BLASTX nr result
ID: Glycyrrhiza24_contig00007103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00007103
(1876 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588655.1| Pentatricopeptide repeat-containing protein ... 865 0.0
ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containi... 858 0.0
ref|XP_003549200.1| PREDICTED: pentatricopeptide repeat-containi... 810 0.0
ref|XP_003588656.1| Pentatricopeptide repeat-containing protein ... 802 0.0
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,... 704 0.0
>ref|XP_003588655.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477703|gb|AES58906.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 639
Score = 865 bits (2234), Expect = 0.0
Identities = 441/545 (80%), Positives = 478/545 (87%)
Frame = -2
Query: 1635 APLRRRLVRTATPTKTNLKHLTSRIVQLTRRKQLRQILYEVEDAKKHFGKLNTIVMNAVM 1456
+P+RRRL TP KTNLKHLTSRIVQL+RRKQLRQIL E+E AKK FGKLNTIV NAVM
Sbjct: 24 SPIRRRLF--TTPRKTNLKHLTSRIVQLSRRKQLRQILNEIEVAKKRFGKLNTIVKNAVM 81
Query: 1455 EACVRCGDIDSALRIFGEMKNPKSCGVDTVTYATLLKGLGKARRIDEAFQLLESVENGTA 1276
EACVRCGDIDSAL IF EMKNP +CGVDTVTYATLLKGLGKA R DEAF+LLESVENGTA
Sbjct: 82 EACVRCGDIDSALNIFDEMKNPDACGVDTVTYATLLKGLGKAHRFDEAFRLLESVENGTA 141
Query: 1275 MGSPKLSAQLVFGLLNALIEVGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINSG 1096
+G+PKLSA LVFGLLNAL E GDLRRANGLLA YG VLREG +FSVSVYN+L+KG+INSG
Sbjct: 142 VGNPKLSAPLVFGLLNALAEAGDLRRANGLLACYGSVLREGEHFSVSVYNLLIKGHINSG 201
Query: 1095 CPHTAIDMLSEISHQGIMPDRLTYNTLILACVKSEKLEVAMQLFEEMKGKAQKFIHADLF 916
CPHTAI+ML+EI HQGIMPDRLTYNTLILACV+SEKL+VAMQLF EMK KAQ+FIH DLF
Sbjct: 202 CPHTAINMLNEILHQGIMPDRLTYNTLILACVQSEKLDVAMQLFGEMKEKAQEFIHDDLF 261
Query: 915 PDIVTYTTLLKGFGQAKDLGSVLKIVLEMKSCYELGIDRTAYTAIVDALLKCGSVKGALC 736
PDIVTYTTLLKG GQAKDL SV++IVLEMKSC +L IDRTAYTAIVDALLKCGSVKGALC
Sbjct: 262 PDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDRTAYTAIVDALLKCGSVKGALC 321
Query: 735 IFGEIHKQAGWNSELRPKPHLYLSMMRAFAFQGDYDLVKNLHKRIWLDTAGTILLVSQEE 556
IFGEI KQ GWN ELRPKPHLYLSMMRAFAF+GDYDLVKNLHKRI DT+GTIL VSQEE
Sbjct: 322 IFGEIQKQVGWNPELRPKPHLYLSMMRAFAFRGDYDLVKNLHKRILPDTSGTILPVSQEE 381
Query: 555 ADHLLMEAALNAGQVDVAIKTLTDIVSRWKGITWASRGGMVASRIEAILGFSKSLFSPFL 376
ADHLLMEAALNAGQVDVA KTL IVSRWKGI+W S GGMVASRIEA+ GFS SLF+PFL
Sbjct: 382 ADHLLMEAALNAGQVDVATKTLMYIVSRWKGISWTSHGGMVASRIEALSGFSASLFNPFL 441
