BLASTX nr result

ID: Glycyrrhiza24_contig00007535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007535
         (1490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   310   5e-82
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              308   2e-81
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]   303   6e-80
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   303   8e-80
ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containi...   288   2e-75

>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13150-like
            [Vitis vinifera]
          Length = 379

 Score =  310 bits (795), Expect = 5e-82
 Identities = 166/381 (43%), Positives = 237/381 (62%)
 Frame = +2

Query: 128  RLRQIFAAKPSIASKPSIAATTTVVHSFHDDDFTTPEGLRNVVESFKKSCENNQFRRRAR 307
            RLR IF +         + ATT           +    L+ +V+ FKKS ++ +FR R  
Sbjct: 7    RLRGIFTSP--------LPATTKTPAKTIKRSSSNNSSLKEMVDKFKKSSDSKRFRSRYG 58

Query: 308  TYGYTVRRLAEAQAYPMIEEIIESQKKYKEISYEGFVVRLISLYGKARMFDHARALFDEM 487
             Y   V  LA+A+ +  IE+I+E QK+Y EIS E F VRL++LYGKA MF+HA  LFDE+
Sbjct: 59   YYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEL 118

Query: 488  PSFNCRRTTNXXXXXXXXXXNAERYDVVHDLFRQLPSQYSFQPDVASYNVVIHAFCKMGS 667
            P  NC RT            N++++D +   F++LP      PDV SYN++++AFC+MGS
Sbjct: 119  PKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS 178

Query: 668  TDSAISMLSEMEELGLKPDWITFNTLIGGFYKQHGYDEAERIWALLRAQNNFVPTVGNYL 847
             DSA+S+L EME++GL+PD ITFNTL+  FY+   Y + E+IW L++ +NN  P V +Y 
Sbjct: 179  LDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMK-KNNVAPNVRSYN 237

Query: 848  LRLGRMVHDGRVAEAVKVVDEMMREDGVEPDVRCFNVLVKGFCGDGKVEEAKHWYEELVR 1027
             +L  ++ + R++EAV+++DE M+  G++PDV   N L+KGFC  G +EEAK WY E+ R
Sbjct: 238  AKLRGVISENRMSEAVELIDE-MKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIAR 296

Query: 1028 CGCVANRATYETLVPFLLEKGDFNMAFELCKAAVTVTGKLPIDAGTLKRAVEEFVAEGMT 1207
                  RATY TL+PFL+EKGDF+MA ELCK     + +  I+   L++ +E  V E   
Sbjct: 297  NELPPVRATYMTLIPFLVEKGDFDMATELCKE--VCSRRWLIEPALLQQVLEGLVKESKI 354

Query: 1208 KEVTELVVLAKKRKMKIELPL 1270
            +E TELV LAK +K +I L L
Sbjct: 355  EEATELVELAKLKKFRITLEL 375


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  308 bits (789), Expect = 2e-81
 Identities = 161/365 (44%), Positives = 234/365 (64%)
 Frame = +2

Query: 158  SIASKPSIAATTTVVHSFHDDDFTTPEGLRNVVESFKKSCENNQFRRRARTYGYTVRRLA 337
            S+ S  + A  T  + S   D +     L+ +V+ FKKS E ++FR +   Y  TVRRLA
Sbjct: 20   SLVSPSATAQATGNLESVFKDIYRE-RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLA 78

Query: 338  EAQAYPMIEEIIESQKKYKEISYEGFVVRLISLYGKARMFDHARALFDEMPSFNCRRTTN 517
             A+ +  IEEI+E QKKYK+IS EGF VRLISLYGK+ MFDHA  +FDEMP   C R+  
Sbjct: 79   SAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVL 138

Query: 518  XXXXXXXXXXNAERYDVVHDLFRQLPSQYSFQPDVASYNVVIHAFCKMGSTDSAISMLSE 697
                      +++++D +   F++LP      PDV SYN++++AFC+MGS DSA+S+L E
Sbjct: 139  SFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDE 198

Query: 698  MEELGLKPDWITFNTLIGGFYKQHGYDEAERIWALLRAQNNFVPTVGNYLLRLGRMVHDG 877
            ME++GL+PD ITFNTL+  FY+   Y + E+IW L++ +NN  P V +Y  +L  ++ + 
Sbjct: 199  MEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMK-KNNVAPNVRSYNAKLRGVISEN 257

