BLASTX nr result
ID: Glycyrrhiza24_contig00007554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00007554
(630 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu... 324 9e-87
ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig... 314 7e-84
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2... 305 4e-81
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ... 299 3e-79
ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ... 299 3e-79
>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 393
Score = 324 bits (830), Expect = 9e-87
Identities = 154/175 (88%), Positives = 165/175 (94%)
Frame = +2
Query: 2 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 181
NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
Query: 182 GDSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 361
GD+DKSSKMVPQ+V LLAGEDIV Q+SCGGTHSVALT+DGRMFSFGRGDHGRLGYG
Sbjct: 284 GDNDKSSKMVPQKVNLLAGEDIV-----QLSCGGTHSVALTQDGRMFSFGRGDHGRLGYG 338
Query: 362 RKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVEWKVDESK 526
+KVTTGQP+EVP +IPPP +LSG+ AEGHWIAKLVACGGRHTLA+VEWKVDESK
Sbjct: 339 KKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVEWKVDESK 393
Score = 75.1 bits (183), Expect = 1e-11
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Frame = +2
Query: 2 NEYGQLG-TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 178
N+ G LG +T+ + P V+ L+ + +V A GGWH A+ D+G Y WG E+G+ G
Sbjct: 65 NQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 179 FGDSDKSSKMVPQRVQLLAGEDIVGEDIV-QVSCGGTHSVALTRDGRMFSFGRGDHGRLG 355
K R ++ + + +V QV+ GGTHSV LTR+G ++
Sbjct: 125 EEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVW----------- 173
Query: 356 YGRKVTTGQPMEVPINIPPP---HNLSGSAAAEGHWIAKLVACGGRHTLAMVE 505
T GQP PP +S +G KL+A G H LA+ E
Sbjct: 174 -----TWGQPW-------PPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQE 214
Score = 67.4 bits (163), Expect = 2e-09
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Frame = +2
Query: 5 EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFG 184
E GQLG G + + V L + + AG +S A+ D+G+++ WG + G LG
Sbjct: 14 EDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGH- 72
Query: 185 DSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGY-- 358
++ ++ +P +V+ L +IVQ + GG H +A+ GR +++G ++G+ G
Sbjct: 73 PAETKTENIPSQVKALN-----NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 127
Query: 359 GRKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAM 499
RK TG+ + I IP + + VA GG H++ +
Sbjct: 128 ERKDDTGKTLRRDIVIP--------QRCAPKLVVRQVAAGGTHSVVL 166
>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 314 bits (805), Expect = 7e-84
Identities = 154/174 (88%), Positives = 161/174 (92%)
Frame = +2
Query: 2 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 181
NEYGQLGTGDTQPRSQPI VQGLS LTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF
Sbjct: 228 NEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 287
Query: 182 GDSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 361
GDSDKSSKMVPQ+VQLLA GEDIVQVSCGGTHSVALTRDG MFSFGRGDHGRLGYG
Sbjct: 288 GDSDKSSKMVPQKVQLLA-----GEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYG 342
Query: 362 RKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVEWKVDES 523
RKVTTGQPMEVPI++PPP + SG+ A EGHWIAKLVACGGRHTLA+VEWK +ES
Sbjct: 343 RKVTTGQPMEVPIDLPPPQDPSGT-ATEGHWIAKLVACGGRHTLAIVEWKSNES 395
Score = 72.4 bits (176), Expect = 6e-11
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = +2
Query: 29 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKM 208
+ + + P V+ LS + +V A GGWH A+ D+G Y WG E+G+ G K
Sbjct: 79 ENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTG 138
Query: 209 VPQRVQLLAGEDIVGEDIV-QVSCGGTHSVALTRDGRMFSFGR----GDHGRLGYGRKVT 373
P R + + + +V QV+ GGTHSV LTR+G ++++G+ GD
Sbjct: 139 RPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---------- 188
Query: 374 TGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVE 505
+ + VP+ + N+ +L+A G H LA+ E
Sbjct: 189 --KQISVPVRVQGLENV------------RLIAVGAFHNLALQE 218
Score = 69.7 bits (169), Expect = 4e-10
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Frame = +2
Query: 5 EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFG 184
E GQLG G + + V+ L + + AG +S A+ D+G+++ WG + LG
Sbjct: 14 EDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRATLGHP 73
Query: 185 DSDKS---SKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLG 355
KS ++ P +V+ L+ IVQ + GG H +A+ GR +++G ++G+ G
Sbjct: 74 AETKSENKTENTPSQVKALS-----SVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128
Query: 356 Y--GRKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAM 499
RK TG+P+ I IP + + VA GG H++ +
Sbjct: 129 EEPERKDGTGRPLRRDIEIP--------QRCAPKLVVRQVAAGGTHSVVL 170
>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
predicted protein [Populus trichocarpa]
Length = 392
Score = 305 bits (781), Expect = 4e-81
