BLASTX nr result

ID: Glycyrrhiza24_contig00007417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007417
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522759.1| PREDICTED: WD and tetratricopeptide repeats ...   409   e-112
ref|XP_003602948.1| DDB1- and CUL4-associated factor [Medicago t...   401   e-109
ref|XP_003526538.1| PREDICTED: WD and tetratricopeptide repeats ...   392   e-107
emb|CBI19235.3| unnamed protein product [Vitis vinifera]              367   5e-99
ref|XP_002283919.1| PREDICTED: uncharacterized protein LOC100255...   367   5e-99

>ref|XP_003522759.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Glycine
            max]
          Length = 762

 Score =  409 bits (1051), Expect = e-112
 Identities = 207/268 (77%), Positives = 220/268 (82%)
 Frame = -2

Query: 1295 NKTNDGASRFDSRGGRILSLSDILYRSEANSDASQDGPXXXXXXXXXXXXXXXXXETSMS 1116
            +KTNDGASRFDSRGGRILSLSDILYR  +N D  QDG                  ETS+S
Sbjct: 497  SKTNDGASRFDSRGGRILSLSDILYRPGSNGDPPQDGSRLERDDSDYDEELELDFETSIS 556

Query: 1115 GDEGHDPESNILHGSLNLRIHRRGDSRENVGANGXXXXXXXXXXXXXXSYQPAAAIDMKQ 936
            GDE HD ESNILHGSLNLRIHRRGDSR+N  A+G              SYQP  A+DMKQ
Sbjct: 557  GDEEHDLESNILHGSLNLRIHRRGDSRDNARASGSCESPSSSSQNSRTSYQPEPAVDMKQ 616

Query: 935  RFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLLKMLNGDESVVNCVQC 756
            RF+GHCN+GTDIKQA+FLGQRGEYVASGSDDGRW+IWEKRTGRL+KMLNGDESVVNCVQC
Sbjct: 617  RFVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWYIWEKRTGRLIKMLNGDESVVNCVQC 676

Query: 755  HPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRNRDSIL 576
            HPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSR+ +SIL
Sbjct: 677  HPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRSHNSIL 736

Query: 575  PFELLEPFRMHEFPEGSLRLRPFECAQS 492
            PF  LEPFRM EFPEG LRLRPFECAQS
Sbjct: 737  PF--LEPFRMQEFPEGPLRLRPFECAQS 762


>ref|XP_003602948.1| DDB1- and CUL4-associated factor [Medicago truncatula]
            gi|355491996|gb|AES73199.1| DDB1- and CUL4-associated
            factor [Medicago truncatula]
          Length = 758

 Score =  401 bits (1030), Expect = e-109
 Identities = 206/270 (76%), Positives = 221/270 (81%), Gaps = 2/270 (0%)
 Frame = -2

Query: 1295 NKTNDGASRFDSRGGRILSLSDILYRSEANSDASQDGPXXXXXXXXXXXXXXXXXETSMS 1116
            +KTN+G      RGGR+LSLSDILYRSEANSD SQDG                  ETS+S
Sbjct: 495  SKTNNG------RGGRMLSLSDILYRSEANSDTSQDGQRSDRDDSDYEEEMELDFETSVS 548

Query: 1115 GDEGHDPESNILHGSLNLRIHRRGDSRENVGANGXXXXXXXXXXXXXXS--YQPAAAIDM 942
            GDE HD +SNILH SLNLRIHRRGDSRENV A+G                 YQP AAIDM
Sbjct: 549  GDEEHDSDSNILHRSLNLRIHRRGDSRENVEASGSDESPSSSSSSQNGRASYQPEAAIDM 608

Query: 941  KQRFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLLKMLNGDESVVNCV 762
            KQRFIGHCNVGTDIKQANFLGQ+GEYVASGSDDGRWFIWEKRTGRL+K+L+GDESVVNCV
Sbjct: 609  KQRFIGHCNVGTDIKQANFLGQKGEYVASGSDDGRWFIWEKRTGRLMKLLSGDESVVNCV 668

Query: 761  QCHPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRNRDS 582
            QCHPFDFVVATSGID+TIKIWTP+APV SSVAGGSAGPETGDVL AME+NQQKLSRNRDS
Sbjct: 669  QCHPFDFVVATSGIDNTIKIWTPSAPVASSVAGGSAGPETGDVLGAMENNQQKLSRNRDS 728

Query: 581  ILPFELLEPFRMHEFPEGSLRLRPFECAQS 492
            +LPFELLEPFRMHEFPEGSLRLRPFECAQ+
Sbjct: 729  MLPFELLEPFRMHEFPEGSLRLRPFECAQT 758


>ref|XP_003526538.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Glycine
            max]
          Length = 762

 Score =  392 bits (1008), Expect = e-107
 Identities = 200/268 (74%), Positives = 216/268 (80%)
 Frame = -2

Query: 1295 NKTNDGASRFDSRGGRILSLSDILYRSEANSDASQDGPXXXXXXXXXXXXXXXXXETSMS 1116
            ++TNDGASRFDSRGGRILSLSDILY  E+NSD   DG                  ETS+S
Sbjct: 497  SQTNDGASRFDSRGGRILSLSDILYCPESNSDDPHDGSRSERDDSDYDDELELDFETSIS 556

