BLASTX nr result

ID: Glycyrrhiza24_contig00007614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007614
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicag...   413   e-113
ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like ...   380   e-103
ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like ...   380   e-103
ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Viti...   296   5e-78
gb|ACU18433.1| unknown [Glycine max]                                  296   5e-78

>ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355479581|gb|AES60784.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 291

 Score =  413 bits (1062), Expect = e-113
 Identities = 206/291 (70%), Positives = 231/291 (79%), Gaps = 4/291 (1%)
 Frame = +2

Query: 56  MAVEQXXXXXSTRLRNLLTFPQNPNSTPKFQVPFPCWRTTQPW--KLKLKCSSDSMTNTA 229
           MA+EQ     STR RNL TFPQNPN  PKF++PF    +++P      LKCS+    N A
Sbjct: 1   MALEQTVSLSSTRFRNLTTFPQNPNFIPKFKLPFSTTLSSKPIHRNFNLKCSNSITNNGA 60

Query: 230 ASPPKPSEIPWQKELCNSVNLIGFVAAPVEVKNFPSGKVLAWTRLSVKKNPTQTSFIHLT 409
           AS PKP EI W K+L NSVNLIGFVA P+E+K+ PSGKV+AWTRLSVKKN +Q S+IHLT
Sbjct: 61  ASYPKPPEISWNKDLSNSVNLIGFVANPIEIKHLPSGKVVAWTRLSVKKNASQMSWIHLT 120

Query: 410 FWDDLAHVASHHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLAPVSS 589
           FWD+LAHVAS HVQKGHQIHVSGRLVTDTV++ +G            LNFIDRS +PV S
Sbjct: 121 FWDELAHVASQHVQKGHQIHVSGRLVTDTVDSVDGKQQTYYKVVAQQLNFIDRSDSPVRS 180

Query: 590 HDQDSDF-TIADSGRKVSYAANS-TGSVVELWQAFFANPGEWWDNRKTKRNPKAPDFKHK 763
           HDQD DF T  D+G+K SYA N  TGSVVELWQAFFANPGEWWDNR+ KRNPKAPDFKHK
Sbjct: 181 HDQDFDFITSDDNGKKASYATNGMTGSVVELWQAFFANPGEWWDNRRNKRNPKAPDFKHK 240

Query: 764 DTGEALWIDGRSNPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 916
           DTGEALWIDGRS PPWVKSQLEILDMRMGS+ GQNGRMPVDMV+ADE+LSF
Sbjct: 241 DTGEALWIDGRSTPPWVKSQLEILDMRMGSYTGQNGRMPVDMVSADEMLSF 291


>ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 292

 Score =  380 bits (977), Expect = e-103
 Identities = 200/294 (68%), Positives = 224/294 (76%), Gaps = 7/294 (2%)
 Frame = +2

Query: 56  MAVEQXXXXXSTRLRNLLTFPQNPNSTPKFQVPF-PCWRTTQP-WK----LKLKCSSDSM 217
           M +EQ     ST LRN+ T P+   S P+FQV   P W+  QP W+    + LKCS  + 
Sbjct: 1   MVLEQAVSSSST-LRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT- 58

Query: 218 TNTAASPPKPSEIPWQKELCNSVNLIGFVAAPVEVKNFPSGKVLAWTRLSVKKNPTQTSF 397
           T T +S PKPSEIPWQKELCNSVNLIG VAAPVE+K  PSGKV+AWTRL VKK+ TQ+S 
Sbjct: 59  TTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSP 118

Query: 398 IHLTFWDDLAHVASHHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLA 577
           I+LTFWDDLAHVAS H+QKGHQIHVSGRL+TDTVET+EG            LNFI+R+ +
Sbjct: 119 INLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFS 178

Query: 578 PVSSHD-QDSDFTIADSGRKVSYAANSTGSVVELWQAFFANPGEWWDNRKTKRNPKAPDF 754
            VSS   Q+ DF +A SGRKVS AANSTGSVVE W AFFANPGEWWDNR  KRNPKAPDF
Sbjct: 179 SVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPKAPDF 238

Query: 755 KHKDTGEALWIDGRSNPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 916
           KHKDTGEALWI+GR NPPWVKSQLEILD RMGS A QN RMPV MV ADEI+SF
Sbjct: 239 KHKDTGEALWIEGRYNPPWVKSQLEILDSRMGSFASQNARMPVGMVAADEIVSF 292


>ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 284

 Score =  380 bits (975), Expect = e-103
 Identities = 195/289 (67%), Positives = 219/289 (75%), Gaps = 2/289 (0%)
 Frame = +2

Query: 56  MAVEQXXXXXSTRLRNLLTFPQNPNSTPKFQVPF-PCWRTTQPWKLKLKCSSDSMTNTAA 232
           MA+EQ     S+ LRN+LTFP+   S P+FQV   P W+T + W   LKCS      T  
Sbjct: 1   MALEQAVSSSSSTLRNVLTFPKTLISKPQFQVAASPSWKTQRRWG-NLKCSM----TTTP 55

