BLASTX nr result

ID: Glycyrrhiza24_contig00007281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007281
         (2154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551218.1| PREDICTED: uncharacterized protein LOC100819...   337   8e-90
ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813...   292   2e-76
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica...   291   5e-76
ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|2...   279   2e-72
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...   266   2e-68

>ref|XP_003551218.1| PREDICTED: uncharacterized protein LOC100819953 [Glycine max]
          Length = 457

 Score =  337 bits (864), Expect = 8e-90
 Identities = 186/365 (50%), Positives = 204/365 (55%), Gaps = 13/365 (3%)
 Frame = +3

Query: 546  DWRCPNQSCGNLNFARRTECNKCG--TPSPTGAXXXXXXXXXXXXXXXXXXXXXXXXXXX 719
            DWRCPNQSCGNLNFA+R ECNKCG  +P+P  +                           
Sbjct: 94   DWRCPNQSCGNLNFAKRVECNKCGAPSPNPNSSNDRGGGYNRGGGGGGGYGNNRGGRGND 153

Query: 720  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGANQGREEGGYGQLPPPTAQXXXXXX 899
                                             +  NQGRE+GGYGQ+P PTAQ      
Sbjct: 154  YNSGGGRSGSYDGGRGNDYNSGRSGSSDGRGGSYRGNQGREDGGYGQVPAPTAQSYGGGA 213

Query: 900  XXXXXXXXXXXX--NANYGTDAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSG-R 1070
                          NA+YGT+AV                                RSG R
Sbjct: 214  GGNYPPTYSSYGGGNASYGTEAVPPPASYTGGPNSYPPSYGGNVGGYGGDNQGDGRSGGR 273

Query: 1071 AGPPAGYD------NRSGFGGAAAESPVAVKQCDDNCGDTCDNSRIYISNLPPDVTIEEL 1232
            +GPP GYD      NR GFGG++AE P AV+QCD+NC DTCDNSRIYISNLPPDVTIEEL
Sbjct: 274  SGPPTGYDSTYGAGNRGGFGGSSAEPPAAVRQCDENCDDTCDNSRIYISNLPPDVTIEEL 333

Query: 1233 RDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGNNKGDACLAYEDPSAAHSAGGFFNN 1412
            R+LFGGIGQVGRIKQKRGYKDQWPWNIKIYTD+NGNNKGDACLAYEDPSAAHSAGGF+NN
Sbjct: 334  RELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDNGNNKGDACLAYEDPSAAHSAGGFYNN 393

Query: 1413 YELRGYKISVTMAEKSAPRAPA--XXXXXXXXXXXXXXXXXXXXXXXVSGPDRRDHYSGN 1586
            Y+LRGYKISV MAEKSAPRAP                           SGPDRRDHY GN
Sbjct: 394  YDLRGYKISVAMAEKSAPRAPPAYNQGGNRGGYGGDRRRDNYRDGGGGSGPDRRDHY-GN 452

Query: 1587 RSRPY 1601
            RSRPY
Sbjct: 453  RSRPY 457


>ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max]
          Length = 404

 Score =  292 bits (748), Expect = 2e-76
 Identities = 149/268 (55%), Positives = 165/268 (61%), Gaps = 7/268 (2%)
 Frame = +3

Query: 819  FGANQGREEGGYGQLPPPTAQXXXXXXXXXXXXXXXXXXNANYGTDAVXXXXXXXXXXXX 998
            F  +QG ++GGYGQ+PPP AQ                  N+NY TD V            
Sbjct: 137  FSGSQGFDDGGYGQVPPPAAQSYGGAGGNYPPAYGSYGGNSNYETDVVPPPASYTGGPAS 196

Query: 999  XXXXXXXXXXXXXXXXXXXARSGRAGPPAGYDN------RSGFGGAAAESPVAVKQCDDN 1160
                                  GR+GPP G D+      + GFGGA AE P  VKQCD+N
Sbjct: 197  GPPSYGSNAVTSGNNVADARYGGRSGPPVGNDSGYGAGSQGGFGGAPAEPPAKVKQCDEN 256

