BLASTX nr result

ID: Glycyrrhiza24_contig00007556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007556
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537333.1| PREDICTED: structure-specific endonuclease s...   399   e-109
gb|ACU18730.1| unknown [Glycine max]                                  209   3e-55
ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...   196   6e-48
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...   191   2e-46
emb|CBI15837.3| unnamed protein product [Vitis vinifera]              181   3e-43

>ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
           [Glycine max]
          Length = 380

 Score =  399 bits (1024), Expect = e-109
 Identities = 201/288 (69%), Positives = 231/288 (80%), Gaps = 9/288 (3%)
 Frame = +2

Query: 8   PTNISALQFEWAWQHPVESLAVRKAAVGFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 187
           PTN+SALQFEWAWQHPVESLAVRKAAV FKSLSGIANKIKLAYTMLTLPSWQSMNITVNF
Sbjct: 94  PTNVSALQFEWAWQHPVESLAVRKAAVEFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 153

Query: 188 FSTKYTKHCAGCPNLPDHMKVEIGSMDELPCYTERIAGWSENEDDSIDEVEFGNNTSSTS 367
           FSTKY KHCAGCP+LP HMK + GS+DELPCY + I G SENEDD+IDEV+F +N  STS
Sbjct: 154 FSTKYMKHCAGCPSLPVHMKTKFGSLDELPCYNKGIDGLSENEDDTIDEVQFDDNNISTS 213

Query: 368 GSVPDASDDSITPDSPKNPNHTDNITEPFAWNKESKAREPP-SHSFPPQKQSEPFGSITS 544
           GSVPD SDD +TPDSP+NPN  D I+E F WNKES+AREPP  +SF  Q+QS+ F S T+
Sbjct: 214 GSVPDVSDDLVTPDSPQNPNDGDKISEAFEWNKESEAREPPLGNSFASQEQSQLFSS-TT 272

Query: 545 PIVRSSSPATSVERVGVIEDMDFTSLMNKGNDELSQQDCEQSGAI--------GVSGAFI 700
           P+   SS  TS++R  +IE+ DF S+MNK + +LSQ + EQSGA          V   F+
Sbjct: 273 PLTMKSSSTTSLQRAEIIEEDDFMSVMNKSDADLSQPEPEQSGATTLVANKNRDVGRTFV 332

Query: 701 VPHEAELIDLSTPSPSCRSVIDRKKRIVSSSVRADFIDLTKSPNFVQL 844
           VPHE E+IDLSTPSPSCRSV+DRKKR VSSSV  DFIDLT SPNF++L
Sbjct: 333 VPHETEIIDLSTPSPSCRSVLDRKKRRVSSSVGTDFIDLTNSPNFIEL 380


>gb|ACU18730.1| unknown [Glycine max]
          Length = 197

 Score =  209 bits (533), Expect(2) = 3e-55
 Identities = 112/179 (62%), Positives = 132/179 (73%), Gaps = 7/179 (3%)
 Frame = +2

Query: 329 DEVEFGNNTSSTSGSVPDASDDSITPDSPKNPNHTDNITEPFAWNKESKAREPPSHSFPP 508
           DEVEF NNTS TSGSVPD  DD +TPDSP NPNH D I+E F WNKES+ R+P  +SF  
Sbjct: 22  DEVEFNNNTS-TSGSVPDVGDDFVTPDSPGNPNHRDKISEAFEWNKESEVRQPLGNSFSS 80

Query: 509 QKQSEPFGSITSPIVRSSSPATSVERVGVIEDMDFTSLMNKGNDELSQQDCEQSGAIG-- 682
           Q+QS+PF S T+P+   SS  TS+ RV +IED DF S++NK   +L Q + EQSGA    
Sbjct: 81  QEQSQPFSS-TTPLTMKSSSTTSLHRVDIIED-DFMSVINKSGADLIQPEPEQSGATSAA 138

Query: 683 -----VSGAFIVPHEAELIDLSTPSPSCRSVIDRKKRIVSSSVRADFIDLTKSPNFVQL 844
                +S  F+VP+EAE+IDLSTPSPSCRSV+DRKKR VSSSV  DFIDLT SPNFVQL
Sbjct: 139 NKNHDISHTFVVPNEAEIIDLSTPSPSCRSVLDRKKRRVSSSVGTDFIDLTNSPNFVQL 197



 Score = 33.1 bits (74), Expect(2) = 3e-55
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +3

Query: 267 MNFHVIPKELLVGQRMKMIV 326
           MNFHVI K L+V QRMKMI+
Sbjct: 1   MNFHVIMKALMVCQRMKMII 20


>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score =  196 bits (499), Expect = 6e-48
 Identities = 132/304 (43%), Positives = 166/304 (54%), Gaps = 27/304 (8%)
 Frame = +2

Query: 8   PTNISALQFEWAWQHPVESLAVRKAAVGFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 187
           PTN+SALQFEWAWQHP ESLAVRKAA GFKSLSGIANKIKLAYTM TLP+WQS+N+TVNF
Sbjct: 83  PTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNF 142

