BLASTX nr result

ID: Glycyrrhiza24_contig00007338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007338
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602004.1| Tetratricopeptide repeat protein [Medicago t...   617   e-174
gb|AFK36694.1| unknown [Medicago truncatula]                          612   e-173
ref|XP_003552098.1| PREDICTED: trafficking protein particle comp...   596   e-168
ref|XP_003538513.1| PREDICTED: trafficking protein particle comp...   594   e-167
ref|XP_004143481.1| PREDICTED: trafficking protein particle comp...   517   e-144

>ref|XP_003602004.1| Tetratricopeptide repeat protein [Medicago truncatula]
            gi|355491052|gb|AES72255.1| Tetratricopeptide repeat
            protein [Medicago truncatula]
          Length = 359

 Score =  617 bits (1591), Expect = e-174
 Identities = 307/361 (85%), Positives = 331/361 (91%)
 Frame = +2

Query: 56   MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 235
            M+SDSPRSE+QTDPL+N  +ELCHDLHSLQDLA RGAWRSIIDKV+RARAL+LLQKPHDH
Sbjct: 1    MESDSPRSETQTDPLINPLDELCHDLHSLQDLANRGAWRSIIDKVARARALSLLQKPHDH 60

Query: 236  LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRLGSMVPFSLRWLH 415
            LTYLAFNALAFTKLRRFNEAS+ELDS EDLDSSHYRYETYPK+YPNR+GSMVPFSLRWLH
Sbjct: 61   LTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYRYETYPKVYPNRVGSMVPFSLRWLH 120

Query: 416  ALIPIKLGQRQQGIDRLYRLLDFVREKINDKKHNNLSISLGAWRRREVLVVNCIIGQHLG 595
            ALIPIKLGQRQQGIDRLY LLDFVREKI  K+ +NLS S+  WR+REV VVNCIIG HL 
Sbjct: 121  ALIPIKLGQRQQGIDRLYNLLDFVREKIRIKEDDNLSASVRVWRKREVFVVNCIIGHHLS 180

Query: 596  HKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSLL 775
            HKEFGVCLSL+K L+SR   DP LISQLGYIQLQ GDLEGAK SFLK E +GK+ GS  L
Sbjct: 181  HKEFGVCLSLIKTLISRDPEDPFLISQLGYIQLQTGDLEGAKDSFLKAEGDGKNHGS--L 238

Query: 776  SEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDS 955
            SEVE KNL NRNKAL+YMVGKDYVSAVREY+ CIERD++D+VA NNKALCLMYLRDLSDS
Sbjct: 239  SEVEFKNLANRNKALIYMVGKDYVSAVREYDVCIERDHSDIVAFNNKALCLMYLRDLSDS 298

Query: 956  IKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTR 1135
            IKVLENALERVPTVALNET+VVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFD+TCTR
Sbjct: 299  IKVLENALERVPTVALNETIVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTR 358

Query: 1136 T 1138
            T
Sbjct: 359  T 359


>gb|AFK36694.1| unknown [Medicago truncatula]
          Length = 359

 Score =  612 bits (1578), Expect = e-173
 Identities = 304/361 (84%), Positives = 330/361 (91%)
 Frame = +2

Query: 56   MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 235
            M+SDSPRSE+QTDPL+N  +ELCHDLHSLQDLA RGAWRSIIDKV+RARAL+LLQKPHDH
Sbjct: 1    MESDSPRSETQTDPLINPLDELCHDLHSLQDLANRGAWRSIIDKVARARALSLLQKPHDH 60

Query: 236  LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRLGSMVPFSLRWLH 415
            LTYLAFNALAFTKLRRFNEAS+ELDS EDLDSSHYRYETYPK++PNR+GS+VPFSLRWLH
Sbjct: 61   LTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYRYETYPKVHPNRVGSIVPFSLRWLH 120

