BLASTX nr result

ID: Glycyrrhiza24_contig00007057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007057
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycin...   494   e-137
ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Gl...   489   e-136
gb|AFK36510.1| unknown [Lotus japonicus]                              471   e-130
ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cu...   440   e-121
ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus ...   434   e-119

>ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycine max]
           gi|255635327|gb|ACU18017.1| unknown [Glycine max]
          Length = 312

 Score =  494 bits (1271), Expect = e-137
 Identities = 253/316 (80%), Positives = 274/316 (86%), Gaps = 1/316 (0%)
 Frame = +2

Query: 53  MAALISKXXXXXXXXXXXXXXXC-FDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLL 229
           MAALISK               C FDSP AGFAS YK  D+CSSLSGE ++ A R    L
Sbjct: 1   MAALISKRILRCSSWSLHSLGRCYFDSPSAGFASIYKPRDVCSSLSGERMLPADRS---L 57

Query: 230 AGSMIQRFSTSILTPGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFM 409
             SM+++FSTSILTPG D+ AFPSDLLS K LAT+ERT+GLCQDLLIPVTNF NEDKG+M
Sbjct: 58  VRSMVRQFSTSILTPGADDSAFPSDLLSKKTLATSERTIGLCQDLLIPVTNFHNEDKGYM 117

Query: 410 VLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGT 589
           V  GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKT+SEVSGTG+KPWNQKG+GRARHG+
Sbjct: 118 VFPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGS 177

Query: 590 LRGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTK 769
           LRGPQFRGGAT HGPKPRSHAFK+NKKVR LGLKIALSARAAEGKLLVFEDLEVPTHKTK
Sbjct: 178 LRGPQFRGGATMHGPKPRSHAFKVNKKVRCLGLKIALSARAAEGKLLVFEDLEVPTHKTK 237

Query: 770 NIVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYINVLPSIGLNVYSILLHDTLVMSR 949
           NIVNY+ QMEDTKKLLLVDG+ I+EKLKL+TQNLHY+NVLPSIGLNVYSILLHDTLVMSR
Sbjct: 238 NIVNYYNQMEDTKKLLLVDGT-IDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSR 296

Query: 950 DAVTRIVERMRTPINR 997
            AVT+IVERM TPINR
Sbjct: 297 AAVTKIVERMHTPINR 312


>ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Glycine max]
          Length = 310

 Score =  489 bits (1259), Expect = e-136
 Identities = 252/316 (79%), Positives = 273/316 (86%), Gaps = 1/316 (0%)
 Frame = +2

Query: 53  MAALISKXXXXXXXXXXXXXXXC-FDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLL 229
           MAALISK               C FDSP  GFAS YK  D+C  LSGE + SA R    L
Sbjct: 1   MAALISKRILRCSSGSLHSLGRCYFDSP--GFASIYKPRDVCGGLSGERMFSADRS---L 55

Query: 230 AGSMIQRFSTSILTPGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFM 409
            GSM+++FSTSILTPG D+ AFPSDLLS K LAT+ERT+GLCQDLLIPVTNF NEDKG+M
Sbjct: 56  VGSMVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYM 115

Query: 410 VLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGT 589
           VL GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKT+SEVSGTG+KPWNQKG+GRARHG+
Sbjct: 116 VLPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGS 175

Query: 590 LRGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTK 769
           LRGPQFRGGAT HGPKPRSHAFK+NKKVRRLGLKIALSARAAEGKLLVFEDL VPTHKTK
Sbjct: 176 LRGPQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKLLVFEDLAVPTHKTK 235

Query: 770 NIVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYINVLPSIGLNVYSILLHDTLVMSR 949
           NIVNY+ QMEDTKKLLLVDG+ I+EKLKL+TQNLHY+NVLPSIGLNVYSILLHDTLVMSR
Sbjct: 236 NIVNYYNQMEDTKKLLLVDGA-IDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSR 294

Query: 950 DAVTRIVERMRTPINR 997
            AV++IVERM TPINR
Sbjct: 295 AAVSKIVERMHTPINR 310


>gb|AFK36510.1| unknown [Lotus japonicus]
          Length = 305

 Score =  471 bits (1211), Expect = e-130
 Identities = 245/315 (77%), Positives = 262/315 (83%)
 Frame = +2

Query: 53  MAALISKXXXXXXXXXXXXXXXCFDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLLA 232
           MAALISK               CF          ++S DICSSLSGE   SAQRPGLLLA
Sbjct: 1   MAALISKRLLRSSESLHSLGRRCF----------HQSRDICSSLSGERRFSAQRPGLLLA 50

Query: 233 GSMIQRFSTSILTPGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFMV 412
            SMIQRF TS+  PG  EGAFPSDLLS KPLAT+ER +GLCQDLLIPVTNF NEDKG MV
Sbjct: 51  RSMIQRFCTSVSVPGYHEGAFPSDLLSNKPLATSERDIGLCQDLLIPVTNFHNEDKGLMV 110

Query: 413 LAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGTL 592
           LAGDVFD+PIRKDIIHRVVRWQLA+RQQGTHSTKTVSEV GTG+K + QKG G+ARHG+ 
Sbjct: 111 LAGDVFDVPIRKDIIHRVVRWQLARRQQGTHSTKTVSEVRGTGRKMYKQKGLGKARHGSQ 170

Query: 593 RGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKN 772
           R   FRGGA  HGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDL+V THKTKN
Sbjct: 171 RVHLFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVLTHKTKN 230

Query: 773 IVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYINVLPSIGLNVYSILLHDTLVMSRD 952
           IVNYF+QMED+KKLLLVDG PINEKLKLATQNLHY+NVLPSIGLNVYSILLHDTLVMSRD
Sbjct: 231 IVNYFKQMEDSKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 290

Query: 953 AVTRIVERMRTPINR 997
           AV +IVERM TPI+R
Sbjct: 291 AVNKIVERMHTPISR 305


>ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
           gi|449531047|ref|XP_004172499.1| PREDICTED: 50S
           ribosomal protein L4-like [Cucumis sativus]
          Length = 315

 Score =  440 bits (1131), Expect = e-121
 Identities = 223/285 (78%), Positives = 244/285 (85%), Gaps = 2/285 (0%)
 Frame = +2

Query: 149 SFYKSHDICSSLSGESLISAQRPGLLLAGSMI--QRFSTSILTPGPDEGAFPSDLLSTKP 322
           SF   H+I   +SG S   A R  LL AGS +  + F TSILTP     AFPS+LLS KP
Sbjct: 31  SFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKP 90

Query: 323 LATAERTLGLCQDLLIPVTNFRNEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT 502
           +A+ ER +GL QDL+IPVTNF NEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT
Sbjct: 91  VASEERKIGLYQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT 150

Query: 503 HSTKTVSEVSGTGKKPWNQKGSGRARHGTLRGPQFRGGATKHGPKPRSHAFKLNKKVRRL 682
           HSTKT+SEVSGTG+KPW QKG+GRARHGTLRGPQFRGGAT HGPKPRSHAFKLNKKVRRL
Sbjct: 151 HSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRL 210

Query: 683 GLKIALSARAAEGKLLVFEDLEVPTHKTKNIVNYFQQMEDTKKLLLVDGSPINEKLKLAT 862
           GL IALSAR AEGKLLVF++L+V THKTKN+V Y  +ME+TKK+LLVDG PI+EKLKLAT
Sbjct: 211 GLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLAT 270

Query: 863 QNLHYINVLPSIGLNVYSILLHDTLVMSRDAVTRIVERMRTPINR 997
           QNLHY+NVLPSIGLNVYSILLHDTLVMSRDAV RIV RM TPINR
Sbjct: 271 QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRMHTPINR 315


>ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
           gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4,
           putative [Ricinus communis]
          Length = 294

 Score =  434 bits (1116), Expect = e-119
 Identities = 215/251 (85%), Positives = 231/251 (92%)
 Frame = +2

Query: 245 QRFSTSILTPGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFMVLAGD 424
           ++ STSILTPG  + AFPSDLLSTK L T ER +GL +DL+IPVTNF NEDKGFMVLAGD
Sbjct: 44  RKLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLVIPVTNFLNEDKGFMVLAGD 103

Query: 425 VFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGTLRGPQ 604
           VFD+PI+K IIHRVVRWQLAKRQQGTHSTKT+SEVSGTGKKP+ QKG+GRARHGTLRGPQ
Sbjct: 104 VFDVPIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRARHGTLRGPQ 163

Query: 605 FRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVNY 784
           FRGGAT HGPKPRSHA K NKKVRRLGLKIAL+ARAAEGKLLVFEDLE+PTHKTKNIVNY
Sbjct: 164 FRGGATMHGPKPRSHAIKCNKKVRRLGLKIALTARAAEGKLLVFEDLEIPTHKTKNIVNY 223

Query: 785 FQQMEDTKKLLLVDGSPINEKLKLATQNLHYINVLPSIGLNVYSILLHDTLVMSRDAVTR 964
            +QME+TKKLLLVDG PINEKLKLA QNLHY+NVLPSIGLNVYSILLHDTLVMSRDAV R
Sbjct: 224 VKQMEETKKLLLVDGGPINEKLKLAAQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNR 283

Query: 965 IVERMRTPINR 997
           IVERM TPINR
Sbjct: 284 IVERMHTPINR 294


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