BLASTX nr result

ID: Glycyrrhiza24_contig00007234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007234
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780...   224   9e-57
ref|XP_003525263.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   211   1e-52
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47
ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...   185   6e-45
ref|XP_004139339.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   179   3e-43

>ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780157 [Glycine max]
          Length = 733

 Score =  224 bits (571), Expect = 9e-57
 Identities = 108/144 (75%), Positives = 115/144 (79%), Gaps = 3/144 (2%)
 Frame = -2

Query: 424 TPEKNGHLDDASKSTEPLQKSLKSGPKKELLRTSFDK---NVSSKSRMXXXXXXXXXXXX 254
           TPEKNGH DDAS+S+E LQ+ LKSGPKKE+LRT FDK   N+SSKSRM            
Sbjct: 38  TPEKNGHSDDASRSSELLQEFLKSGPKKEILRTCFDKDKKNISSKSRMAETKSTSKIAKK 97

Query: 253 XXXXXASGLSNQPSRKQNRKGENPTRFVPVSDLPSDFGHSNSWICKNSACRAVLSKDDTF 74
                 SG+SNQPSRKQ+RKGENP RFVP  D PSDFGHSNSWICKNSACRAVLSKDDTF
Sbjct: 98  QDSKKVSGISNQPSRKQHRKGENPVRFVPTPDPPSDFGHSNSWICKNSACRAVLSKDDTF 157

Query: 73  CRRCSCCICHLFDDNKDPSLWLVC 2
           CRRCSCCICHLFDDNKDPSLWLVC
Sbjct: 158 CRRCSCCICHLFDDNKDPSLWLVC 181


>ref|XP_003525263.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 714

 Score =  211 bits (536), Expect = 1e-52
 Identities = 107/167 (64%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
 Frame = -2

Query: 493 MDLEEKFLAKXXXXXXXXXXXXSTPEKNGHLDDASKSTEPLQKSLKSGPKKELLRTSFDK 314
           MDLEEKFLAK            STPEKNGH D ASKS+E LQ+ LK GPKKELL+  FDK
Sbjct: 1   MDLEEKFLAKVSGVQSLSSSVQSTPEKNGHSDGASKSSELLQQFLKCGPKKELLQMCFDK 60

Query: 313 N---VSSKSRMXXXXXXXXXXXXXXXXXASGLSNQPSRKQNRKGENPTRFVPVSDLPSDF 143
           +   +SSK RM                  S  S+QP RKQ RKGENPTR +P  D  SDF
Sbjct: 61  DKKSISSKGRMSETKSTSKITKKQDTKKVSSFSHQPPRKQPRKGENPTRIIPPLDQSSDF 120

Query: 142 GHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVC 2
           GHSN+WICKN+ACRAVLS DDTFCRRCSCCICHLFDDNKDPSLWLVC
Sbjct: 121 GHSNTWICKNAACRAVLSMDDTFCRRCSCCICHLFDDNKDPSLWLVC 167


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  193 bits (491), Expect = 2e-47
 Identities = 105/171 (61%), Positives = 115/171 (67%), Gaps = 7/171 (4%)
 Frame = -2

Query: 493 MDLEEKFLAKXXXXXXXXXXXXSTPEKNGHLDDASKSTEPLQKSLKSGPKKELLRTSFDK 314
           MDLE+ FLAK            STPEKNG+ DDAS+S E LQ+ LKSGPKKELLRT  DK
Sbjct: 1   MDLEDTFLAKVSGVQSLSSSVQSTPEKNGNSDDASRSPELLQEFLKSGPKKELLRTCLDK 60

Query: 313 N----VSSKSRMXXXXXXXXXXXXXXXXXASGLS--NQPS-RKQNRKGENPTRFVPVSDL 155
           +     SSKS+M                  +  S  NQPS +KQ RKGENP R VP S+ 
Sbjct: 61  DKKQTASSKSKMTELMKTGNKTTKKQETKKASSSPNNQPSFKKQQRKGENPMRLVPASEQ 120

Query: 154 PSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVC 2
             DFG SNSWICKNSACRAVLS DDTFC+RCSCCICHLFDDNKDPSLWLVC
Sbjct: 121 SPDFGCSNSWICKNSACRAVLSIDDTFCKRCSCCICHLFDDNKDPSLWLVC 171


>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
           gi|223545526|gb|EEF47031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  185 bits (469), Expect = 6e-45
 Identities = 97/148 (65%), Positives = 106/148 (71%), Gaps = 7/148 (4%)
 Frame = -2

Query: 424 TPEKNGHLDDASKSTEPLQKSLKSGPKKELLRTSFDKN----VSSKSRMXXXXXXXXXXX 257
           TPEKNG+ DDAS+S E LQ+ LKSG KKELLRT FDK+     SSKS+            
Sbjct: 28  TPEKNGNSDDASRSPELLQEFLKSGAKKELLRTCFDKDKKHTASSKSKATEVMKTCNKTI 87

Query: 256 XXXXXXASGLS--NQPS-RKQNRKGENPTRFVPVSDLPSDFGHSNSWICKNSACRAVLSK 86
                     S  NQPS +KQ RKGENPTR +P S+ PSDFG SNSWICKNSACRAVLS 
Sbjct: 88  RKQESKKVSSSPINQPSFKKQQRKGENPTRLLPASEQPSDFGCSNSWICKNSACRAVLSI 147

Query: 85  DDTFCRRCSCCICHLFDDNKDPSLWLVC 2
           DDTFC+RCSCCICHLFDDNKDPSLWLVC
Sbjct: 148 DDTFCKRCSCCICHLFDDNKDPSLWLVC 175


>ref|XP_004139339.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus] gi|449531143|ref|XP_004172547.1| PREDICTED:
           protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 718

 Score =  179 bits (455), Expect = 3e-43
 Identities = 97/171 (56%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
 Frame = -2

Query: 493 MDLEEKFLAKXXXXXXXXXXXXSTPEKNGHLDDASKSTEPLQKSLKSGPKKELLRTSFDK 314
           MDLEEKF+++            STP+KNGH DD +KS E LQK LK GPKKE LRT  DK
Sbjct: 1   MDLEEKFMSRVSGVQSLSSSVRSTPDKNGHSDDVTKSPELLQKLLKLGPKKEPLRTLADK 60

Query: 313 N------VSSKSRMXXXXXXXXXXXXXXXXXASGLSNQPS-RKQNRKGENPTRFVPVSDL 155
                    SK                    AS ++NQ S RKQ RK ENP+R   V+D 
Sbjct: 61  EKKTLAPTRSKMTELRRINNKAIKKQDTKKVASSVNNQSSSRKQLRKSENPSRLPIVTDQ 120

Query: 154 PSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVC 2
            SDFGHS+SWICKNSAC+AVLS DDTFC+RCSCCICHL+DDNKDPSLWLVC
Sbjct: 121 SSDFGHSSSWICKNSACKAVLSIDDTFCKRCSCCICHLYDDNKDPSLWLVC 171


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