Query: 416  ALIPIKLGQRQQGIDRLYRLLDFVREKINDKKHNNLSISLGAWRRREVLVVNCIIGQHLG 595
            ALIPIKLGQRQQGIDRLY LLDFVREKI  K+ +NLS S+  WR+REV VVNCIIG HL 
Sbjct: 121  ALIPIKLGQRQQGIDRLYNLLDFVREKIRIKEDDNLSASVRVWRKREVFVVNCIIGHHLS 180

Query: 596  HKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSLL 775
            HKEFGVCLSL+K L+SR   DP LISQLGYIQLQ GDLEGAK SFLK E +GK+ GS  L
Sbjct: 181  HKEFGVCLSLIKTLISRDPEDPFLISQLGYIQLQTGDLEGAKDSFLKAEGDGKNHGS--L 238

Query: 776  SEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDS 955
            SEVE KNL NRNKAL+YMVGKDYVSAVREY+ CIERD++D+ A NNKALCLMYLRDLSDS
Sbjct: 239  SEVEFKNLANRNKALIYMVGKDYVSAVREYDVCIERDHSDIAAFNNKALCLMYLRDLSDS 298

Query: 956  IKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTR 1135
            IKVLENALERVPTVALNET+VVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFD+TCTR
Sbjct: 299  IKVLENALERVPTVALNETIVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTR 358

Query: 1136 T 1138
            T
Sbjct: 359  T 359


>ref|XP_003552098.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Glycine max]
          Length = 360

 Score =  596 bits (1536), Expect = e-168
 Identities = 302/362 (83%), Positives = 328/362 (90%), Gaps = 1/362 (0%)
 Frame = +2

Query: 56   MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 235
            MDS+S  S+SQ  PL N  ++ CHD+ SL++LA RGAWRSIIDKVSRARAL+LL KPHDH
Sbjct: 1    MDSESSNSDSQPHPLSNPIDDACHDMSSLEELANRGAWRSIIDKVSRARALSLLHKPHDH 60

Query: 236  LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRLGSMVPFSLRWLH 415
            LTYLAFNAL+FTKLRRFNEASAELDS EDLDSSHYRYETYPKIYPNR+GSMVPFSLRWLH
Sbjct: 61   LTYLAFNALSFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRIGSMVPFSLRWLH 120

Query: 416  ALIPIKLGQRQQGIDRLYRLLDFVREKINDK-KHNNLSISLGAWRRREVLVVNCIIGQHL 592
            ALIPIKLGQRQQG+DR Y LLDFVR KI +K K +NL +SL  WR+REV VVNCIIG HL
Sbjct: 121  ALIPIKLGQRQQGMDRFYILLDFVRGKIKEKEKLSNLGVSLNLWRKREVFVVNCIIGNHL 180

Query: 593  GHKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSL 772
              KEFGVCLSLMK+LLSR   DPLL+SQLGY+QLQ+GDLEGAK SFLKVE  GKS+GS  
Sbjct: 181  SQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKVSFLKVEELGKSNGS-- 238

Query: 773  LSEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSD 952
            LSEVE +NLVNRNKALVY+VGKDYVSAVREYEECIERD+ADVVAVNNKALCLMYLRDLSD
Sbjct: 239  LSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSD 298

Query: 953  SIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCT 1132
            SIKVLE+ALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLS+WIARVAPDDFDA+CT
Sbjct: 299  SIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDASCT 358

Query: 1133 RT 1138
            RT
Sbjct: 359  RT 360


>ref|XP_003538513.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Glycine max]
          Length = 361

 Score =  594 bits (1532), Expect = e-167
 Identities = 300/362 (82%), Positives = 328/362 (90%), Gaps = 1/362 (0%)
 Frame = +2

Query: 56   MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 235
            M+S+S  S+S+T PL +  ++ CHD+ SL++LA RGAWRSIIDKVSRARAL+LL KPHDH
Sbjct: 1    MESESSISDSETHPLSDQIDDACHDMSSLEELASRGAWRSIIDKVSRARALSLLHKPHDH 60

