BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007627
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   132   2e-29
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...   126   2e-27
gb|AFK41205.1| unknown [Lotus japonicus]                              123   2e-26
gb|AFK43436.1| unknown [Medicago truncatula]                          121   5e-26
ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 ...   121   5e-26

>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = -1

Query: 407 LFEVSESKRLPAEKLNLLISYVLVLTLFSDDFRTNYTDIAKDLKMSSVLLRQLYLHLGCK 228
           +F VSESKRLP EK++LLI YVLVLTLFSD+FRT+YTDIAKDL M+ + +RQLY HLGCK
Sbjct: 337 MFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPVRQLYEHLGCK 396

Query: 227 ISSQKRISYATLPVPLKFPDLRIKNRKR 144
           IS QK I YATLPVPLKFP+LR + RKR
Sbjct: 397 ISRQKNIFYATLPVPLKFPELRQRKRKR 424


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 412

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/87 (66%), Positives = 76/87 (87%)
 Frame = -1

Query: 407 LFEVSESKRLPAEKLNLLISYVLVLTLFSDDFRTNYTDIAKDLKMSSVLLRQLYLHLGCK 228
           +F+VSES+RLP EKLNLLISYVLVLTLFSDDFRT+Y DIAKDL+M+++ LR ++ HLGCK
Sbjct: 321 MFDVSESRRLPPEKLNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCK 380

Query: 227 ISSQKRISYATLPVPLKFPDLRIKNRK 147
           + S +++SYATLP+PL FP +R + +K
Sbjct: 381 LISSQKVSYATLPIPLTFPQIRQRKKK 407


>gb|AFK41205.1| unknown [Lotus japonicus]
          Length = 347

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/88 (68%), Positives = 74/88 (84%)
 Frame = -1

Query: 407 LFEVSESKRLPAEKLNLLISYVLVLTLFSDDFRTNYTDIAKDLKMSSVLLRQLYLHLGCK 228
           +F  +ES+RLP ++LNLLI YVLVLTLFSD+FRT+YTDI+KDL+MS +L+RQ Y  LGCK
Sbjct: 260 MFGATESRRLPNDELNLLICYVLVLTLFSDEFRTDYTDISKDLRMSVLLVRQHYSDLGCK 319

Query: 227 ISSQKRISYATLPVPLKFPDLRIKNRKR 144
             SQ +ISYATLPVPLKFPD + + RKR
Sbjct: 320 FLSQNKISYATLPVPLKFPDSKQRKRKR 347


>gb|AFK43436.1| unknown [Medicago truncatula]
          Length = 263

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/88 (65%), Positives = 76/88 (86%)
 Frame = -1

Query: 407 LFEVSESKRLPAEKLNLLISYVLVLTLFSDDFRTNYTDIAKDLKMSSVLLRQLYLHLGCK 228
           +F+V+ES+RLP EK+NLLISYVLVLTLFSDDFRT+Y DIAKDL+M+++ LR ++ HLGCK
Sbjct: 172 MFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCK 231

Query: 227 ISSQKRISYATLPVPLKFPDLRIKNRKR 144
           + S +++SYATLP+PL F   +IK RKR
Sbjct: 232 LISSQKVSYATLPIPLTF--FQIKKRKR 257


>ref|XP_003595059.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484107|gb|AES65310.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 263

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/87 (63%), Positives = 75/87 (86%)
 Frame = -1

Query: 407 LFEVSESKRLPAEKLNLLISYVLVLTLFSDDFRTNYTDIAKDLKMSSVLLRQLYLHLGCK 228
           +F+V+ES+RLP EK+NLLISYVLVLTLFSDDFRT+Y DIAKDL+M+++ LR ++ HLGCK
Sbjct: 172 MFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCK 231

Query: 227 ISSQKRISYATLPVPLKFPDLRIKNRK 147
           + S +++SYATLP+PL F  ++ + RK
Sbjct: 232 LISSQKVSYATLPIPLTFSQIKKRKRK 258