Query: 878  RVAEAVKVVDEMMREDGVEPDVRCFNVLVKGFCGDGKVEEAKHWYEELVRCGCVANRATY 1057
            R++EAV+++DE M+  G++PDV   N L+KGFC  G +EEAK WY E+ R      RATY
Sbjct: 258  RMSEAVELIDE-MKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATY 316

Query: 1058 ETLVPFLLEKGDFNMAFELCKAAVTVTGKLPIDAGTLKRAVEEFVAEGMTKEVTELVVLA 1237
             TL+PFL+EKGDF+MA ELCK     + +  I+   L++ +E  V E   +E TEL ++ 
Sbjct: 317  MTLIPFLVEKGDFDMATELCKE--VCSRRWLIEPALLQQVLEGLVKESKIEEATELFLIF 374

Query: 1238 KKRKM 1252
            +  ++
Sbjct: 375  RSYQL 379


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score =  303 bits (777), Expect = 6e-80
 Identities = 156/340 (45%), Positives = 222/340 (65%)
 Frame = +2

Query: 251  VVESFKKSCENNQFRRRARTYGYTVRRLAEAQAYPMIEEIIESQKKYKEISYEGFVVRLI 430
            +V+ FKKS ++ +FR R   Y   V  LA+A+ +  IE+I+E QK+Y EIS E F VRL+
Sbjct: 1    MVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLM 60

Query: 431  SLYGKARMFDHARALFDEMPSFNCRRTTNXXXXXXXXXXNAERYDVVHDLFRQLPSQYSF 610
            +LYGKA MF+HA  LFDE P  NC RT             ++++D +   F++LP     
Sbjct: 61   TLYGKAGMFEHAHKLFDEXPKLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGV 120

Query: 611  QPDVASYNVVIHAFCKMGSTDSAISMLSEMEELGLKPDWITFNTLIGGFYKQHGYDEAER 790
             PDV SYN++++AFC+MGS DSA+S+L EME++GL+PD ITFNTL+  FY+   Y + E+
Sbjct: 121  VPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEK 180

Query: 791  IWALLRAQNNFVPTVGNYLLRLGRMVHDGRVAEAVKVVDEMMREDGVEPDVRCFNVLVKG 970
            IW L++ +NN  P V +Y  +L  ++ + R++EAV+++DE M+  G++PDV   N L+KG
Sbjct: 181  IWDLMK-KNNVAPNVRSYNAKLRGVISENRMSEAVELIDE-MKTSGIKPDVFTLNSLMKG 238

Query: 971  FCGDGKVEEAKHWYEELVRCGCVANRATYETLVPFLLEKGDFNMAFELCKAAVTVTGKLP 1150
            FC  G +EEAK WY E+ R      RATY TL+PFL+EKGDF+MA ELCK     + +  
Sbjct: 239  FCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKE--VCSRRWL 296

Query: 1151 IDAGTLKRAVEEFVAEGMTKEVTELVVLAKKRKMKIELPL 1270
            I+   L++ +E  V E   +E TELV LAK +K +I L L
Sbjct: 297  IEPALLQQVLEGLVKESKIEEATELVELAKLKKFRITLEL 336


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
            mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  303 bits (776), Expect = 8e-80
 Identities = 155/343 (45%), Positives = 222/343 (64%)
 Frame = +2

Query: 242  LRNVVESFKKSCENNQFRRRARTYGYTVRRLAEAQAYPMIEEIIESQKKYKEISYEGFVV 421
            L+ +++ FKKS ++ +FR R   Y   V  LA+A+    IE+I+E Q++Y EIS E F V
Sbjct: 37   LKEMIDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKLSFIEDILEHQEQYNEISTEVFAV 96

Query: 422  RLISLYGKARMFDHARALFDEMPSFNCRRTTNXXXXXXXXXXNAERYDVVHDLFRQLPSQ 601
            RL++LYG A MFDHA  LFDE+P  NC RT            N++++D +   F++LP  
Sbjct: 97   RLMTLYGTAGMFDHAHKLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGN 156

