BLASTX nr result

ID: Glycyrrhiza24_contig00007303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007303
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603469.1| Transcription elongation factor A protein [M...   363   3e-98
ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808...   357   2e-96
ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791...   337   3e-90
emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]   178   2e-42
ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267...   176   6e-42

>ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
            gi|355492517|gb|AES73720.1| Transcription elongation
            factor A protein [Medicago truncatula]
          Length = 1132

 Score =  363 bits (933), Expect = 3e-98
 Identities = 192/279 (68%), Positives = 209/279 (74%), Gaps = 7/279 (2%)
 Frame = -1

Query: 997  VNSIDNGLIGIIVWRKTTNLTSSISPTTQSQHKHSSKRQYLSRRQQDTNV----TQKAVP 830
            VNSIDNGLIGIIVWRKT N+T+SISPT QS HKHSSKRQ LSRRQQDTNV    T  AVP
Sbjct: 862  VNSIDNGLIGIIVWRKT-NITTSISPTAQSHHKHSSKRQILSRRQQDTNVNANSTHNAVP 920

Query: 829  PMGFKTAENXXXXXXXXXXXXXXXXXXXPAVARAEDDLPEFNFSGGSNPS-HLVQKPMGP 653
             MGFKT  +                      AR EDDLPE+NFSG SNPS HLVQK MGP
Sbjct: 921  SMGFKTTVSEPPSGDDDDVPPGFGPP-----ARVEDDLPEYNFSGSSNPSSHLVQKHMGP 975

Query: 652  GMVPFHSVGQAAPPPRPVEQMRELVHKYGQSKTTVSSVNWHDKFGGTIQPWNDDDDDIPE 473
             MV  HSV Q   P RP +QMRELVHKYGQ+KTTV+SVNW DKFGG+IQPWNDDDDDIPE
Sbjct: 976  SMVTSHSVVQT--PSRPAQQMRELVHKYGQNKTTVTSVNWQDKFGGSIQPWNDDDDDIPE 1033

Query: 472  WQPQ-TSQIQLPSQQTMHNFPLRPHIVNQSFADLPQQSIMTTQHLQPPMNATHLQRNFGP 296
            WQPQ  +Q Q P QQTM+NF LRPH+VNQS+A LPQQSIM TQ+LQPPMN TH+Q+NFGP
Sbjct: 1034 WQPQINNQNQFPPQQTMNNFHLRPHVVNQSYAGLPQQSIMPTQYLQPPMNVTHVQQNFGP 1093

Query: 295  MGVHSTQGNNIQTTGVPPYGAPAQGTS-WSQHVSRSRGL 182
              V S QGNN Q +  PPYG P QGT+ WSQHVSRSR L
Sbjct: 1094 QWVPSIQGNNTQPSAAPPYGTPTQGTTPWSQHVSRSRRL 1132


>ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
          Length = 1143

 Score =  357 bits (916), Expect = 2e-96
 Identities = 191/276 (69%), Positives = 197/276 (71%), Gaps = 5/276 (1%)
 Frame = -1

Query: 997  VNSIDNGLIGIIVWRKTTNLTSSISPTTQSQHKHSSKRQYLSRRQQDTNV----TQKAVP 830
            VNSIDNGLIGIIVWRKT NLTSSISPTT S HKHSSKRQY SRRQQD NV    T KAVP
Sbjct: 882  VNSIDNGLIGIIVWRKT-NLTSSISPTTASHHKHSSKRQYFSRRQQDINVNANSTHKAVP 940

Query: 829  PMGFKTAENXXXXXXXXXXXXXXXXXXXPAVARAEDDLPEFNFSGGSNPSHLVQKPMGP- 653
             MG KT EN                      AR EDDLPEFNFSG SNPSHL QK MGP 
Sbjct: 941  SMGVKTTENDDDDVPPGFGPP---------AARVEDDLPEFNFSGSSNPSHLGQKSMGPP 991

