BLASTX nr result

ID: Glycyrrhiza24_contig00007441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007441
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43716.1| unknown [Medicago truncatula]                          373   e-101
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   373   e-101
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop...   368   1e-99
gb|ACU23468.1| unknown [Glycine max]                                  363   3e-98
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   363   6e-98

>gb|AFK43716.1| unknown [Medicago truncatula]
          Length = 226

 Score =  373 bits (958), Expect = e-101
 Identities = 184/217 (84%), Positives = 200/217 (92%)
 Frame = +3

Query: 165 MASSVTSSFQISNFKSVFLGERSKLGVPSVPAARVGFLRKTTECKESRIGKQLVVIPSNV 344
           MASSVTSSFQ+SNFKS F+GERS++ + S PA  VGF RKTTECKESRIGKQ + +PSNV
Sbjct: 1   MASSVTSSFQLSNFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPSNV 60

Query: 345 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 524
           TIK+EGQ    KGPLGELSLTYPREVKVERQE G L+VSKAVETRRANQMHGLFRTLTDN
Sbjct: 61  TIKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHGLFRTLTDN 120

Query: 525 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 704
           +VVGVSKGFEKKL+LIGVGYRATVEGNEVVLNLGFSHPV+M IPEGLKVKV+ENT+IT+S
Sbjct: 121 IVVGVSKGFEKKLQLIGVGYRATVEGNEVVLNLGFSHPVKMTIPEGLKVKVDENTRITVS 180

Query: 705 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 815
           GYDKS+IGQFAASIRKWRPPEPYKGKGIKY DEVVRR
Sbjct: 181 GYDKSEIGQFAASIRKWRPPEPYKGKGIKYEDEVVRR 217


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  373 bits (958), Expect = e-101
 Identities = 182/217 (83%), Positives = 203/217 (93%)
 Frame = +3

Query: 165 MASSVTSSFQISNFKSVFLGERSKLGVPSVPAARVGFLRKTTECKESRIGKQLVVIPSNV 344
           MASSVTSSF+ISN KSVF+GE +KL V SVP A VGF RKT ECKESRIGKQ + +PSNV
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60

Query: 345 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 524
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 525 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 704
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 121 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 180

Query: 705 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 815
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADE+VRR
Sbjct: 181 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
           max]
          Length = 226

 Score =  368 bits (945), Expect = 1e-99
 Identities = 179/217 (82%), Positives = 201/217 (92%)
 Frame = +3

Query: 165 MASSVTSSFQISNFKSVFLGERSKLGVPSVPAARVGFLRKTTECKESRIGKQLVVIPSNV 344
           M SSVTSSF+ISN  SVF+GE +K  V +VP A VGF+RKT ECKESRIGKQ + +PSNV
Sbjct: 1   MTSSVTSSFRISNLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPSNV 60

Query: 345 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 524
           T+KLEGQDIQVKGPLGEL+L+YPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 525 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 704
           LV+GVSKGFEKKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 121 LVIGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKVKVEENTRITVS 180

Query: 705 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 815
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADEVVRR
Sbjct: 181 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVVRR 217


>gb|ACU23468.1| unknown [Glycine max]
          Length = 226

 Score =  363 bits (933), Expect = 3e-98
 Identities = 178/217 (82%), Positives = 200/217 (92%)
 Frame = +3

Query: 165 MASSVTSSFQISNFKSVFLGERSKLGVPSVPAARVGFLRKTTECKESRIGKQLVVIPSNV 344
           MASSVTSSF+ISN KSVF+GE +KL V SVP A VGF RKT ECKESRIGKQ + +PSNV
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60

Query: 345 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 524
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 525 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 704
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEE+T+IT+S
Sbjct: 121 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEEDTRITVS 180

Query: 705 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 815
           GYDK ++GQFAASI KWRPPEPY GKG+KYADE+VRR
Sbjct: 181 GYDKFEVGQFAASIMKWRPPEPYIGKGVKYADEIVRR 217


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  363 bits (931), Expect = 6e-98
 Identities = 179/217 (82%), Positives = 201/217 (92%)
 Frame = +3

Query: 165 MASSVTSSFQISNFKSVFLGERSKLGVPSVPAARVGFLRKTTECKESRIGKQLVVIPSNV 344
           MASSVTSSF+I   +SVF+GE +KL V SVP A VGF RKT ECKESRIGKQ + +PSNV
Sbjct: 1   MASSVTSSFRI---RSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 57

Query: 345 TIKLEGQDIQVKGPLGELSLTYPREVKVERQETGTLRVSKAVETRRANQMHGLFRTLTDN 524
           T+KLEGQDIQVKGPLGEL+LTYPREV VER+E+GTLRV KAVETRRANQMHGLFRTLTDN
Sbjct: 58  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 117

Query: 525 LVVGVSKGFEKKLELIGVGYRATVEGNEVVLNLGFSHPVRMPIPEGLKVKVEENTKITIS 704
           LV+GVSKGF+KKL+L+GVGYRA VEGNEVVLNLGFSHPV+M IP+GLKVKVEENT+IT+S
Sbjct: 118 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 177

Query: 705 GYDKSDIGQFAASIRKWRPPEPYKGKGIKYADEVVRR 815
           GYDKS++GQFAASIRKWRPPEPYKGKG+KYADE+VRR
Sbjct: 178 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 214


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