BLASTX nr result

ID: Glycyrrhiza24_contig00007124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007124
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Gl...   140   1e-31
ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycin...   139   3e-31
ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...   106   4e-21
ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arab...   103   2e-20
ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi...   102   7e-20

>ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Glycine max]
          Length = 250

 Score =  140 bits (354), Expect = 1e-31
 Identities = 87/156 (55%), Positives = 96/156 (61%)
 Frame = -2

Query: 468 MSSAFLKNPITTKVSHIMMQRHFMLTNRSINPIEVPSLLCNKVQSKPYFRLPGFLRKTRE 289
           MSSAFL NP        M+QR  ML NR I+PI+ PS L NK+ S+P F     +RK R+
Sbjct: 1   MSSAFLMNPA-------MIQRQLMLVNRVIHPIKTPSFLSNKIHSRPSFHF--LMRKPRQ 51

Query: 288 YKXXXXXXXXXXXXXXXXXXXXXXXXXSKVGFVGWYLGMIKSRPILTKSVTSGLIYIAAD 109
           Y                          SKVGFV WYLGMIKS PILTKSVTS LIYIAAD
Sbjct: 52  Y--------VISSSFSSSSSSSTATSISKVGFVSWYLGMIKSWPILTKSVTSSLIYIAAD 103

Query: 108 LSSQTIERLSSEPSEPFDIIRTLRMAGYGMVILGPS 1
           LSSQTI R   E SEPFD +RT RMAGYG+VILGPS
Sbjct: 104 LSSQTIVR---ESSEPFDFVRTSRMAGYGIVILGPS 136


>ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycine max]
           gi|255639865|gb|ACU20225.1| unknown [Glycine max]
          Length = 248

 Score =  139 bits (351), Expect = 3e-31
 Identities = 88/156 (56%), Positives = 94/156 (60%)
 Frame = -2

Query: 468 MSSAFLKNPITTKVSHIMMQRHFMLTNRSINPIEVPSLLCNKVQSKPYFRLPGFLRKTRE 289
           MSSAFL NP   K+ H MMQR FML NR+I+PI+ PS                FL+K R+
Sbjct: 1   MSSAFLMNP--AKIPHAMMQRQFMLVNRAIHPIKTPSF--------------HFLKKPRQ 44

Query: 288 YKXXXXXXXXXXXXXXXXXXXXXXXXXSKVGFVGWYLGMIKSRPILTKSVTSGLIYIAAD 109
           Y                          SKVGFVGWYLGMIKS PILTKSVTS LIYIA D
Sbjct: 45  Y---GISSSFCSSSSSSSSSSSAAISISKVGFVGWYLGMIKSWPILTKSVTSSLIYIATD 101

Query: 108 LSSQTIERLSSEPSEPFDIIRTLRMAGYGMVILGPS 1
           LSSQTI R   E SEPFD IRT RMAGYGMVILGPS
Sbjct: 102 LSSQTIVR---ESSEPFDFIRTSRMAGYGMVILGPS 134


>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = -2

Query: 204 KVGFVGWYLGMIKSRPILTKSVTSGLIYIAADLSSQTIERLSSEPSEPFDIIRTLRMAGY 25
           K+GF+GWYLGM+KSRPILTKS TS LIYIAADLSSQTI   S   SEP+D++RTLRMAGY
Sbjct: 11  KIGFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQTI---SLPSSEPYDLVRTLRMAGY 67

Query: 24  GMVILGPS 1
           G++I+GPS
Sbjct: 68  GLLIVGPS 75


>ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp.
           lyrata] gi|297312982|gb|EFH43405.1| hypothetical protein
           ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/115 (50%), Positives = 72/115 (62%)
 Frame = -2

Query: 345 KVQSKPYFRLPGFLRKTREYKXXXXXXXXXXXXXXXXXXXXXXXXXSKVGFVGWYLGMIK 166
           ++QS+PY R P FL K +E                           S  GF+GWYLGM+K
Sbjct: 42  RLQSRPYNRTPQFLGKAKE------------TGVSGFCTSSSSSTVSTAGFIGWYLGMVK 89

Query: 165 SRPILTKSVTSGLIYIAADLSSQTIERLSSEPSEPFDIIRTLRMAGYGMVILGPS 1
           SRP+LTKSVTS LIYIAADLSSQTI + S    E +D++RT RMAGYG++ILGP+
Sbjct: 90  SRPVLTKSVTSSLIYIAADLSSQTIPQAS---VESYDLVRTARMAGYGLLILGPT 141


>ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis]
           gi|223533132|gb|EEF34890.1| Protein SYM1, putative
           [Ricinus communis]
          Length = 268

 Score =  102 bits (253), Expect = 7e-20
 Identities = 63/148 (42%), Positives = 81/148 (54%)
 Frame = -2

Query: 444 PITTKVSHIMMQRHFMLTNRSINPIEVPSLLCNKVQSKPYFRLPGFLRKTREYKXXXXXX 265
           PITT  S   M RH  +T  +I              S+ + +LP F RK+R++       
Sbjct: 24  PITTINS---MLRHQKITTNTII-----------ANSRTFLKLPYFFRKSRDFSNGFSSS 69

Query: 264 XXXXXXXXXXXXXXXXXXXSKVGFVGWYLGMIKSRPILTKSVTSGLIYIAADLSSQTIER 85
                                  FVGWYLGM+K+RPILTKS T  +IY+AADLSSQTI R
Sbjct: 70  PSFFTSPFSSASQSSSIT---ASFVGWYLGMVKTRPILTKSATCAVIYVAADLSSQTIAR 126

Query: 84  LSSEPSEPFDIIRTLRMAGYGMVILGPS 1
                SEP+D++RTLRMAGYGM++LGP+
Sbjct: 127 ---PVSEPYDLVRTLRMAGYGMLVLGPT 151


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