Query: 652  GMVPFHSVGQAAPPPRPVEQMRELVHKYGQSKTTVSSVNWHDKFGGTIQPWNDDDDDIPE 473
             MVP HS   A  PPRP EQMRELVHKYGQ+K  V SVNW DKFGGTIQPWNDDDDDIPE
Sbjct: 992  NMVPLHSANPA--PPRPAEQMRELVHKYGQNKPNVPSVNWQDKFGGTIQPWNDDDDDIPE 1049

Query: 472  WQPQTSQIQLPSQQTMHNFPLRPHIVNQSFADLPQQSIMTTQHLQPPMNATHLQRNFGPM 293
            WQPQ SQ Q P QQTMHNF LRPHI+NQSF    QQ IMT Q+LQPPMN TH QRNF P 
Sbjct: 1050 WQPQNSQNQFPPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVTHGQRNFDPQ 1109

Query: 292  GVHSTQGNNIQTTGVPPYGAPAQGTSWSQHVSRSRG 185
             V S QG+N+Q  G PPY   AQGT+W Q  SRSRG
Sbjct: 1110 WVPSPQGSNLQPGGGPPY---AQGTTWPQDASRSRG 1142


>ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
          Length = 1090

 Score =  337 bits (863), Expect = 3e-90
 Identities = 182/276 (65%), Positives = 194/276 (70%), Gaps = 5/276 (1%)
 Frame = -1

Query: 997  VNSIDNGLIGIIVWRKTTNLTSSISPTTQSQHKHSSKRQYLSRRQQDTNV----TQKAVP 830
            VNSIDNGLIGIIVWRKT NLTSSISPTT+S HKHSSKRQY SRRQQD N+    T KAVP
Sbjct: 831  VNSIDNGLIGIIVWRKT-NLTSSISPTTESHHKHSSKRQYFSRRQQDINMNANSTLKAVP 889

Query: 829  PMGFKTAENXXXXXXXXXXXXXXXXXXXPAVARAEDDLPEFNFSGGSNPSHLVQKPMGPG 650
             MG K  EN                     VA+ EDDL EF+F   SNPSHL QKPMG  
Sbjct: 890  SMGVKMTENDDDDVPPGFGPP---------VAQVEDDLSEFSFC--SNPSHLGQKPMGSS 938

Query: 649  -MVPFHSVGQAAPPPRPVEQMRELVHKYGQSKTTVSSVNWHDKFGGTIQPWNDDDDDIPE 473
             +VP H V  A  PP P EQMRELVHKYGQ+K  V S+NW DKFGGTIQPWNDDDDDIPE
Sbjct: 939  NVVPLHPVNPA--PPCPAEQMRELVHKYGQNKPNVPSINWQDKFGGTIQPWNDDDDDIPE 996

Query: 472  WQPQTSQIQLPSQQTMHNFPLRPHIVNQSFADLPQQSIMTTQHLQPPMNATHLQRNFGPM 293
            WQPQ SQ Q P QQTMHNF LRPHI+NQSF    QQ IMT Q+LQPPMN TH QRNF P 
Sbjct: 997  WQPQNSQNQFPPQQTMHNFHLRPHILNQSFPGSQQQPIMTPQYLQPPMNVTHGQRNFDPQ 1056

Query: 292  GVHSTQGNNIQTTGVPPYGAPAQGTSWSQHVSRSRG 185
            GV S QG+N+Q  G PPY   AQGT+W QH S S G
Sbjct: 1057 GVPSPQGSNLQPRGGPPY---AQGTTWPQHASSSTG 1089


>emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
          Length = 1059

 Score =  178 bits (451), Expect = 2e-42
 Identities = 129/320 (40%), Positives = 157/320 (49%), Gaps = 49/320 (15%)
 Frame = -1

Query: 997  VNSIDNGLIGIIVWRKTTNLTSSISPTTQSQHKHSSKRQYLSRRQQ-------DTNVTQK 839
            +NS DNGLIG++VWRK   LTS+ISP + S HKH +K+Q+ S R+        ++N T K
Sbjct: 752  LNSTDNGLIGVVVWRKA-QLTSTISPNSSSLHKHGTKKQHFSTRRHHEKDANMNSNFTSK 810