Query: 233 SPPKPSEIPWQKELCNSVNLIGFVAAPVEVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTF 412
           S PKPSEIPWQKELCNSVNLIG VAAPVE+K+ PSGKV+AWTRL VKK+ TQ+S I LTF
Sbjct: 56  SYPKPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSSISLTF 115

Query: 413 WDDLAHVASHHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLAPVSSH 592
           WDDLAHVAS H+QKG+QIHVSGRL+ DTVET+EG            LNFI+R+ +  SS 
Sbjct: 116 WDDLAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFSSASSS 175

Query: 593 D-QDSDFTIADSGRKVSYAANSTGSVVELWQAFFANPGEWWDNRKTKRNPKAPDFKHKDT 769
             Q+ DF +A  GRKVS A NSTGSVVE W AFFANPGEWWDNR  KRNPKAPDFKHKDT
Sbjct: 176 QGQEFDFAMAGGGRKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDFKHKDT 235

Query: 770 GEALWIDGRSNPPWVKSQLEILDMRMGSHAGQNGRMPVDMVTADEILSF 916
           GEALWI+GR +PPWVKSQLEILD RMGS AGQN RMPV MV ADEI+SF
Sbjct: 236 GEALWIEGRYSPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVSF 284


>ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
          Length = 292

 Score =  296 bits (759), Expect = 5e-78
 Identities = 147/261 (56%), Positives = 187/261 (71%), Gaps = 6/261 (2%)
 Frame = +2

Query: 152 PFPCWRTTQPWKLKLKCS-----SDSMTNTAASPPKPSEIPWQKELCNSVNLIGFVAAPV 316
           P P + +    K +L+CS     ++   N A S P+PSE+PW+KELCNSV+LIG V APV
Sbjct: 32  PNPFFSSLPQPKTQLRCSIICNYNNDHHNQAVSYPRPSEVPWKKELCNSVSLIGIVGAPV 91

Query: 317 EVKNFPSGKVLAWTRLSVKKNPTQTSFIHLTFWDDLAHVASHHVQKGHQIHVSGRLVTDT 496
           E+K+  SGKVLAWTRL+V+K+ + T++I+LTFWD+LAHVAS HV+KG QI+VSGRLV+DT
Sbjct: 92  EIKHLSSGKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDT 151

Query: 497 VETDEGXXXXXXXXXXXXLNFIDRSLAPVSSHDQDSDFTIADSGRKV-SYAANSTGSVVE 673
           VE DEG            LNF++RS +     +  +      SGRK+ S A NSTGS+ E
Sbjct: 152 VENDEGKQQTYYKVVVQQLNFVERSFSSADESNSLAAGNSTFSGRKLGSPATNSTGSIEE 211

Query: 674 LWQAFFANPGEWWDNRKTKRNPKAPDFKHKDTGEALWIDGRSNPPWVKSQLEILDMRMGS 853
           LWQAFFANP +WWDNRKTK+NPK PDFKHKDTGEALW++GR NP WVKSQL ILD RM S
Sbjct: 212 LWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSRMES 271

Query: 854 HAGQNGRMPVDMVTADEILSF 916
              Q+ RM V+++  D+ + F
Sbjct: 272 FRDQDARMHVNLMAGDDFMPF 292


>gb|ACU18433.1| unknown [Glycine max]
          Length = 242

 Score =  296 bits (759), Expect = 5e-78
 Identities = 158/244 (64%), Positives = 181/244 (74%), Gaps = 7/244 (2%)
 Frame = +2

Query: 56  MAVEQXXXXXSTRLRNLLTFPQNPNSTPKFQVPF-PCWRTTQP-WK----LKLKCSSDSM 217
           M +EQ     ST LRN+ T P+   S P+FQV   P W+  QP W+    + LKCS  + 
Sbjct: 1   MVLEQAVSSSST-LRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT- 58

Query: 218 TNTAASPPKPSEIPWQKELCNSVNLIGFVAAPVEVKNFPSGKVLAWTRLSVKKNPTQTSF 397
           T T +S PKPSEIPWQKELCNSVNLIG VAAPVE+K  PSGKV+AWTRL VKK+ TQ+S 
Sbjct: 59  TTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSP 118

Query: 398 IHLTFWDDLAHVASHHVQKGHQIHVSGRLVTDTVETDEGXXXXXXXXXXXXLNFIDRSLA 577
           I+LTFWDDLAHVAS H+QKGHQIHVSGRL+TDTVET+EG            LNFI+R+ +
Sbjct: 119 INLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFS 178

Query: 578 PV-SSHDQDSDFTIADSGRKVSYAANSTGSVVELWQAFFANPGEWWDNRKTKRNPKAPDF 754
            V SS  Q+ DF +A SGRKVS AANSTGSVVE W AFFANPGEWWDNR  KRNP+APDF
Sbjct: 179 SVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPEAPDF 238

Query: 755 KHKD 766
           KHKD
Sbjct: 239 KHKD 242


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