BLASTX nr result

ID: Glycyrrhiza24_contig00007128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007128
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43440.1| unknown [Medicago truncatula]                          176   2e-42
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   167   6e-40
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   167   6e-40
ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis p...   166   2e-39
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   3e-39

>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/98 (87%), Positives = 87/98 (88%)
 Frame = +2

Query: 2   GNFHLTVQXXXXXXXXXKHKVWLKPQSEMSFLYGNHVLKSALGRITENIAPGDGVVVFSM 181
           GNFHLTVQ         KHKVWLKPQSEMSFLYGNHVLKSALGRITENI  GDGVVVFSM
Sbjct: 85  GNFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKSALGRITENIVSGDGVVVFSM 144

Query: 182 ADVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 295
           +DVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR
Sbjct: 145 SDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 182


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/98 (81%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GNFHLTVQXXXXXXXXXKHKVWLKPQSEMSFLYGNHVLKSALGRITENIAPGDGVVVFSM 181
           G+FHLTVQ         KHKVWLKP SEMSFLYGNHVLK  LGRITENI PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 182 ADVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 295
           +DVPLGFG+AAKSTQDCRKLDPNGIVVLHQ DIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLR 182


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/98 (81%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GNFHLTVQXXXXXXXXXKHKVWLKPQSEMSFLYGNHVLKSALGRITENIAPGDGVVVFSM 181
           G+FHLTVQ         KHKVWLKP SEMSFLYGNHVLK  LGRITENI PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 182 ADVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 295
           +DVPLGFG+AAKSTQDCRKLDPNGIVVLHQ DIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLR 182


>ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Glycine max]
          Length = 187

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/98 (81%), Positives = 85/98 (86%)
 Frame = +2

Query: 2   GNFHLTVQXXXXXXXXXKHKVWLKPQSEMSFLYGNHVLKSALGRITENIAPGDGVVVFSM 181
           G+FHLTVQ         KHKVWLKPQSEMSFLYGNHVLK ALG+++ENIA GDGVVVFSM
Sbjct: 85  GSFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKGALGKLSENIAAGDGVVVFSM 144

Query: 182 ADVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 295
           ADVPLGFGVAAKST DCRKLDPNGIVVLHQ D+GEYLR
Sbjct: 145 ADVPLGFGVAAKSTLDCRKLDPNGIVVLHQADVGEYLR 182


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/98 (81%), Positives = 82/98 (83%)
 Frame = +2

Query: 2   GNFHLTVQXXXXXXXXXKHKVWLKPQSEMSFLYGNHVLKSALGRITENIAPGDGVVVFSM 181
           G FHLTVQ         KHKVWLKP SEMSFLYGNHVLK  LGRITENI  GDGVVVFSM
Sbjct: 85  GKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVAGDGVVVFSM 144

Query: 182 ADVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 295
           +DVPLGFG+AAKSTQDCRKLDPNGIVVLHQ DIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLR 182


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