Query: 838  AVPPMGFKTAENXXXXXXXXXXXXXXXXXXXPAVARAEDDLPEFNFSGGSN----PSHLV 671
               P+G  +A N                    A +R EDDLPEF FSGGSN    P    
Sbjct: 811  PSHPLG--SAPNIPEPSTDDDDDIPPGFGP--AASRDEDDLPEFQFSGGSNSSTAPFSAR 866

Query: 670  QKPMGPGMVPFHSVGQAAPPPRPVEQMRELVHKYGQSKTTVSSVNWHDK---FGGTIQPW 500
              P GPG+ PF+       PPRPVEQMR+L+ KYGQS    SS NW DK    G   QPW
Sbjct: 867  TTPGGPGVAPFNQPPHN--PPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVTQPW 924

Query: 499  -NDDDDDIPEWQPQTSQIQL-PSQQT--MHNFPLRP----HIVNQSFADLPQQSI----- 359
             +DDDDDIPEWQPQ  Q QL P Q T  ++ F  +P    H+     A  PQQ +     
Sbjct: 925  ADDDDDDIPEWQPQAPQQQLHPPQPTPPVYGFQAQPVLPXHMQQHLGAAQPQQPLGPLPT 984

Query: 358  ---MTTQHLQPPMNATHLQRN-------------------FGPMGVHSTQGNNIQTTGVP 245
               MT Q LQ  +N     +N                    GP G+ S QGN       P
Sbjct: 985  PLSMTLQSLQSSVNLVQAPQNPPTPSWQQQQQQGSWWVPPSGPQGLPSVQGN------AP 1038

Query: 244  PYGAPAQGTSWSQHVSRSRG 185
              G    G +W Q V RSRG
Sbjct: 1039 YPGTGQTGINWRQDVPRSRG 1058


>ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
          Length = 1146

 Score =  176 bits (447), Expect = 6e-42
 Identities = 130/323 (40%), Positives = 158/323 (48%), Gaps = 52/323 (16%)
 Frame = -1

Query: 997  VNSIDNGLIGIIVWRKTTNLTSSISPTTQSQHKHSSKRQYLSRRQQ-------DTNVTQK 839
            +NS DNGLIG++VWRK   LTS+ISP + S HKH +K+Q+ S R+        ++N T K
Sbjct: 839  LNSTDNGLIGVVVWRKA-QLTSTISPNSSSLHKHGTKKQHFSTRRHHEKDANMNSNFTSK 897

Query: 838  AVPPMGFKTAENXXXXXXXXXXXXXXXXXXXPAVARAEDDLPEFNFSGGSN----PSHLV 671
               P+G  +A N                    A +R EDDLPEF FSGGSN    P    
Sbjct: 898  PSHPLG--SAPNIPEPSTDDDDDIPPGFGP--AASRDEDDLPEFQFSGGSNSSTAPFSAR 953

Query: 670  QKPMGPGMVPFHSVGQAAPP---PRPVEQMRELVHKYGQSKTTVSSVNWHDK---FGGTI 509
              P GPG+ PF+      PP   PRPVEQMR+L+ KYGQS    SS NW DK    G   
Sbjct: 954  TTPGGPGVAPFNQ-----PPHNSPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVT 1008

Query: 508  QPW-NDDDDDIPEWQPQTSQIQL-PSQQT--MHNFPLRP----HIVNQSFADLPQQSI-- 359
            QPW +DDDDDIPEWQPQ  Q QL P Q T  ++ F  +P    H+     A  PQQ +  
Sbjct: 1009 QPWADDDDDDIPEWQPQAPQQQLQPPQPTPPVYGFQAQPVLPTHMQQHLGAAQPQQPLGP 1068

Query: 358  ------MTTQHLQPPMNATHLQRN-------------------FGPMGVHSTQGNNIQTT 254
                  MT Q LQ  +N     +N                    GP G+ S QGN     
Sbjct: 1069 LPTPLSMTLQSLQSSVNLVQAPQNPPTPSWQQQQQQGSWWVPPSGPQGLPSVQGN----- 1123

Query: 253  GVPPYGAPAQGTSWSQHVSRSRG 185
              P  G    G +W Q V RSRG
Sbjct: 1124 -APYPGTGQTGINWRQDVPRSRG 1145


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