Query: 236  LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRLGSMVPFSLRWLH 415
            LTYLAFNALAFTKLRRFNEASAELDS EDL SSHYRYETYPKIYPNR+GSMVPFSLRW+H
Sbjct: 61   LTYLAFNALAFTKLRRFNEASAELDSLEDLHSSHYRYETYPKIYPNRIGSMVPFSLRWVH 120

Query: 416  ALIPIKLGQRQQGIDRLYRLLDFVREKINDK-KHNNLSISLGAWRRREVLVVNCIIGQHL 592
            ALIPIKLGQRQQG+DR Y LLDFVR KIN+K K NNL +SL  WR+REV VVNCIIG HL
Sbjct: 121  ALIPIKLGQRQQGMDRFYILLDFVRGKINEKEKQNNLGVSLNLWRKREVFVVNCIIGNHL 180

Query: 593  GHKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSL 772
              KEFGVCLSLMK+LLSR   DPLL+SQLGY+QLQ+GDLEGAK SFLKVE  GKS+  S 
Sbjct: 181  SQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKISFLKVEELGKSNNGS- 239

Query: 773  LSEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSD 952
            LSEVE +NLVNRNKALVY+VGKDYVSAVREYEECIERD+ADVVAVNNKALCLMYLRDLSD
Sbjct: 240  LSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSD 299

Query: 953  SIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCT 1132
            SIKVLE+ALERVPTVALNETLVVNLCSMYELAYVNHSD+KRTLSSWIARVAPDDFDA+CT
Sbjct: 300  SIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDVKRTLSSWIARVAPDDFDASCT 359

Query: 1133 RT 1138
            RT
Sbjct: 360  RT 361


>ref|XP_004143481.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Cucumis sativus]
          Length = 387

 Score =  517 bits (1332), Expect = e-144
 Identities = 256/355 (72%), Positives = 301/355 (84%), Gaps = 6/355 (1%)
 Frame = +2

Query: 89   TDPL---LNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDHLTYLAFNA 259
            +DPL     S  +L HDL SLQDLA RG+WRSI+DKV+RARAL LLQKPHDHLTYL++N 
Sbjct: 34   SDPLTTQFGSLNDLAHDLFSLQDLATRGSWRSILDKVARARALTLLQKPHDHLTYLSYNV 93

Query: 260  LAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRLGSMVPFSLRWLHALIPIKLG 439
            LA  KLRRF EA AELDS EDL+SS YRYE+YP +YPNR GSMVPFSLRWL ALIPIK+G
Sbjct: 94   LALVKLRRFAEALAELDSLEDLNSSQYRYESYPSVYPNRTGSMVPFSLRWLQALIPIKMG 153

Query: 440  QRQQGIDRLYRLLDFVREKINDKKHNNLSISLGAWRRREVLVVNCIIGQHLGHKEFGVCL 619
            +RQ G+DR Y LLDFV+ K+ DK+   L +S+  W++R V V+NCIIG HL +KEFGVCL
Sbjct: 154  ERQHGLDRFYELLDFVQSKLKDKEEKKLDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCL 213

Query: 620  SLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVE---NEGKSDGSSLLSEVEV 790
            +L+ +LLS    DP LIS+LGYIQ+  GD+EGAK SF ++E    EGKS GS  LSEVE+
Sbjct: 214  TLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFNRIEELVKEGKSSGS--LSEVEM 271

Query: 791  KNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDSIKVLE 970
            KNLVNRNKALV++VGKDY+SAVREYEECIERDN+D+VA+NNKALCLMYLRDL+DSIKVLE
Sbjct: 272  KNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAINNKALCLMYLRDLADSIKVLE 331

Query: 971  NALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTR 1135
            NALERVPTVALNET++VNLCSMYELAYVNHS+IKRTL++WIARVAPDDFD++ TR
Sbjct: 332  NALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSSTR 386


Top