Identities = 150/175 (85%), Positives = 158/175 (90%)
Frame = +2
Query: 2 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 181
NEYGQLGTGDTQPRSQPI VQGLSGLTLVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283
Query: 182 GDSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 361
GD+DKSSKMVPQRV LL VGEDIVQVSCGGTHSVALTRDGRM++FGRGDHGRLGYG
Sbjct: 284 GDNDKSSKMVPQRVNLL-----VGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYG 338
Query: 362 RKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVEWKVDESK 526
RKVTTGQPMEVPI+IPPP NL+ S A G WIAKLVA GGRHTLA+VEW +SK
Sbjct: 339 RKVTTGQPMEVPIDIPPPKNLTDSGDA-GRWIAKLVASGGRHTLAIVEWHTGDSK 392
Score = 77.8 bits (190), Expect = 2e-12
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Frame = +2
Query: 2 NEYGQLG-TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 178
N+ G LG +T+ + P V+ L+ + +V A GGWH A+ D+G Y WG E+G+ G
Sbjct: 65 NQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 179 FGDSDKSSKMVPQRVQLLAGEDIVGEDIV-QVSCGGTHSVALTRDGRMFSFGR----GDH 343
K P R ++ + + +V QV+ GGTHSV LTR+G ++S+G+ GD
Sbjct: 125 EEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGDI 184
Query: 344 GRLGYGRKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVE 505
+ + VP+ + +G +L+A G H LA+ E
Sbjct: 185 ------------KQISVPVRV------------QGLERVRLIAVGAFHNLALQE 214
Score = 75.5 bits (184), Expect = 8e-12
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Frame = +2
Query: 5 EYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFG 184
E GQLG G+ + + V+ L + + AG +S A+ D+G+++ WG + G LG
Sbjct: 14 EDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHP 73
Query: 185 DSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGY-- 358
K+ +P +V+ LA +IVQ + GG H +A+ GR +++G ++G+ G
Sbjct: 74 PETKTEN-IPSQVKALA-----NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 127
Query: 359 GRKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAM 499
RK TG+P+ I IP + + VA GG H++ +
Sbjct: 128 ERKDDTGRPLRRDIVIP--------QRCASKLVVRQVAAGGTHSVVL 166
>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 299 bits (765), Expect = 3e-79
Identities = 143/173 (82%), Positives = 154/173 (89%)
Frame = +2
Query: 2 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 181
NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283
Query: 182 GDSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 361
GD+DKSSKMVPQ+VQLL+ GE+IVQ+SCGGTHSVA+T DGRMFSFGRGDHGRLGYG
Sbjct: 284 GDNDKSSKMVPQKVQLLS-----GEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYG 338
Query: 362 RKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVEWKVDE 520
RKVTTGQP EVPI+IPPP GHWIAKLVACGGRHTLA+V+WK ++
Sbjct: 339 RKVTTGQPEEVPIDIPPPR----GRTENGHWIAKLVACGGRHTLALVQWKPED 387
Score = 78.6 bits (192), Expect = 9e-13
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Frame = +2
Query: 2 NEYGQLG-TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 178
N+ G LG T+ + P V+ LS + +V A GGWH A+ D+G Y WG E+G+ G
Sbjct: 65 NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 179 FGDSDKSSKMVPQRVQLLAGEDIVGEDIV-QVSCGGTHSVALTRDGRMFSFGRGDHGRLG 355
K + P R + + + IV QV+ GGTHSV LTR+G ++
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVW----------- 173
Query: 356 YGRKVTTGQPMEVPINIPPPH--NLSGSAAAEGHWIAKLVACGGRHTLAMVE 505
T GQP PP +S +G + +L+A G H LA+ E
Sbjct: 174 -----TWGQPW------PPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQE 214
>ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 299 bits (765), Expect = 3e-79
Identities = 143/173 (82%), Positives = 154/173 (89%)
Frame = +2
Query: 2 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGF 181
NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGF
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGF 283
Query: 182 GDSDKSSKMVPQRVQLLAGEDIVGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYG 361
GD+DKSSKMVPQ+VQLL+ GE+IVQ+SCGGTHSVA+T DGRMFSFGRGDHGRLGYG
Sbjct: 284 GDNDKSSKMVPQKVQLLS-----GEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYG 338
Query: 362 RKVTTGQPMEVPINIPPPHNLSGSAAAEGHWIAKLVACGGRHTLAMVEWKVDE 520
RKVTTGQP EVPI+IPPP GHWIAKLVACGGRHTLA+V+WK ++
Sbjct: 339 RKVTTGQPEEVPIDIPPPR----GRTENGHWIAKLVACGGRHTLALVQWKSED 387
Score = 78.6 bits (192), Expect = 9e-13
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Frame = +2
Query: 2 NEYGQLG-TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 178
N+ G LG T+ + P V+ LS + +V A GGWH A+ D+G Y WG E+G+ G
Sbjct: 65 NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 179 FGDSDKSSKMVPQRVQLLAGEDIVGEDIV-QVSCGGTHSVALTRDGRMFSFGRGDHGRLG 355
K + P R + + + IV QV+ GGTHSV LTR+G ++
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVW----------- 173
Query: 356 YGRKVTTGQPMEVPINIPPPH--NLSGSAAAEGHWIAKLVACGGRHTLAMVE 505
T GQP PP +S +G + +L+A G H LA+ E
Sbjct: 174 -----TWGQPW------PPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQE 214