BLASTX nr result

ID: Glycyrrhiza24_contig00007497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007497
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637291.1| RAD23 protein [Medicago truncatula] gi|35550...   547   e-153
ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23...   542   e-151
ref|XP_003529480.1| PREDICTED: putative DNA repair protein RAD23...   520   e-145
ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycin...   519   e-145
gb|ACU20959.1| unknown [Glycine max]                                  517   e-144

>ref|XP_003637291.1| RAD23 protein [Medicago truncatula] gi|355503226|gb|AES84429.1| RAD23
            protein [Medicago truncatula]
          Length = 366

 Score =  547 bits (1410), Expect = e-153
 Identities = 285/367 (77%), Positives = 297/367 (80%)
 Frame = +3

Query: 90   MKLTVKTLKGSHFEIRVQPSDSIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 269
            MKLTVKTLKGSHFEIRV PSDSIMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDETTLA
Sbjct: 1    MKLTVKTLKGSHFEIRVHPSDSIMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 270  DNKVSEDGFLVVMLSKSKAMGSAGTSSTQPAXXXXXXXXXXXXXXXXXXXXANNIVSAXX 449
            DNKVSEDGFLVVMLSKSK +GSAGTSSTQ A                    ANN  S   
Sbjct: 61   DNKVSEDGFLVVMLSKSKVLGSAGTSSTQTASNPPITVPTPDSTSVVQTQSANNNASPAV 120

Query: 450  XXXXXXXXXXYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVNRALRAAYNNPERAVD 629
                      YGQAASNLVAGSNLEQTIQQ++DMGGGSWDRDTVNRALRAA+NNPERAVD
Sbjct: 121  LAPTNVTTDTYGQAASNLVAGSNLEQTIQQLIDMGGGSWDRDTVNRALRAAFNNPERAVD 180

Query: 630  YLYSGIXXXXXXXXXXXNYPSSQXXXXXXXXXXXXXXXXNSSPLNMFPQETISGAGAGIG 809
            YLYSGI            YPS+                 NSSPLNMFPQETISGAGAG G
Sbjct: 181  YLYSGIPEAAEVAVPAAQYPSNPTETGGVTTGVVPGVP-NSSPLNMFPQETISGAGAGAG 239

Query: 810  SLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPSLLRLIDEHHAEFLQLINEPIEG 989
            SLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNP LLRLIDEHH+EFLQLINEP++G
Sbjct: 240  SLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPGLLRLIDEHHSEFLQLINEPMDG 299

Query: 990  SDGDNFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAANYLLE 1169
            ++GDNFDQ EQDMPHA+NVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAANYLLE
Sbjct: 300  TEGDNFDQAEQDMPHAVNVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAANYLLE 359

Query: 1170 NAGDFED 1190
            NAGDFED
Sbjct: 360  NAGDFED 366


>ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 1
            [Glycine max]
          Length = 367

 Score =  542 bits (1396), Expect = e-151
 Identities = 285/366 (77%), Positives = 293/366 (80%)
 Frame = +3

Query: 90   MKLTVKTLKGSHFEIRVQPSDSIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 269
            MKLTVKTLKGSHFEIRVQPSD+IMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL+
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLS 60

Query: 270  DNKVSEDGFLVVMLSKSKAMGSAGTSSTQPAXXXXXXXXXXXXXXXXXXXXANNIVSAXX 449
            DNKVSEDGFLVVMLSK K +GSAG SSTQ A                    ANN  SA  
Sbjct: 61   DNKVSEDGFLVVMLSKGKTLGSAGISSTQFASNPPTTVSTPNSTPLVQPQSANNNASATD 120

Query: 450  XXXXXXXXXXYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVNRALRAAYNNPERAVD 629
                      YGQAASNLVAGSNLEQTIQQ+MDMGGGSWDRDTV  ALRAAYNNPERAVD
Sbjct: 121  VTTTNVTTNTYGQAASNLVAGSNLEQTIQQLMDMGGGSWDRDTVTCALRAAYNNPERAVD 180

Query: 630  YLYSGIXXXXXXXXXXXNYPSSQXXXXXXXXXXXXXXXXNSSPLNMFPQETISGAGAGIG 809
            YLYSGI           +YP SQ                NSSPLNMFPQETISGAGA IG
Sbjct: 181  YLYSGIPVAAEIAVPAASYPISQTTETGGASVGAVPGVPNSSPLNMFPQETISGAGAEIG 240

Query: 810  SLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPSLLRLIDEHHAEFLQLINEPIEG 989
            SLDFLRNNPQFQALR+MVQSNPQILQPVLQELGKQNPSLL LI EHHAEFLQLINEP+EG
Sbjct: 241  SLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPSLLTLIQEHHAEFLQLINEPVEG 300

Query: 990  SDGDNFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAANYLLE 1169
            S+GD FDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACD DEQLAANYLLE
Sbjct: 301  SEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDHDEQLAANYLLE 360

Query: 1170 NAGDFE 1187
            NAGDFE
Sbjct: 361  NAGDFE 366


>ref|XP_003529480.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 1
            [Glycine max]
          Length = 363

 Score =  520 bits (1340), Expect = e-145
 Identities = 275/371 (74%), Positives = 287/371 (77%), Gaps = 4/371 (1%)
 Frame = +3

Query: 90   MKLTVKTLKGSHFEIRVQPSDSIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 269
            MKLTVKTLKGSHFEIRVQPSD++MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 270  DNKVSEDGFLVVMLSKSKAMGSAGTSSTQPAXXXXXXXXXXXXXXXXXXXX----ANNIV 437
            +NKVSEDGFLVVMLSKSK  GSA  SS QPA                        ANN  
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPATTVSMSNSTPPSDPPVQTQAANNST 120

Query: 438  SAXXXXXXXXXXXXYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVNRALRAAYNNPE 617
            S+            YG AASNLVAGSNLEQTIQQIMDMGGG+WDRDTV+RALRAAYNNPE
Sbjct: 121  SSTDAPTTNVSADTYGLAASNLVAGSNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE 180

Query: 618  RAVDYLYSGIXXXXXXXXXXXNYPSSQXXXXXXXXXXXXXXXXNSSPLNMFPQETISGAG 797
            RA+DYLYSGI                                 NSSPLNMFPQETIS  G
Sbjct: 181  RAIDYLYSGIPEAAEVAVPVPQTAGMSSGAVPVGP--------NSSPLNMFPQETISSTG 232

Query: 798  AGIGSLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPSLLRLIDEHHAEFLQLINE 977
            AG+GSLDFLRNNPQFQALR+MVQSNPQILQPVLQELGKQNP LLRLI EHH EFLQLINE
Sbjct: 233  AGLGSLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRLIQEHHGEFLQLINE 292

Query: 978  PIEGSDGDNFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 1157
            P+EGS+GD F+QPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN
Sbjct: 293  PVEGSEGDMFEQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 352

Query: 1158 YLLENAGDFED 1190
            YLLENAGDFED
Sbjct: 353  YLLENAGDFED 363


>ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycine max]
            gi|255647960|gb|ACU24437.1| unknown [Glycine max]
          Length = 363

 Score =  519 bits (1336), Expect = e-145
 Identities = 276/371 (74%), Positives = 289/371 (77%), Gaps = 4/371 (1%)
 Frame = +3

Query: 90   MKLTVKTLKGSHFEIRVQPSDSIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 269
            MKLTVKTLKGSHFEIRVQPSD++MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 270  DNKVSEDGFLVVMLSKSKAMGSAGTSSTQPAXXXXXXXXXXXXXXXXXXXX----ANNIV 437
            +NKVSEDGFLVVMLSKSK  GSA  SS QPA                        ANN  
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPPTTVSTSNSTPPSDPPVQTQAANNST 120

Query: 438  SAXXXXXXXXXXXXYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVNRALRAAYNNPE 617
            S+            YG AASNLVAGSNLEQTIQQIMDMGGG+WDRDTV+RALRAAYNNPE
Sbjct: 121  SSTDAPTTNVSADTYGLAASNLVAGSNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE 180

Query: 618  RAVDYLYSGIXXXXXXXXXXXNYPSSQXXXXXXXXXXXXXXXXNSSPLNMFPQETISGAG 797
            RA+DYLYSGI             P  Q                NSSPLNMFPQETIS  G
Sbjct: 181  RAIDYLYSGIPEAAEVAV-----PVPQTAGISSGAVPVGP---NSSPLNMFPQETISSTG 232

Query: 798  AGIGSLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPSLLRLIDEHHAEFLQLINE 977
            AG+GSLDFLRNNPQFQALR+MVQSNPQILQPVLQELGKQNP LLRLI EHH EFLQLINE
Sbjct: 233  AGLGSLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRLIQEHHGEFLQLINE 292

Query: 978  PIEGSDGDNFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 1157
            P++GS+GD F+QPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN
Sbjct: 293  PVDGSEGDIFEQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 352

Query: 1158 YLLENAGDFED 1190
            YLLENAGDFED
Sbjct: 353  YLLENAGDFED 363


>gb|ACU20959.1| unknown [Glycine max]
          Length = 363

 Score =  517 bits (1332), Expect = e-144
 Identities = 275/371 (74%), Positives = 288/371 (77%), Gaps = 4/371 (1%)
 Frame = +3

Query: 90   MKLTVKTLKGSHFEIRVQPSDSIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 269
            MKLTVKTLKGSHFEIRVQPSD++MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 270  DNKVSEDGFLVVMLSKSKAMGSAGTSSTQPAXXXXXXXXXXXXXXXXXXXX----ANNIV 437
            +NKVSEDGFLVVMLSKSK  GSA  SS QPA                        ANN  
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPPTTVSTSNSTPPSDPPVQTQAANNST 120

Query: 438  SAXXXXXXXXXXXXYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVNRALRAAYNNPE 617
            S+            YG AASNLVAGSNLEQTIQQIMDMGGG+WDRDTV+RALRAAYNNPE
Sbjct: 121  SSTDAPTTNVSADTYGLAASNLVAGSNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE 180

Query: 618  RAVDYLYSGIXXXXXXXXXXXNYPSSQXXXXXXXXXXXXXXXXNSSPLNMFPQETISGAG 797
            RA+DYLYSGI             P  Q                NSSPLNMFPQETIS  G
Sbjct: 181  RAIDYLYSGIPEAAEVAV-----PVPQTAGISSGAVPVGP---NSSPLNMFPQETISSTG 232

Query: 798  AGIGSLDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPSLLRLIDEHHAEFLQLINE 977
            AG+GSLDFLRNNPQFQALR+MVQSNPQILQPVLQELGKQNP LLRLI EHH EFLQLINE
Sbjct: 233  AGLGSLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRLIQEHHGEFLQLINE 292

Query: 978  PIEGSDGDNFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 1157
            P++GS+GD F+QPEQDMPHAINVTP EQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN
Sbjct: 293  PVDGSEGDIFEQPEQDMPHAINVTPTEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN 352

Query: 1158 YLLENAGDFED 1190
            YLLENAGDFED
Sbjct: 353  YLLENAGDFED 363


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