLYFISGEKFENRVKLN---LSLPFQVLGQDI----YILGSISINGFLCLSNLLDDERK 147

Query: 944  VVLWNPATEEFKVIPPSPVDSIPYQNVYVFLHGFGYD 834
             VLWNP T+EF VIP SPV+S+PY+    F+HGFGYD
Sbjct: 148  AVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGFGYD 184


>gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago
           truncatula]
          Length = 438

 Score =  214 bits (545), Expect(2) = 3e-75
 Identities = 113/214 (52%), Positives = 140/214 (65%), Gaps = 3/214 (1%)
 Frame = -2

Query: 771 DDYKVIRYVSFTDLSYYDVARLGLSWDDVPWENRYYEPIWEIYSLRSNSWRKLDAN---I 601
           DDYKVIRYV F  LS+YD+   GLS  +  W++   EP+WEIYSLRSNSW+KLD +   +
Sbjct: 188 DDYKVIRYVEFDSLSFYDIMSRGLSEQEASWKDVPMEPLWEIYSLRSNSWKKLDVDMSMV 247

Query: 600 PTPHSRSTIYFRVYLDGMCHWWNEGITMPRKDHGAYLVSFDLGNEVFCITPRPXXXXXXX 421
            +P +R     R Y+DGMCHWW++ I     D   Y VSFD+ NEV   TP P       
Sbjct: 248 MSPETREETV-RFYMDGMCHWWDK-IEKDSDDGETYFVSFDVTNEVCFTTPMPSDIDDTF 305

Query: 420 XXXFEWLHRHLVVLNGSIALISNYEKTTTFHISILGEIGVKESWTKLFIVGPLPFIEHPI 241
                 + R LV+LN SI LIS   +T T H+SILGEIGVKESWTKLFIVG LP +++PI
Sbjct: 306 DIRL--VKRQLVMLNRSIGLISYSGETNTLHVSILGEIGVKESWTKLFIVGSLPHVKYPI 363

Query: 240 GVGKKGNVFFRKKDNELVWFDLSTQMTRELGVKG 139
             GK G++FF KKD EL  F+L TQ  +ELGV+G
Sbjct: 364 EAGKNGDIFFIKKDGELACFNLDTQTIKELGVEG 397



 Score = 95.5 bits (236), Expect(2) = 3e-75
 Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -3

Query: 1118 ATLYSLSGERYESRVKLDWPSVDWPSPFLDDDIERNIFILGCV--NGTLCLSAVTSEEKR 945
            +TLY +SGE++E+RVKL+   +  P   L  DI    +ILG +  NG LCLS +  +E++
Sbjct: 95   STLYFISGEKFENRVKLN---LSLPFQVLGQDI----YILGSISINGFLCLSNLLDDERK 147

Query: 944  VVLWNPATEEFKVIPPSPVDSIPYQNVYVFLHGFGYD 834
             VLWNP T+EF VIP SPV+S+PY+    F+HGFGYD
Sbjct: 148  AVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGFGYD 184


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  211 bits (538), Expect(2) = 3e-73
 Identities = 113/233 (48%), Positives = 147/233 (63%)
 Frame = -2

Query: 771 DDYKVIRYVSFTDLSYYDVARLGLSWDDVPWENRYYEPIWEIYSLRSNSWRKLDANIPTP 592
           DDYKVIR+  F   + +  + +      VP E R    +WE+YSLRS SWRKL+ ++  P
Sbjct: 171 DDYKVIRHAEFHQRNAFAGSLIV-----VPLERRQ---VWEMYSLRSESWRKLNVDM-LP 221

Query: 591 HSRSTIYFRVYLDGMCHWWNEGITMPRKDHGAYLVSFDLGNEVFCITPRPXXXXXXXXXX 412
            +R      VY+DG+CHWW           G  LVSF+L +EV   TP P          
Sbjct: 222 CNRRNAGAEVYMDGVCHWWGYAYD------GPCLVSFNLSSEVILTTPIPLDMDESF--- 272

Query: 411 FEWLHRHLVVLNGSIALISNYEKTTTFHISILGEIGVKESWTKLFIVGPLPFIEHPIGVG 232
            EW+ RHL VLN SIA+IS++     FHIS+LGE+GVKESW KLF+VGPLP +  P+GVG
Sbjct: 273 -EWMERHLAVLNMSIAIISHHANKNYFHISVLGELGVKESWIKLFVVGPLPCVHRPVGVG 331

Query: 231 KKGNVFFRKKDNELVWFDLSTQMTRELGVKGGSFSCQIVIYKENLLPIGGINN 73
           KKG++FF K+D+E++  +LS  M +E+GVK   F CQIVIYK N LPIG +NN
Sbjct: 332 KKGDIFFIKEDSEVICLNLSNGMIKEIGVKEDLFRCQIVIYKPNFLPIGRLNN 384



 Score = 91.3 bits (225), Expect(2) = 3e-73
 Identities = 49/96 (51%), Positives = 60/96 (62%)
 Frame = -3

Query: 1121 HATLYSLSGERYESRVKLDWPSVDWPSPFLDDDIERNIFILGCVNGTLCLSAVTSEEKRV 942
            H  LY LSGE +E++V L+WP      PF  DDI+ +I   G +NGTLCL       + +
Sbjct: 81   HCALYLLSGENFENKVILNWPP-----PFQADDIDMDILGSG-INGTLCLHRY---HRTI 131

Query: 941  VLWNPATEEFKVIPPSPVDSIPYQNVYVFLHGFGYD 834
            VLWNP   EFKVIPPSP+DS  +    V LHGFGYD
Sbjct: 132  VLWNPTIGEFKVIPPSPIDSQLHDPTSVTLHGFGYD 167


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