Query: 188 FSTKYTKHCAGCPNLPDHMKVEIGSMDELPCYTERIAGWSENEDDSIDEVEFGNNTSSTS 367
           FSTKYTKH AGCP LP+HM+V++  MDELPCY+     + +N     ++ E G       
Sbjct: 143 FSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSGSDQSFFDNARGD-EKEELGER----- 196

Query: 368 GSVPDASDDSITPDSPKNPNHTDNITEPFAW-----------------------NKESKA 478
           GS  D  D  I         H +   E F W                        +E+  
Sbjct: 197 GSSSDGFDQVIA--------HEETALEQFGWIEEHGLRQPGDSPSPEVVHCSGKTQENAM 248

Query: 479 REPPSHSFPPQKQSEPFGSITSPIVRSSSPATSVERVGVIEDMDFTSLMNKGNDELSQQD 658
           R+P   S    +   PF  I SP VR+SS +T     G + D D TS ++K N  L+ + 
Sbjct: 249 RQPADLSTSKDEHRSPFCLIDSP-VRTSSHSTE----GTL-DKD-TSGLSKENKVLTMKQ 301

Query: 659 CEQSGAIGVS----GAFIVPHEAELIDLSTPSPSCRSVIDRKKRIVSSSVRADFIDLTKS 826
              + A         +     E E+IDL + SP  R+    KKR  +++V  + IDLT S
Sbjct: 302 LPATVAADRGKPKISSLDTSCEIEVIDLLSCSPDYRTNPCFKKR-RATTVHPEIIDLTNS 360

Query: 827 PNFV 838
           P FV
Sbjct: 361 PIFV 364


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
            gi|449471301|ref|XP_004153269.1| PREDICTED:
            uncharacterized protein LOC101204996 [Cucumis sativus]
            gi|449506301|ref|XP_004162709.1| PREDICTED:
            uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score =  191 bits (486), Expect = 2e-46
 Identities = 119/309 (38%), Positives = 164/309 (53%), Gaps = 30/309 (9%)
 Frame = +2

Query: 8    PTNISALQFEWAWQHPVESLAVRKAAVGFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 187
            PTN+SALQFEWAWQHP ESLAVR AA  FKSLSG+ANK+KLAYTMLTLP+W+ +NITVN+
Sbjct: 92   PTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWRGLNITVNY 151

Query: 188  FSTKYTKHCAGCPNLPDHMKVEIGSMDELPCYTERIAGWSENEDD--------SIDEVEF 343
            FSTK+ K+ AGCP+LP+HMKV++  ++ELPCY+E      ENE D         I     
Sbjct: 152  FSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEGDQDMLENEGDWEYNREREEICGFRV 211

Query: 344  GNNTSSTSGSVPDASDDSITPDSPKNPNHTDNITEPFAWNKESKAREPPSHSFPPQ---K 514
              +    S  VP    D  T    + P+      +      E+  + PPS   P      
Sbjct: 212  YGSMKEVSNEVPQKLMDYQTGTDGRPPHVLRGCDKEL----ETNEQVPPSSCTPSYIDVG 267

Query: 515  QSEPFGSITSPIVRSSSPATS---------VERVGVIEDMDFTSLMNKGNDELSQQDCEQ 667
             S    +    +      A S           R  ++ D +  + +   +  L +Q   +
Sbjct: 268  MSYDLCACDEGLENDEREAASCGQSCIVAGTSRTEIVIDDEEENQLEGSSMNLQEQPGRE 327

Query: 668  SGAIGV----------SGAFIVPHEAELIDLSTPSPSCRSVIDRKKRIVSSSVRADFIDL 817
            +   G+          +  ++   E E+ID+STPSP CR+   R KR V+S  +++ IDL
Sbjct: 328  NLTSGIASEISKVSRWNNGWVPTVEYEVIDVSTPSPDCRTSSHRFKRRVTSG-KSEMIDL 386

Query: 818  TKSPNFVQL 844
            TKSP F+QL
Sbjct: 387  TKSPTFIQL 395


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  181 bits (459), Expect = 3e-43
 Identities = 93/166 (56%), Positives = 109/166 (65%)
 Frame = +2

Query: 8   PTNISALQFEWAWQHPVESLAVRKAAVGFKSLSGIANKIKLAYTMLTLPSWQSMNITVNF 187
           PTN+SALQFEWAWQHP ESLAVRKAA GFKSLSGIANKIKLAYTM TLP+WQS+N+TVNF
Sbjct: 83  PTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLNLTVNF 142

Query: 188 FSTKYTKHCAGCPNLPDHMKVEIGSMDELPCYTERIAGWSENEDDSIDEVEFGNNTSSTS 367
           FSTKYTKH AGCP LP+HM+V++  MDELPCY+     + +N     ++ E G       
Sbjct: 143 FSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSGSDQSFFDNARGD-EKEELGER----- 196

Query: 368 GSVPDASDDSITPDSPKNPNHTDNITEPFAWNKESKAREPPSHSFP 505
           GS  D  D  I         H +   E F W +E   R+P     P
Sbjct: 197 GSSSDGFDQVIA--------HEETALEQFGWIEEHGLRQPGDSPSP 234


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