Query: 1161 CGDTCDNSRIYISNLPPDVTIEELRDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGN 1340
            CGD+CDNSRIYISNLPPDVTIEELR+LFGGIGQVGRIKQKRGYKDQWPWNIK+YTDE GN
Sbjct: 257  CGDSCDNSRIYISNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKLYTDEKGN 316

Query: 1341 NKGDACLAYEDPSAAHSAGGFFNNYELRGYKISVTMAEKSAPRA-PAXXXXXXXXXXXXX 1517
            NKGD CL YEDPSAAHSAG F+NNY+LRGYKI V MAEKSAP+A PA             
Sbjct: 317  NKGDGCLVYEDPSAAHSAGSFYNNYDLRGYKIGVAMAEKSAPKAPPAYNHGGNRSGYGGD 376

Query: 1518 XXXXXXXXXXVSGPDRRDHYSGNRSRPY 1601
                       SGPDRRD+Y GNRSRPY
Sbjct: 377  RRRDNYRDGGSSGPDRRDNYGGNRSRPY 404



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +3

Query: 546 DWRCPNQSCGNLNFARRTECNKCGTPSPTGA 638
           DWRCPN SCGNLNFARR ECNKCG PSP+G+
Sbjct: 52  DWRCPNPSCGNLNFARRAECNKCGAPSPSGS 82


>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
            gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
            protein [Medicago truncatula]
          Length = 473

 Score =  291 bits (745), Expect = 5e-76
 Identities = 161/266 (60%), Positives = 172/266 (64%), Gaps = 5/266 (1%)
 Frame = +3

Query: 819  FGANQGREEGGYGQLPPPTAQXXXXXXXXXXXXXXXXXXNANYGTDAVXXXXXXXXXXXX 998
            +G NQGRE+GGYGQ PP  A                   NANYGTDAV            
Sbjct: 218  YGGNQGREDGGYGQAPPVAAAQSYGGAGGNYPPTYGG--NANYGTDAVPPPTSYTGGPNS 275

Query: 999  XXXXXXXXXXXXXXXXXXXARSG-RAGPPAGYD--NRSGFGGAAAE-SPVA-VKQCDDNC 1163
                               ARSG RA P AGYD  NR GFGGA AE +P A VKQCD+NC
Sbjct: 276  YPPSYGGNTGGYGGGD---ARSGGRAVPQAGYDSGNRGGFGGAPAEPAPAAPVKQCDENC 332

Query: 1164 GDTCDNSRIYISNLPPDVTIEELRDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGNN 1343
            GDTCDNSRIYISNLPPDVT++EL+ LFGGIGQVGRIKQKRGYKDQWP+NIKIYTDENG N
Sbjct: 333  GDTCDNSRIYISNLPPDVTVDELQQLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDENGKN 392

Query: 1344 KGDACLAYEDPSAAHSAGGFFNNYELRGYKISVTMAEKSAPRAPAXXXXXXXXXXXXXXX 1523
            KGDACLAYEDPSAAHSAGGF+N+Y+LRGYKI V MAEKSAPRAP                
Sbjct: 393  KGDACLAYEDPSAAHSAGGFYNDYDLRGYKIGVAMAEKSAPRAPPANNHGGNRGGYGGDR 452

Query: 1524 XXXXXXXXVSGPDRRDHYSGNRSRPY 1601
                     SGPDRRDHY GNRSRPY
Sbjct: 453  RRDN-----SGPDRRDHYGGNRSRPY 473



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +3

Query: 546 DWRCPNQSCGNLNFARRTECNKCGTPSPT 632
           DWRCPN+SCGN NFARR+ECNKCGTP PT
Sbjct: 128 DWRCPNESCGNNNFARRSECNKCGTPCPT 156


>ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|222845755|gb|EEE83302.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  279 bits (714), Expect = 2e-72
 Identities = 148/271 (54%), Positives = 162/271 (59%), Gaps = 13/271 (4%)
 Frame = +3

