BLASTX nr result

ID: Glycyrrhiza24_contig00007218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007218
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523256.1| PREDICTED: ABC transporter F family member 5...    80   1e-13
ref|XP_003526834.1| PREDICTED: ABC transporter F family member 5...    74   1e-11
ref|XP_003602495.1| ABC transporter F family member [Medicago tr...    73   2e-11

>ref|XP_003523256.1| PREDICTED: ABC transporter F family member 5-like [Glycine max]
          Length = 696

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 MDFTAKLHHLDLTGAVILHARKPSTQQPRPYLLPRYAARPNNINNTHLIYPNRLFSGPKR 116
           MD  AKLHHLDLTG VIL ARKPS  +   +L PR  +R N   NT+LIY NR FSGP R
Sbjct: 1   MDLAAKLHHLDLTGVVILDARKPSALR---HLPPRVLSRTN--TNTNLIYTNR-FSGPPR 54

Query: 115 PN-YSPPRLSAVAVDDDTSLAQDDIESLFSSDPSVDERQ 2
           PN  S   LS + V       +DDIESLFS   S +ER+
Sbjct: 55  PNSASSTGLSMITV-------EDDIESLFSETNSEEERR 86


>ref|XP_003526834.1| PREDICTED: ABC transporter F family member 5-like [Glycine max]
          Length = 691

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/98 (48%), Positives = 56/98 (57%)
 Frame = -3

Query: 295 MDFTAKLHHLDLTGAVILHARKPSTQQPRPYLLPRYAARPNNINNTHLIYPNRLFSGPKR 116
           MD  AKLH LDLTG VIL ARKPS  +   +L PR   +     NT+LIY NR FSGP R
Sbjct: 1   MDLAAKLHRLDLTGVVILDARKPSVLR---HLPPRILTK----TNTNLIYTNR-FSGPSR 52

Query: 115 PNYSPPRLSAVAVDDDTSLAQDDIESLFSSDPSVDERQ 2
           PN         +    T   +DDIESLFS   S +ER+
Sbjct: 53  PN---------SASSSTITVEDDIESLFSETNSEEERR 81


>ref|XP_003602495.1| ABC transporter F family member [Medicago truncatula]
           gi|355491543|gb|AES72746.1| ABC transporter F family
           member [Medicago truncatula]
          Length = 700

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/98 (48%), Positives = 59/98 (60%)
 Frame = -3

Query: 295 MDFTAKLHHLDLTGAVILHARKPSTQQPRPYLLPRYAARPNNINNTHLIYPNRLFSGPKR 116
           M+  +KLHHLDLTGA IL +R+     PR        A+PN  N      PNR FS  K 
Sbjct: 1   MELASKLHHLDLTGAFILDSRR----LPRTLSHTHLIAKPNTFNTK--TNPNRFFSSKKL 54

Query: 115 PNYSPPRLSAVAVDDDTSLAQDDIESLFSSDPSVDERQ 2
            + S  RLSAVA  D+TS+ +DDIESLF +D S DER+
Sbjct: 55  NHTS--RLSAVAAVDETSVEEDDIESLF-TDTSADERR 89


Top