BLASTX nr result

ID: Glycyrrhiza24_contig00007433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007433
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containi...   122   1e-25
ref|XP_002528136.1| conserved hypothetical protein [Ricinus comm...   101   2e-19
ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containi...    90   7e-16
ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [S...    70   1e-09

>ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|222845174|gb|EEE82721.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  132 bits (333), Expect = 1e-28
 Identities = 81/205 (39%), Positives = 111/205 (54%), Gaps = 2/205 (0%)
 Frame = +3

Query: 3   INLLIPRLCDSNQXXXXXXXXXXXXXSNPPLHSLDLSPLIHSLTTQHDLTQTMSLLTHLL 182
           INLLIPRLC  N              +NPP  SL  S L HSLT+Q D+T+ MSLLT L 
Sbjct: 58  INLLIPRLCLLNHLTTAIQLITTSLLANPPPKSLSFSILTHSLTSQPDMTKPMSLLTILR 117

Query: 183 HTPQSHPYISPIXXXXXXXXXXXXXXXPNHALKILRWLQRPGSPCPPDHTVYTLLIPGLC 362
           HTPQ+H ++SP+               P  ALK+  W+ RPGSPC  +  V+ +L+ GLC
Sbjct: 118 HTPQAHSHLSPM--NTMLITSYIKKKRPKEALKVYNWMLRPGSPCKVEKIVFCVLVNGLC 175

Query: 363 RHGLLLHALTAFRDMIAGGSVHSVPSLPSPDSAAQSLYRGLLRVARVNEALELNAALSCL 542
             G +L  L   +DM+      SV  LP      + +YR LL  ARV EA+EL+ AL   
Sbjct: 176 EIGWVLEGLKVLKDMV------SVGFLPI-GGLKERVYRSLLSEARVKEAVELDKALCDC 228

Query: 543 ARD--PQGTERLLHVLDRIITQWTD 611
             D   +G ++++ +LD +I  W++
Sbjct: 229 FEDVSGEGGKKVIDLLDSLIRNWSE 253


>ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449471407|ref|XP_004153300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449474047|ref|XP_004154059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449503375|ref|XP_004161971.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 258

 Score =  122 bits (307), Expect = 1e-25
 Identities = 82/208 (39%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
 Frame = +3

Query: 3   INLLIPRLCDSNQXXXXXXXXXXXXXSNPPLHSLDLSPLIHSLTTQHDLTQTMSLLTHLL 182
           INLL+PRLC  N              +NP LHSL LS L HSL +Q D   TMSLLT L 
Sbjct: 63  INLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLK 122

Query: 183 HTPQSHPYISPIXXXXXXXXXXXXXXXPNHALKILRWLQRPGSPCPPDHTVYTLLIPGLC 362
           H P +  Y +PI                  ALK+  W+ RPGSPC P+  VY  LI GL 
Sbjct: 123 HHPNALLYSTPI--VTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 363 RHGLLLHALTAFRDMIAGGSVHSVPSLPSPDSAAQS-LYRGLLRVARVNEALELNAALSC 539
           R G+   AL   R+MI    V        PD   ++ ++R LL+ A + EA+E N AL+ 
Sbjct: 181 RKGMTFDALKVLRNMIDSNLV--------PDCDLRNWVFRSLLKEAMIPEAMEFNDALNF 232

Query: 540 LARDPQGT----ERLLHVLDRIITQWTD 611
           +    Q T     R+  +L+RIIT W D
Sbjct: 233 VG--DQNTIDHLRRVSELLNRIITNWID 258


>ref|XP_002528136.1| conserved hypothetical protein [Ricinus communis]
           gi|223532434|gb|EEF34227.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  101 bits (252), Expect = 2e-19
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
 Frame = +3

Query: 147 LTQTMSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXXXPNHALKILRWLQRPGSPCPPD 326
           +T+ +SLLT L HTPQ+H Y++PI               P  A K+ +W+ RPGSPC  +
Sbjct: 1   MTKPVSLLTILRHTPQAHDYLTPITTMLITSYVKRKR--PKEAFKVYQWMLRPGSPCRVE 58

Query: 327 HTVYTLLIPGLCRHGLLLHALTAFRDMIAGGSVHSVPSLPSPDSAAQSLYRGLLRVARVN 506
             V+  L+ G C  GL+L  L   RDM+  G V  V          + +YR LL  ARV 
Sbjct: 59  KIVFLALVNGFCEFGLVLEGLRILRDMVDVGFVPGV-------RLRRRVYRSLLMEARVR 111

Query: 507 EALELNAALSCLAR-DPQGTERLLHVLDRIITQWTD 611
           EA+EL+ AL   A  D  G  +L  +LD +I  WT+
Sbjct: 112 EAVELDKALCFYANGDVDGVSKLRKLLDPVIRNWTE 147


>ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 142

 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 52/151 (34%), Positives = 75/151 (49%)
 Frame = +3

Query: 159 MSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXXXPNHALKILRWLQRPGSPCPPDHTVY 338
           M+LLT L H   +H  + PI               P  A K+  W+ RP S C P    Y
Sbjct: 1   MALLTRLKHNQFAHYSLRPITTLLISSYFKKRR--PKEAFKVFNWMSRPDSHCTPHVAAY 58

Query: 339 TLLIPGLCRHGLLLHALTAFRDMIAGGSVHSVPSLPSPDSAAQSLYRGLLRVARVNEALE 518
           +LL+ G CR+G +L AL   R M+           P+ D   + +YR LLR AR+ EA E
Sbjct: 59  SLLVHGFCRNGFVLEALKVLRAMVGADMA------PAADLRTR-VYRSLLREARIGEAKE 111

Query: 519 LNAALSCLARDPQGTERLLHVLDRIITQWTD 611
           L+A L C+    +G  ++ ++LDR+I  W +
Sbjct: 112 LDAVLRCVGDGGEGFGKVANLLDRMIGNWVE 142


>ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [Sorghum bicolor]
           gi|241927933|gb|EES01078.1| hypothetical protein
           SORBIDRAFT_03g027950 [Sorghum bicolor]
          Length = 231

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 58/201 (28%), Positives = 85/201 (42%)
 Frame = +3

Query: 3   INLLIPRLCDSNQXXXXXXXXXXXXXSNPPLHSLDLSPLIHSLTTQHDLTQTMSLLTHLL 182
           I+ L+PRL  +                      L L  L   L +   L+   +LLT L 
Sbjct: 43  ISALLPRLVSAGHVPAAGRLLSAALLLPGSQDRLPLDSLAAHLASIPTLSPAFALLTALR 102

Query: 183 HTPQSHPYISPIXXXXXXXXXXXXXXXPNHALKILRWLQRPGSPCPPDHTVYTLLIPGLC 362
           H P + P  SP+                  A  +LRWL RP SP  PD   Y   + GLC
Sbjct: 103 HHP-ARP--SPLLLASPLLGSLLSLRRARDASSVLRWLCRPDSPRRPDAATYADAVVGLC 159

Query: 363 RHGLLLHALTAFRDMIAGGSVHSVPSLPSPDSAAQSLYRGLLRVARVNEALELNAALSCL 542
           R      AL A R+M A G       LP+     +++   +L+ AR+ EA  L  AL   
Sbjct: 160 RLEDPRAALAALREMAADG-------LPATRELREAVRDAMLQDARIEEAWALEEAL--- 209

Query: 543 ARDPQGTERLLHVLDRIITQW 605
            R P+ T +L+ ++D++++ W
Sbjct: 210 -RQPEETGKLVELIDKLLSAW 229


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