Query: 828  NQGREEGGYGQLPPPTAQXXXXXXXXXXXXXXXXXXNANYGTDAVXXXXXXXXXXXXXXX 1007
            NQGR++ GY Q PPP+                    NANYG +AV               
Sbjct: 130  NQGRDDSGYNQAPPPSLPSYGGGGGNYPPAPNSYGGNANYGMEAVPPPTSYTGGPTSYPP 189

Query: 1008 XXXXXXXXXXXXXXXXARSG-RAGPPAGYDNR-----------SGFGGAAAESPVAVKQC 1151
                             RSG R G P GY+             SG+G A A++P  +KQC
Sbjct: 190  SYGGPASGYGGDATGEVRSGGRGGQPGGYEGGRGGGGSRNQGGSGYGAAPADAPAKIKQC 249

Query: 1152 DDNCGDTCDNSRIYISNLPPDVTIEELRDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDE 1331
            DDNCGDTCDN+RIYISNLPPDVTIEELR+LFGGIGQVGRIKQKRGYKDQWPWNIKIYTDE
Sbjct: 250  DDNCGDTCDNARIYISNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDE 309

Query: 1332 NGNNKGDACLAYEDPSAAHSAGGFFNNYELRGYKISVTMAEKSAPRAPA-XXXXXXXXXX 1508
            NGNNKGDACLAYEDPSAAHSAGGF+NNY+ RGYKI+V MAEKSAPR PA           
Sbjct: 310  NGNNKGDACLAYEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQPAHDHGGGRGGYG 369

Query: 1509 XXXXXXXXXXXXXVSGPDRRDHYSGNRSRPY 1601
                          SGPDR  H  GNRSRPY
Sbjct: 370  GGGRRRDNYRDGGNSGPDRHQH-GGNRSRPY 399


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score =  266 bits (680), Expect = 2e-68
 Identities = 147/285 (51%), Positives = 164/285 (57%), Gaps = 24/285 (8%)
 Frame = +3

Query: 819  FGANQGRE---EGGYGQLPPPTAQXXXXXXXXXXXXXXXXXXNANYGTDAVXXXXXXXXX 989
            +G NQ R    +GG+GQ+PP   Q                  N NYG +AV         
Sbjct: 180  YGGNQARGGGGDGGFGQVPPAAPQSYGGGSAGYYPPPNSFGGNTNYGGEAVPPPTSYTGG 239

Query: 990  XXXXXXXXXXXXXXXXXXXXXXARSGRAGPPA-GYD-----------------NRSGFGG 1115
                                     GRAGPPA GYD                    G GG
Sbjct: 240  PTSYPPSYGGPASGYDGLGDTRG-GGRAGPPAGGYDGGFGGPRQQGGGYAGGGGGGGGGG 298

Query: 1116 AAAESPVAVKQCDDNCGDTCDNSRIYISNLPPDVTIEELRDLFGGIGQVGRIKQKRGYKD 1295
            +  E+PV VKQCD+NCGD+CDNSRIYISNLPPDVT++ELR+LFGGIGQVGRIKQKRGYKD
Sbjct: 299  STTEAPVKVKQCDENCGDSCDNSRIYISNLPPDVTVDELRELFGGIGQVGRIKQKRGYKD 358

Query: 1296 QWPWNIKIYTDENGNNKGDACLAYEDPSAAHSAGGFFNNYELRGYKISVTMAEKSAPRAP 1475
            QWPWNIKIYTDE GNNKGDACL+YEDPSAAHSAGGF+NNYE+RGYKI+V MAEKSAPRAP
Sbjct: 359  QWPWNIKIYTDEGGNNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAP 418

Query: 1476 ---AXXXXXXXXXXXXXXXXXXXXXXXVSGPDRRDHYSGNRSRPY 1601
                                        SGPDR  H+ GNRSRPY
Sbjct: 419  PAFGHGGGGRGGYGGGDRRRDNYRDNAGSGPDRH-HHGGNRSRPY 462



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +3

Query: 546 DWRCPNQSCGNLNFARRTECNKCGTPSPTGA 638
           DW CPN SCGNLNFARR ECNKCG PSP GA
Sbjct: 99  DWLCPNPSCGNLNFARRVECNKCGAPSPAGA 129


Top