Query: 375 LPQVSPSEPVEGFMIPFEATRPLQGTIKLRKVVMRFFNDAVVPIVDEWGSCTGLLHREDC 196
LPQVSPSEP+EGFM+PF+ATRPL GTIKL+ VV RFFNDAVVPIVDEWGSCTGLLHR+DC
Sbjct: 442 LPQVSPSEPIEGFMMPFKATRPLLGTIKLKDVVSRFFNDAVVPIVDEWGSCTGLLHRKDC 501
Query: 195 NQLDSPLXXXXXXXXXXXXXXXPIGHVVNLILQKRYPMVVIVNHTDLYATSYSCRVVGVF 16
QLD+PL +GHV++LIL+K YPMV+I+N TD YATSY CR VGVF
Sbjct: 502 TQLDAPLSTMMRSPPPSVAASTSVGHVIDLILEKGYPMVIILNCTDSYATSYGCRAVGVF 561
Query: 15 TSEQL 1
T EQL
Sbjct: 562 TLEQL 566
>ref|XP_003545545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g10690-like
[Glycine max]
Length = 590
Score = 858 bits (2217), Expect = 0.0
Identities = 439/547 (80%), Positives = 482/547 (88%), Gaps = 2/547 (0%)
Frame = -2
Query: 1635 APLRRRLVRTATPTKT-NLKHLTSRIVQLTRRKQLRQILYEVEDAKKHFGKLNTIVMNAV 1459
AP RRRLV+TA P + NL+HLTSRIVQLTRRKQLRQIL EVE AKKHFGKLN+IVMNAV
Sbjct: 29 APTRRRLVKTAAPQEPKNLRHLTSRIVQLTRRKQLRQILDEVEVAKKHFGKLNSIVMNAV 88
Query: 1458 MEACVRCGDIDSALRIFGEMKNPKSCGVDTVTYATLLKGLGKARRIDEAFQLLESVENGT 1279
+EACVRCGDIDSA+RIF EMK CGVDTVTYATLLKGLG+ARR+DEAF+LLE+VENGT
Sbjct: 89 VEACVRCGDIDSAIRIFDEMKKRDGCGVDTVTYATLLKGLGEARRVDEAFELLETVENGT 148
Query: 1278 AMGSPKLSAQLVFGLLNALIEVGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINS 1099
A GSP LSA L+FGLLNALI+ GDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINS
Sbjct: 149 ATGSPNLSAPLIFGLLNALIKTGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINS 208
Query: 1098 GCPHTAIDMLSEISHQGIMPDRLTYNTLILACVKSEKLEVAMQLFEEMKGKAQKFIHADL 919
GCPHTAI+ML+EI QGIMPDRLTYNTLILACV+S KL+ AMQ FEEMKGKAQKF + DL
Sbjct: 209 GCPHTAINMLNEILRQGIMPDRLTYNTLILACVQSGKLDAAMQFFEEMKGKAQKFSNHDL 268
Query: 918 FPDIVTYTTLLKGFGQAKDLGSVLKIVLEMKSCYELGIDRTAYTAIVDALLKCGSVKGAL 739
FPDIVTYTT+LKGFGQ KDL +VLKIVLEMKS EL IDRTAYTAI+DA LKCGSVKGAL
Sbjct: 269 FPDIVTYTTMLKGFGQTKDLATVLKIVLEMKSHRELYIDRTAYTAIIDAFLKCGSVKGAL 328
Query: 738 CIFGEIHKQAGWNSELRPKPHLYLSMMRAFAFQGDYDLVKNLHKRIWLDTAGTILLVSQE 559
CIFGEI KQ G N EL+PKPHLYLS+MRAFAF GDY LVK LHKRIW D+AGTILLV+QE
Sbjct: 329 CIFGEILKQTGLNPELKPKPHLYLSLMRAFAFLGDYYLVKKLHKRIWPDSAGTILLVAQE 388
Query: 558 EADHLLMEAALNAGQVDVAIKTLTDIVSRWKGITWASRGGMVASRIEAILGFSKSLFSPF 379
EADHLLMEAALNAGQV+VA+KTLT+IVS+WKGI+W SRGGMVA RIEA+LGFSKSLFSP
Sbjct: 389 EADHLLMEAALNAGQVNVAVKTLTEIVSKWKGISWTSRGGMVAYRIEALLGFSKSLFSPH 448