Query: 1115 GDEGHDPESNILHGSLNLRIHRRGDSRENVGANGXXXXXXXXXXXXXXSYQPAAAIDMKQ 936
            GDEGHD ESNILHG+LNLRIH RGDSR+N  A+G              SYQP  A+DMKQ
Sbjct: 557  GDEGHDLESNILHGNLNLRIHGRGDSRDNADASGSCESPSSSSQNSRTSYQPEPAVDMKQ 616

Query: 935  RFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLLKMLNGDESVVNCVQC 756
            RF+GHCN+GTDIKQA+FLGQRGEYVASGSDDGRWFIWEK TGRL+KML+GDESVVNCVQC
Sbjct: 617  RFVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKCTGRLIKMLSGDESVVNCVQC 676

Query: 755  HPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRNRDSIL 576
            HPFDFVVATSGIDSTIKIWTP APVPSSVAGGSAGPETGDVLVAMESNQQKLSR+ +SIL
Sbjct: 677  HPFDFVVATSGIDSTIKIWTPTAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRSHNSIL 736

Query: 575  PFELLEPFRMHEFPEGSLRLRPFECAQS 492
            P  LLE FR  +FPEGSLRL PFECAQS
Sbjct: 737  P--LLESFRRQDFPEGSLRLHPFECAQS 762


>emb|CBI19235.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  367 bits (941), Expect = 5e-99
 Identities = 188/269 (69%), Positives = 209/269 (77%), Gaps = 1/269 (0%)
 Frame = -2

Query: 1295 NKTNDGASRFDSRGGRILSLSDILYRSEANSDASQDGPXXXXXXXXXXXXXXXXXETSMS 1116
            NK+NDG  R ++R GR LSLS+ILYRSEANSDASQDGP                 ETS+S
Sbjct: 497  NKSNDGVPRSETRSGRFLSLSEILYRSEANSDASQDGPRSEREDSDYDEELELDFETSVS 556

Query: 1115 GDEGHDPESNILHGSLNLRIHRRGDS-RENVGANGXXXXXXXXXXXXXXSYQPAAAIDMK 939
            GDEG D ESNILHGSLNLRIHRR DS RE  G NG               YQP  AIDMK
Sbjct: 557  GDEGRDVESNILHGSLNLRIHRRCDSARETSGTNGACGSPTSSRNDKTT-YQPETAIDMK 615

Query: 938  QRFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLLKMLNGDESVVNCVQ 759
            QR++GHCN+GTDIKQA+FLG RGEYVASGSDDGRWFIW+KRTGRL+KML GDE VVNCVQ
Sbjct: 616  QRYVGHCNIGTDIKQASFLGCRGEYVASGSDDGRWFIWDKRTGRLIKMLMGDEHVVNCVQ 675

Query: 758  CHPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRNRDSI 579
            CHPFD  VATSGID+TIKIWTP+AP+PS VAGG+AGPET DVL AME+NQ+KL RNRD+I
Sbjct: 676  CHPFDCTVATSGIDNTIKIWTPSAPIPSIVAGGAAGPETADVLEAMENNQRKLCRNRDAI 735

Query: 578  LPFELLEPFRMHEFPEGSLRLRPFECAQS 492
            LPFELLE FRMH+F EG+  L PFEC+QS
Sbjct: 736  LPFELLERFRMHDFGEGT--LHPFECSQS 762


>ref|XP_002283919.1| PREDICTED: uncharacterized protein LOC100255806 [Vitis vinifera]
          Length = 523

 Score =  367 bits (941), Expect = 5e-99
 Identities = 188/269 (69%), Positives = 209/269 (77%), Gaps = 1/269 (0%)
 Frame = -2

Query: 1295 NKTNDGASRFDSRGGRILSLSDILYRSEANSDASQDGPXXXXXXXXXXXXXXXXXETSMS 1116
            NK+NDG  R ++R GR LSLS+ILYRSEANSDASQDGP                 ETS+S
Sbjct: 258  NKSNDGVPRSETRSGRFLSLSEILYRSEANSDASQDGPRSEREDSDYDEELELDFETSVS 317

Query: 1115 GDEGHDPESNILHGSLNLRIHRRGDS-RENVGANGXXXXXXXXXXXXXXSYQPAAAIDMK 939
            GDEG D ESNILHGSLNLRIHRR DS RE  G NG               YQP  AIDMK
Sbjct: 318  GDEGRDVESNILHGSLNLRIHRRCDSARETSGTNGACGSPTSSRNDKTT-YQPETAIDMK 376

Query: 938  QRFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLLKMLNGDESVVNCVQ 759
            QR++GHCN+GTDIKQA+FLG RGEYVASGSDDGRWFIW+KRTGRL+KML GDE VVNCVQ
Sbjct: 377  QRYVGHCNIGTDIKQASFLGCRGEYVASGSDDGRWFIWDKRTGRLIKMLMGDEHVVNCVQ 436

Query: 758  CHPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRNRDSI 579
            CHPFD  VATSGID+TIKIWTP+AP+PS VAGG+AGPET DVL AME+NQ+KL RNRD+I
Sbjct: 437  CHPFDCTVATSGIDNTIKIWTPSAPIPSIVAGGAAGPETADVLEAMENNQRKLCRNRDAI 496

Query: 578  LPFELLEPFRMHEFPEGSLRLRPFECAQS 492
            LPFELLE FRMH+F EG+  L PFEC+QS
Sbjct: 497  LPFELLERFRMHDFGEGT--LHPFECSQS 523


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