BLASTX nr result

ID: Glycyrrhiza24_contig00007293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007293
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40838.1| unknown [Medicago truncatula]                          251   3e-64
ref|XP_003548304.1| PREDICTED: eukaryotic translation initiation...   245   1e-62
ref|XP_003534091.1| PREDICTED: eukaryotic translation initiation...   243   7e-62
gb|AFK36350.1| unknown [Lotus japonicus]                              235   2e-59
ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...   199   1e-48

>gb|AFK40838.1| unknown [Medicago truncatula]
          Length = 230

 Score =  251 bits (640), Expect = 3e-64
 Identities = 140/228 (61%), Positives = 150/228 (65%), Gaps = 3/228 (1%)
 Frame = -2

Query: 1042 DDWEDEQIAPIDLKLKEPPKINWXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTTEKAPK 863
            DDWE+EQ+APIDLKL EPPK+ W                            VKTTEKAPK
Sbjct: 3    DDWEEEQLAPIDLKLHEPPKLKWEDEDVDEDDVKDSWEEEDEPAPAPAAPVVKTTEKAPK 62

Query: 862  KSSEKATXXXXXXXXXXXXXP--LDPVAEKLRQQRLVEEADYKSTKELFGGGNEEKNLDT 689
            K SEKAT                LDP+AEKLRQQRLVEEADYK+TKELFGGGN+EKNLDT
Sbjct: 63   KPSEKATEKKGKKVEQEKEKEEPLDPLAEKLRQQRLVEEADYKATKELFGGGNDEKNLDT 122

Query: 688  FIPKSESDFMEYAELISHRLRPFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSXXXXX 509
            FIPKSE+DF+EYAELISHRLR FEKSYHYMGLLK VMR+SMTSLKGADAKDIASS     
Sbjct: 123  FIPKSETDFLEYAELISHRLRAFEKSYHYMGLLKNVMRISMTSLKGADAKDIASSVTAIA 182

Query: 508  XXXXXXXXXXXXXXXXXXXXXKQLHVDKPDEDFV-AEPYDALDDYDFM 368
                                 KQL VDKPDEDFV A+ YDALDDYDFM
Sbjct: 183  NEKIKAEKEANAGKKKTGGKKKQLTVDKPDEDFVAADRYDALDDYDFM 230


>ref|XP_003548304.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J-like
            [Glycine max]
          Length = 229

 Score =  245 bits (626), Expect = 1e-62
 Identities = 141/229 (61%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
 Frame = -2

Query: 1045 MDDWEDEQIAPIDLKLKEPPKINWXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTTEKAP 866
            MDDWEDE IAPIDL LK+P K NW                           AVKTTEKAP
Sbjct: 1    MDDWEDEHIAPIDLTLKDPVKSNWDDEDVDENDVKESWEDEDEPAPAPAAPAVKTTEKAP 60

Query: 865  KKSSEKATXXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKSTKELFGGGNE--EKNLD 692
            KKSS+KAT             PLDPVAEKLRQQRL+EEADYK+TKELF GG E  EKNLD
Sbjct: 61   KKSSDKATEKKGKTVEPIKEEPLDPVAEKLRQQRLIEEADYKATKELFSGGKEKDEKNLD 120

Query: 691  TFIPKSESDFMEYAELISHRLRPFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSXXXX 512
            TFIPKSESDF+EYAELISH+LR FEKSYHY+GLLKAVMRLS  SLKGADAKDIASS    
Sbjct: 121  TFIPKSESDFLEYAELISHKLRAFEKSYHYIGLLKAVMRLSTISLKGADAKDIASSVTAI 180

Query: 511  XXXXXXXXXXXXXXXXXXXXXXKQLHVDKPDEDFV-AEPYDALDDYDFM 368
                                  KQL+VDKPDEDFV A+ YDALDDYDFM
Sbjct: 181  ANEKIKAEKEANAGKKKIGGKKKQLNVDKPDEDFVPADRYDALDDYDFM 229


>ref|XP_003534091.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J-like
            [Glycine max]
          Length = 229

 Score =  243 bits (620), Expect = 7e-62
 Identities = 139/229 (60%), Positives = 149/229 (65%), Gaps = 3/229 (1%)
 Frame = -2

Query: 1045 MDDWEDEQIAPIDLKLKEPPKINWXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTTEKAP 866
            MDDWEDE IAPIDL LK+P K NW                           AVKTT KAP
Sbjct: 1    MDDWEDEHIAPIDLTLKDPVKTNWDDEDVDENDVKESWEDEDEPAPAPAAPAVKTTVKAP 60

