BLASTX nr result

ID: Glycyrrhiza24_contig00007574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007574
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603765.1| Tubulin beta chain [Medicago truncatula] gi|...   255   e-115
gb|AFK44728.1| unknown [Medicago truncatula]                          255   e-115
gb|ACJ84273.1| unknown [Medicago truncatula]                          255   e-115
gb|ACJ85447.1| unknown [Medicago truncatula]                          255   e-115
ref|XP_003523477.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   255   e-114

>ref|XP_003603765.1| Tubulin beta chain [Medicago truncatula]
           gi|355492813|gb|AES74016.1| Tubulin beta chain [Medicago
           truncatula] gi|388513289|gb|AFK44706.1| unknown
           [Medicago truncatula]
          Length = 450

 Score =  255 bits (651), Expect(2) = e-115
 Identities = 134/182 (73%), Positives = 135/182 (74%)
 Frame = +3

Query: 342 EGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTF 521
           EGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTF
Sbjct: 110 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 169

Query: 522 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRXXXXXXXXXXXXXX 701
           SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR              
Sbjct: 170 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR-------------- 215

Query: 702 XXXXXXXXXXXXXXXXXXXNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 881
                              NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF
Sbjct: 216 -------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 268

Query: 882 MV 887
           MV
Sbjct: 269 MV 270



 Score =  188 bits (478), Expect(2) = e-115
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   CDEHGIDPTGKYVSQGGNEVQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 180
           CDEHGIDPTGKYVS+GGN+ QLERINVYYNEASGGRYVPRAVLMDLEPGTM+SIRSGP+G
Sbjct: 25  CDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFG 84

Query: 181 KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 273
           KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI
Sbjct: 85  KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 115


>gb|AFK44728.1| unknown [Medicago truncatula]
          Length = 406

 Score =  255 bits (651), Expect(2) = e-115
 Identities = 134/182 (73%), Positives = 135/182 (74%)
 Frame = +3

Query: 342 EGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTF 521
           EGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTF
Sbjct: 110 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 169

Query: 522 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRXXXXXXXXXXXXXX 701
           SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR              
Sbjct: 170 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR-------------- 215

Query: 702 XXXXXXXXXXXXXXXXXXXNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 881
                              NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF
Sbjct: 216 -------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 268

Query: 882 MV 887
           MV
Sbjct: 269 MV 270



 Score =  188 bits (478), Expect(2) = e-115
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   CDEHGIDPTGKYVSQGGNEVQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 180
           CDEHGIDPTGKYVS+GGN+ QLERINVYYNEASGGRYVPRAVLMDLEPGTM+SIRSGP+G
Sbjct: 25  CDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFG 84

Query: 181 KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 273
           KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI
Sbjct: 85  KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 115


>gb|ACJ84273.1| unknown [Medicago truncatula]
          Length = 406

 Score =  255 bits (651), Expect(2) = e-115
 Identities = 134/182 (73%), Positives = 135/182 (74%)
 Frame = +3

Query: 342 EGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTF 521
           EGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTF
Sbjct: 110 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 169

Query: 522 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRXXXXXXXXXXXXXX 701
           SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR              
Sbjct: 170 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR-------------- 215

Query: 702 XXXXXXXXXXXXXXXXXXXNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 881
                              NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF
Sbjct: 216 -------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 268

Query: 882 MV 887
           MV
Sbjct: 269 MV 270



 Score =  188 bits (478), Expect(2) = e-115
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   CDEHGIDPTGKYVSQGGNEVQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 180
           CDEHGIDPTGKYVS+GGN+ QLERINVYYNEASGGRYVPRAVLMDLEPGTM+SIRSGP+G
Sbjct: 25  CDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFG 84

Query: 181 KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 273
           KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI
Sbjct: 85  KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 115


>gb|ACJ85447.1| unknown [Medicago truncatula]
          Length = 296

 Score =  255 bits (651), Expect(2) = e-115
 Identities = 134/182 (73%), Positives = 135/182 (74%)
 Frame = +3

Query: 342 EGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTF 521
           EGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTF
Sbjct: 110 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 169

Query: 522 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRXXXXXXXXXXXXXX 701
           SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR              
Sbjct: 170 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR-------------- 215

Query: 702 XXXXXXXXXXXXXXXXXXXNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 881
                              NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF
Sbjct: 216 -------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 268

Query: 882 MV 887
           MV
Sbjct: 269 MV 270



 Score =  188 bits (478), Expect(2) = e-115
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +1

Query: 1   CDEHGIDPTGKYVSQGGNEVQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 180
           CDEHGIDPTGKYVS+GGN+ QLERINVYYNEASGGRYVPRAVLMDLEPGTM+SIRSGP+G
Sbjct: 25  CDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFG 84

Query: 181 KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 273
           KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI
Sbjct: 85  KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 115


>ref|XP_003523477.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 449

 Score =  255 bits (651), Expect(2) = e-114
 Identities = 134/182 (73%), Positives = 135/182 (74%)
 Frame = +3

Query: 342 EGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTF 521
           EGAELID+VLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTF
Sbjct: 110 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 169

Query: 522 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRXXXXXXXXXXXXXX 701
           SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR              
Sbjct: 170 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR-------------- 215

Query: 702 XXXXXXXXXXXXXXXXXXXNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 881
                              NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF
Sbjct: 216 -------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 268

Query: 882 MV 887
           MV
Sbjct: 269 MV 270



 Score =  183 bits (465), Expect(2) = e-114
 Identities = 84/91 (92%), Positives = 87/91 (95%)
 Frame = +1

Query: 1   CDEHGIDPTGKYVSQGGNEVQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 180
           CDEHGIDPTGKY  +G + +QLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG
Sbjct: 25  CDEHGIDPTGKYNEEGNSSIQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYG 84

Query: 181 KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 273
           KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI
Sbjct: 85  KIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 115


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