Query: 378 LLPQVSPSEPVEGFMIPFEATRPLQGTIKLRKVVMRFFNDAVVPIVDEWGSCTGLLHRED 199
LLPQVSPSEPVE +MI FEATRPLQG+IKLRKVVMRFF +AVVPIVDEWGSCTGLLHRED
Sbjct: 449 LLPQVSPSEPVENYMIQFEATRPLQGSIKLRKVVMRFFYEAVVPIVDEWGSCTGLLHRED 508
Query: 198 CNQLDSPLXXXXXXXXXXXXXXXPIGHVVNLILQKRYPMVVIVNHTDLYATS-YSCRVVG 22
C +LD+PL IGHVV+LIL+KRYPM+++VN+ + YAT+ YS R VG
Sbjct: 509 CIELDAPLTTMMRSPPPTVTTSTSIGHVVDLILEKRYPMIIVVNYRNSYATTPYSSRAVG 568
Query: 21 VFTSEQL 1
VFTSEQL
Sbjct: 569 VFTSEQL 575
>ref|XP_003549200.1| PREDICTED: pentatricopeptide repeat-containing protein At5g10690-like
[Glycine max]
Length = 558
Score = 810 bits (2093), Expect = 0.0
Identities = 412/520 (79%), Positives = 454/520 (87%), Gaps = 1/520 (0%)
Frame = -2
Query: 1557 QLTRRKQLRQILYEVEDAKKHFGKLNTIVMNAVMEACVRCGDIDSALRIFGEMKNPKSCG 1378
+LTR+K++ +IL EVE A KHFGKLNTIVMNAV+EACVRCGDIDSA+RIF MK CG
Sbjct: 19 KLTRKKEISRILDEVEVANKHFGKLNTIVMNAVVEACVRCGDIDSAIRIFDGMKKRDGCG 78
Query: 1377 VDTVTYATLLKGLGKARRIDEAFQLLESVENGTAMGSPKLSAQLVFGLLNALIEVGDLRR 1198
VDTVTYATLLKGLG+ARR+DEAF+LLE+VENGT MGSP LSA L+FGLLNALI+ GDLRR
Sbjct: 79 VDTVTYATLLKGLGEARRVDEAFELLETVENGTVMGSPNLSAPLIFGLLNALIKTGDLRR 138
Query: 1197 ANGLLARYGFVLREGGNFSVSVYNILMKGYINSGCPHTAIDMLSEISHQGIMPDRLTYNT 1018
ANGLLA YGFVLREG NF VSVYNILMKGYINSGCPHTAI+ML+EI QGIMPDRLTYNT
Sbjct: 139 ANGLLACYGFVLREGDNFPVSVYNILMKGYINSGCPHTAINMLNEILRQGIMPDRLTYNT 198
Query: 1017 LILACVKSEKLEVAMQLFEEMKGKAQKFIHADLFPDIVTYTTLLKGFGQAKDLGSVLKIV 838
LILACV+S KL+ AMQ F EMKG+AQKF++ DLFPDIVTYTT+LKGFG+ KDL SVLKIV
Sbjct: 199 LILACVESGKLDAAMQFFGEMKGEAQKFVNDDLFPDIVTYTTMLKGFGRMKDLASVLKIV 258
Query: 837 LEMKSCYELGIDRTAYTAIVDALLKCGSVKGALCIFGEIHKQAGWNSELRPKPHLYLSMM 658
LEMKSC EL IDRTAYT IVD LKCGSVKGALCIFGEI KQAG N ELRPKPHLYLSMM
Sbjct: 259 LEMKSCRELYIDRTAYTEIVDVFLKCGSVKGALCIFGEILKQAGLNPELRPKPHLYLSMM 318
Query: 657 RAFAFQGDYDLVKNLHKRIWLDTAGTILLVSQEEADHLLMEAALNAGQVDVAIKTLTDIV 478
RAFAF GDYDLVK LHKRIW D+AGTILLV+QEEADHLLMEAALNAGQV+VAIKTLT+IV
Sbjct: 319 RAFAFLGDYDLVKKLHKRIWPDSAGTILLVAQEEADHLLMEAALNAGQVNVAIKTLTEIV 378
Query: 477 SRWKGITWASRGGMVASRIEAILGFSKSLFSPFLLPQVSPSEPVEGFMIPFEATRPLQGT 298
SRWKGI+W SRGGMVA IEA+LGFSKSLFSP LLPQVSPSEPVE +MI FEATRPLQGT
Sbjct: 379 SRWKGISWTSRGGMVAYCIEAMLGFSKSLFSPHLLPQVSPSEPVENYMIQFEATRPLQGT 438
Query: 297 IKLRKVVMRFFNDAVVPIVDEWGSCTGLLHREDCNQLDSPLXXXXXXXXXXXXXXXPIGH 118
IKLRKVVMRFF++AVVPIVDEW SCTGL HREDCNQLD+PL +G+