Query: 865  KKSSEKATXXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKSTKELFGGGNE--EKNLD 692
            KKSS+K               PLDPVAEKLRQQRL+EEADYK+TKELF GGNE  EKNLD
Sbjct: 61   KKSSDKDNDKKGKTVEPIKEEPLDPVAEKLRQQRLIEEADYKATKELFSGGNEKDEKNLD 120

Query: 691  TFIPKSESDFMEYAELISHRLRPFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSXXXX 512
            TFIPKSESDF+EYAELISH+LR FEKSYHY+GLLKAVMRLS TSLKGADAKDIASS    
Sbjct: 121  TFIPKSESDFLEYAELISHKLRAFEKSYHYIGLLKAVMRLSTTSLKGADAKDIASSVTAI 180

Query: 511  XXXXXXXXXXXXXXXXXXXXXXKQLHVDKPDEDFV-AEPYDALDDYDFM 368
                                  KQL+VDKPDEDF+ A+ YDALDDYDFM
Sbjct: 181  ANEKIKAEKEANAGKKKIGGKKKQLNVDKPDEDFIPADRYDALDDYDFM 229


>gb|AFK36350.1| unknown [Lotus japonicus]
          Length = 225

 Score =  235 bits (599), Expect = 2e-59
 Identities = 131/226 (57%), Positives = 145/226 (64%)
 Frame = -2

Query: 1045 MDDWEDEQIAPIDLKLKEPPKINWXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKTTEKAP 866
            MDDWE+EQ  P+D+K K+ P   W                           AVK  EKAP
Sbjct: 1    MDDWEEEQFTPLDVK-KDQPISKWDDEDVDENDVKDSWEDFDEPAPAPVAPAVKDAEKAP 59

Query: 865  KKSSEKATXXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKSTKELFGGGNEEKNLDTF 686
            +K SEKA              PLDP+AEKLRQQRLVEEADYKSTKELFGGG +EKN+DTF
Sbjct: 60   QKPSEKAAEKKGKKVEPVKEEPLDPLAEKLRQQRLVEEADYKSTKELFGGGPDEKNIDTF 119

Query: 685  IPKSESDFMEYAELISHRLRPFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSXXXXXX 506
            IPKSESDF+EYAELISHRLR FEKSYHYMGLLKAVMRLSMTSLKGADAKDIASS      
Sbjct: 120  IPKSESDFLEYAELISHRLRSFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSITAIAN 179

Query: 505  XXXXXXXXXXXXXXXXXXXXKQLHVDKPDEDFVAEPYDALDDYDFM 368
                                KQL+VDKPD+D V++ YDA+DDYDFM
Sbjct: 180  EKIKAEKEANAGKKKTGGKKKQLNVDKPDDDIVSDRYDAMDDYDFM 225


>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223541235|gb|EEF42788.1| Eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 222

 Score =  199 bits (505), Expect = 1e-48
 Identities = 120/228 (52%), Positives = 134/228 (58%), Gaps = 2/228 (0%)
 Frame = -2

Query: 1045 MDDWEDEQIAPIDLKLKEPPKINWXXXXXXXXXXXXXXXXXXXXXXXXXXXAV--KTTEK 872
            M+DWEDEQI P  L LKE PK  W                               K T+K
Sbjct: 1    MEDWEDEQIPP--LILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEPVAKPPPEKATKK 58

Query: 871  APKKSSEKATXXXXXXXXXXXXXPLDPVAEKLRQQRLVEEADYKSTKELFGGGNEEKNLD 692
               KS EK               PLDPVAEKLRQQRLVEEADY+ST ELFG   +EK LD
Sbjct: 59   PVTKSIEKK---GKTVVAKEESQPLDPVAEKLRQQRLVEEADYRSTTELFGKRGDEKTLD 115

Query: 691  TFIPKSESDFMEYAELISHRLRPFEKSYHYMGLLKAVMRLSMTSLKGADAKDIASSXXXX 512
             FIPKSESDF+EYAEL+SH+LRP+EKS+HY+GLLKAVMRLSMT++K ADAKD+ASS    
Sbjct: 116  NFIPKSESDFLEYAELVSHKLRPYEKSFHYIGLLKAVMRLSMTAMKAADAKDVASS-VTA 174

Query: 511  XXXXXXXXXXXXXXXXXXXXXXKQLHVDKPDEDFVAEPYDALDDYDFM 368
                                  KQLHVDKPDED V + YDALDDYDFM
Sbjct: 175  IANEKLKAEKEANAGKKKGGKKKQLHVDKPDEDLVVDSYDALDDYDFM 222


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