Query: 602  YSFQPDVASYNVVIHAFCKMGSTDSAISMLSEMEELGLKPDWITFNTLIGGFYKQHGYDE 781
                PDV SYN++++AFC+MGS DSA+S+L EME++GL+PD ITFNTL+  FY+   Y +
Sbjct: 157  LGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYAD 216

Query: 782  AERIWALLRAQNNFVPTVGNYLLRLGRMVHDGRVAEAVKVVDEMMREDGVEPDVRCFNVL 961
             E+IW L++ +NN  P V +Y  +L  ++ + R++EAV+++DE M+  G++PDV   N L
Sbjct: 217  GEKIWDLMK-KNNVAPNVRSYNAKLRGVISENRMSEAVELIDE-MKTSGIKPDVFTLNSL 274

Query: 962  VKGFCGDGKVEEAKHWYEELVRCGCVANRATYETLVPFLLEKGDFNMAFELCKAAVTVTG 1141
            +KGFC  G +EEAK WY E+ R      RATY TL+PFL+EKGDF MA ELCK     + 
Sbjct: 275  MKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFEMATELCKE--VCSR 332

Query: 1142 KLPIDAGTLKRAVEEFVAEGMTKEVTELVVLAKKRKMKIELPL 1270
            +  I+   L++ +E  V E   +E TELV L K +K +I L L
Sbjct: 333  RWLIEPALLQQVLEGLVKESKIEEATELVELEKLKKFRITLEL 375


>ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
            mitochondrial-like [Glycine max]
          Length = 379

 Score =  288 bits (738), Expect = 2e-75
 Identities = 152/367 (41%), Positives = 225/367 (61%), Gaps = 5/367 (1%)
 Frame = +2

Query: 191  TTVVHSFHD--DDFTTPEGLRNVVESFKKSCENNQFRRRARTYGYTVRRLAEAQAYPMIE 364
            TT+  S     +D      L+NVVE FKK+ +N++FR++   Y  TVRRLA A+ +  + 
Sbjct: 17   TTIAASIRSISEDLYKEVKLKNVVEKFKKASDNDRFRKKTGIYEDTVRRLAGARRFRWVR 76

Query: 365  EIIESQKKYKEISYEGFVVRLISLYGKARMFDHARALFDEMPSFNCRRTTNXXXXXXXXX 544
            +I+E QK+Y +IS EGF  RLISLYGK+ M  HAR +FDEMP  NC RT           
Sbjct: 77   DILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAY 136

Query: 545  XNAERYDVVHDLFRQLPSQYSFQPDVASYNVVIHAFCKMGSTDSAISMLSEMEELGLKPD 724
             ++ +YDVV +LFR LP+Q S +PD+ +YN +I AFC+ GS DSA+S+L E+EE GL PD
Sbjct: 137  LHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPD 196

Query: 725  WITFNTLIGGFYKQHGYDEAERIWALLRAQNNFVPTVGNYLLRLGRMVHDGRVAEAVKVV 904
             ITFNTL+ G Y +  ++E E++W  + + NN  P V +Y  +L  +    +  EAV++ 
Sbjct: 197  SITFNTLLDGLYSKGRFEEGEKVWEQM-SVNNVAPGVRSYCSKLVGLAEVKKAGEAVELF 255

Query: 905  DEMMREDGVEPDVRCFNVLVKGFCGDGKVEEAKHWYEELVRCGCVANRATYETLVPFLLE 1084
             E M + GV+PD+ C N ++KGF  +G ++EAK W+ E+ +     ++ TY  +VPFL E
Sbjct: 256  RE-MEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKSEYDPDKNTYSIIVPFLCE 314

Query: 1085 KGDFNMAFELCKAAVTVTGKLPIDAGTLKRAVEEFVAEGMTKEVTELVVLAKKR---KMK 1255
            KGDF  A E+CK       +  +DA  L+  V++  +EGM  E  E+V + K     + +
Sbjct: 315  KGDFKTAIEMCKE--IFNNRCRVDATLLQGVVDKLASEGMITEAKEIVEIGKTNRYCRYR 372

Query: 1256 IELPLNQ 1276
            ++LP  +
Sbjct: 373  LDLPAKE 379


Top