Sbjct: 439 IKLRKVVMRFFHEAVVPIVDEWESCTGLFHREDCNQLDAPLTTMMRSPPPIVTTSTSVGY 498
Query: 117 VVNLILQKRYPMVVIVNHTDLYATS-YSCRVVGVFTSEQL 1
VV+LIL+KRYPMV++VN+ + YAT+ YS R VGVFTS+QL
Sbjct: 499 VVDLILEKRYPMVIVVNYRNSYATTQYSSRAVGVFTSDQL 538
>ref|XP_003588656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477704|gb|AES58907.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 627
Score = 802 bits (2071), Expect = 0.0
Identities = 417/545 (76%), Positives = 454/545 (83%)
Frame = -2
Query: 1635 APLRRRLVRTATPTKTNLKHLTSRIVQLTRRKQLRQILYEVEDAKKHFGKLNTIVMNAVM 1456
+P+RRRL TP KTNLKHLTSRIVQL+RRKQLRQIL E+E AKK FGKLNTIV NAVM
Sbjct: 24 SPIRRRLF--TTPRKTNLKHLTSRIVQLSRRKQLRQILNEIEVAKKRFGKLNTIVKNAVM 81
Query: 1455 EACVRCGDIDSALRIFGEMKNPKSCGVDTVTYATLLKGLGKARRIDEAFQLLESVENGTA 1276
EACVRCGDIDSAL IF EMKNP +CGVDTVTYATLLKGLGKA R DEAF+LLESVENGTA
Sbjct: 82 EACVRCGDIDSALNIFDEMKNPDACGVDTVTYATLLKGLGKAHRFDEAFRLLESVENGTA 141
Query: 1275 MGSPKLSAQLVFGLLNALIEVGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINSG 1096
+G+PKLSA LVFGLLNAL E + + VL +KG+INSG
Sbjct: 142 VGNPKLSAPLVFGLLNALAEAVQETCVVQMASLPVMVL------------CFVKGHINSG 189
Query: 1095 CPHTAIDMLSEISHQGIMPDRLTYNTLILACVKSEKLEVAMQLFEEMKGKAQKFIHADLF 916
CPHTAI+ML+EI HQGIMPDRLTYNTLILACV+SEKL+VAMQLF EMK KAQ+FIH DLF
Sbjct: 190 CPHTAINMLNEILHQGIMPDRLTYNTLILACVQSEKLDVAMQLFGEMKEKAQEFIHDDLF 249
Query: 915 PDIVTYTTLLKGFGQAKDLGSVLKIVLEMKSCYELGIDRTAYTAIVDALLKCGSVKGALC 736
PDIVTYTTLLKG GQAKDL SV++IVLEMKSC +L IDRTAYTAIVDALLKCGSVKGALC
Sbjct: 250 PDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDRTAYTAIVDALLKCGSVKGALC 309
Query: 735 IFGEIHKQAGWNSELRPKPHLYLSMMRAFAFQGDYDLVKNLHKRIWLDTAGTILLVSQEE 556
IFGEI KQ GWN ELRPKPHLYLSMMRAFAF+GDYDLVKNLHKRI DT+GTIL VSQEE
Sbjct: 310 IFGEIQKQVGWNPELRPKPHLYLSMMRAFAFRGDYDLVKNLHKRILPDTSGTILPVSQEE 369
Query: 555 ADHLLMEAALNAGQVDVAIKTLTDIVSRWKGITWASRGGMVASRIEAILGFSKSLFSPFL 376
ADHLLMEAALNAGQVDVA KTL IVSRWKGI+W S GGMVASRIEA+ GFS SLF+PFL
Sbjct: 370 ADHLLMEAALNAGQVDVATKTLMYIVSRWKGISWTSHGGMVASRIEALSGFSASLFNPFL 429
Query: 375 LPQVSPSEPVEGFMIPFEATRPLQGTIKLRKVVMRFFNDAVVPIVDEWGSCTGLLHREDC 196
LPQVSPSEP+EGFM+PF+ATRPL GTIKL+ VV RFFNDAVVPIVDEWGSCTGLLHR+DC
Sbjct: 430 LPQVSPSEPIEGFMMPFKATRPLLGTIKLKDVVSRFFNDAVVPIVDEWGSCTGLLHRKDC 489
Query: 195 NQLDSPLXXXXXXXXXXXXXXXPIGHVVNLILQKRYPMVVIVNHTDLYATSYSCRVVGVF 16
