BLASTX nr result

ID: Glycyrrhiza24_contig00007664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007664
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39587.1| unknown [Lotus japonicus]                              115   4e-24
gb|AFK34654.1| unknown [Lotus japonicus]                              112   4e-23
gb|AFK34323.1| unknown [Lotus japonicus]                              111   1e-22
ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G...   110   2e-22
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat...   108   7e-22

>gb|AFK39587.1| unknown [Lotus japonicus]
          Length = 96

 Score =  115 bits (289), Expect = 4e-24
 Identities = 53/68 (77%), Positives = 60/68 (88%)
 Frame = -3

Query: 312 PLAQPSCFSFRLK*GENVSLPHWSFHVPHDVSVLIIQKLHSDLSHLSSRPSTTHHFDNNS 133
           PLAQPS FSFRLK GENV  PHW+FHVPHDV++L+IQKL+SDLS L+S  STTH+FDNNS
Sbjct: 4   PLAQPSGFSFRLKKGENVPFPHWTFHVPHDVTILVIQKLNSDLSDLTSGSSTTHNFDNNS 63

Query: 132 MLHLRFHP 109
           MLHLR HP
Sbjct: 64  MLHLRLHP 71


>gb|AFK34654.1| unknown [Lotus japonicus]
          Length = 71

 Score =  112 bits (281), Expect = 4e-23
 Identities = 50/68 (73%), Positives = 60/68 (88%)
 Frame = -3

Query: 312 PLAQPSCFSFRLK*GENVSLPHWSFHVPHDVSVLIIQKLHSDLSHLSSRPSTTHHFDNNS 133
           PLAQPSCFS RL+ GE+V+ P WSF VPHDV++L+IQKL SDLSHL+ RPST H+FD++S
Sbjct: 4   PLAQPSCFSLRLEKGEDVTFPDWSFDVPHDVTILVIQKLDSDLSHLTPRPSTAHNFDHDS 63

Query: 132 MLHLRFHP 109
           MLHLRFHP
Sbjct: 64  MLHLRFHP 71


>gb|AFK34323.1| unknown [Lotus japonicus]
          Length = 71

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = -3

Query: 312 PLAQPSCFSFRLK*GENVSLPHWSFHVPHDVSVLIIQKLHSDLSHLSSRPSTTHHFDNNS 133
           PLAQPSCFS RL+ GE+V+ P WSF VPHDV++L+IQKL SDLSHL+ RPST H+FD++ 
Sbjct: 4   PLAQPSCFSLRLEKGEDVTFPDWSFDVPHDVTILVIQKLDSDLSHLTPRPSTAHNFDHDG 63

Query: 132 MLHLRFHP 109
           MLHLRFHP
Sbjct: 64  MLHLRFHP 71


>ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
          Length = 105

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = +1

Query: 106 IRMESQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 270
           IRMESQVKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT
Sbjct: 39  IRMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 93


>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
           gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
           [Medicago truncatula]
          Length = 75

 Score =  108 bits (270), Expect = 7e-22
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 109 RMESQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 270
           RMESQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT
Sbjct: 10  RMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 63


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