QLD+PL +GHV++LIL+K YPMV+I+N TD YATSY CR VGVF
Sbjct: 490 TQLDAPLSTMMRSPPPSVAASTSVGHVIDLILEKGYPMVIILNCTDSYATSYGCRAVGVF 549
Query: 15 TSEQL 1
T EQL
Sbjct: 550 TLEQL 554
>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 600
Score = 704 bits (1818), Expect = 0.0
Identities = 356/546 (65%), Positives = 432/546 (79%), Gaps = 2/546 (0%)
Frame = -2
Query: 1632 PLRRRLVRTATPTK-TNLKHLTSRIVQLTRRKQLRQILYEVEDAKKHFGKLNTIVMNAVM 1456
P RRRL++ ++ +NLK LTSR+VQLTRR+QL+QI E+E AK FGKLN IVMNAVM
Sbjct: 28 PTRRRLLKIHPRSRNSNLKQLTSRVVQLTRRRQLQQIFEEIEVAKTRFGKLNKIVMNAVM 87
Query: 1455 EACVRCGDIDSALRIFGEMKNPKSCGVDTVTYATLLKGLGKARRIDEAFQLLESVENGTA 1276
EACV CG+IDSALR+F EM P S GVD VTY TLLKGLG+ARRIDEAFQ+LES+E G+A
Sbjct: 88 EACVHCGNIDSALRLFEEMSKPGSSGVDGVTYGTLLKGLGEARRIDEAFQILESLEQGSA 147
Query: 1275 MGSPKLSAQLVFGLLNALIEVGDLRRANGLLARYGFVLREGGNFSVSVYNILMKGYINSG 1096
G+ KLSA +V GLLNA+IE GDLRRANGLLARYGF+LREGG+ V +YN+LMKGYIN+G
Sbjct: 148 KGNVKLSAPIVVGLLNAIIEAGDLRRANGLLARYGFLLREGGSAPVLIYNLLMKGYINAG 207
Query: 1095 CPHTAIDMLSEISHQGIMPDRLTYNTLILACVKSEKLEVAMQLFEEMKGKAQKFIHADLF 916
CP A+ M +EI G+ PDRLTYNTLILACVKS+ L+ AM FEEMK +A++ + +L+
Sbjct: 208 CPQAAVAMRNEILQLGLTPDRLTYNTLILACVKSKSLDAAMSFFEEMKDEARQTNNVNLY 267
Query: 915 PDIVTYTTLLKGFGQAKDLGSVLKIVLEMKSCYELGIDRTAYTAIVDALLKCGSVKGALC 736
PD+VTYTTLLKGFG AKDLGSV IVLEMK + L IDRT +TA+VDALL GS+KGALC
Sbjct: 268 PDVVTYTTLLKGFGNAKDLGSVKMIVLEMKLYHNLFIDRTGFTAMVDALLNSGSIKGALC 327
Query: 735 IFGEIHKQAGWNSELRPKPHLYLSMMRAFAFQGDYDLVKNLHKRIWLDTAGTILLVSQEE 556
IFGEI K+AG N +LRPKPHLYLSMMRAFA QGDY +VKNLHKR+W D+ GTI Q+E
Sbjct: 328 IFGEIIKRAGVNPDLRPKPHLYLSMMRAFAVQGDYSMVKNLHKRLWPDSTGTISPAIQQE 387
Query: 555 ADHLLMEAALNAGQVDVAIKTLTDIVSRWKGITWASRGGMVASRIEAILGFSKSLFSPFL 376
ADHLLMEAALN GQVD A++ L I+ RW GI+W +RGGMVA RIEA+LGF KS+FSP+L
Sbjct: 388 ADHLLMEAALNGGQVDAALENLRKIIPRWNGISWTNRGGMVAVRIEALLGFRKSIFSPYL 447
Query: 375 LPQVSPSEPVEGFMIPFEATRPLQGTIKLRKVVMRFFNDAVVPIVDEWGSCTGLLHREDC 196
LPQ+S SEP+E M P E +PL GT++L+KVVMRFF D VVPI+D+WG+C GLLHREDC
Sbjct: 448 LPQISSSEPIETIMTPLEEAQPLLGTLELKKVVMRFFRDEVVPIMDDWGNCIGLLHREDC 507
Query: 195 NQLDSPLXXXXXXXXXXXXXXXPIGHVVNLILQKRYPMVVIVNHTDLYATSY-SCRVVGV 19
+L++ L IGHVV+LIL K+Y MVV++ +++L + +Y S R VGV
Sbjct: 508 TELNATLATMMRSPPPCVTTMTSIGHVVDLILDKKYRMVVVIKYSNLDSITYSSSRAVGV 567
Query: 18 FTSEQL 1
FT+E+L
Sbjct: 568 FTAEKL 573