BLASTX nr result

ID: Glycyrrhiza24_contig00007023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00007023
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604866.1| NBS resistance protein-like protein [Medicag...   291   2e-76
ref|XP_003618332.1| Disease resistance-like protein GS6-2, parti...   291   2e-76
ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncat...   212   1e-52
ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicag...   211   2e-52
ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncat...   211   2e-52

>ref|XP_003604866.1| NBS resistance protein-like protein [Medicago truncatula]
            gi|355505921|gb|AES87063.1| NBS resistance protein-like
            protein [Medicago truncatula]
          Length = 1791

 Score =  291 bits (745), Expect = 2e-76
 Identities = 180/381 (47%), Positives = 225/381 (59%), Gaps = 49/381 (12%)
 Frame = +2

Query: 2    PNTTTSQISNMLPSPLIDCHSQVHIPESKNYFKTLSIQMGTKCQGA---DDSILQTTDET 172
            P+ TTS+ S+M  + +ID   QV I  S NY K+L IQMGTKCQ +   +D   QT + +
Sbjct: 1345 PSATTSETSDMYATSIID--GQVRISGSNNYLKSLLIQMGTKCQVSNITEDENFQTAEAS 1402

Query: 173  GDSFVLVCDNNSDWLSFCCKGCSVIFEVPEMKGHNLKRIMLRVVYSSSPHNITSTGFQHI 352
             DSFVL CDNNSDW +F CKGC ++F++P MKG NLK +ML VVY SSP +I S G Q +
Sbjct: 1403 WDSFVLPCDNNSDWQTFRCKGCCIMFDLPTMKGRNLKSMMLFVVYYSSPESIASEGCQGV 1462

Query: 353  LIINYTKTIIQVYKRDTLTSLEDEEWQNITSNLEPGNRXXXXXXXXXXXXXXKTAMYLLY 532
            LIINYTK  IQ YKRDTLTS EDE+WQ+ITSNLEP N+               T + LLY
Sbjct: 1463 LIINYTKATIQAYKRDTLTSFEDEDWQSITSNLEPSNKVEVMVVFEEGFVVQHTEVSLLY 1522

Query: 533  EEETIEKEMDVIVSSDDDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEEDE 712
             +E ++KEM+     ++DD  VIVS    +  D N +VS GD+ DVP D N  I   +D+
Sbjct: 1523 -DEPLDKEMEHCYVVEEDD--VIVS----VYDDKNVSVSSGDNIDVPEDYNA-IGPIQDK 1574

Query: 713  NVSKDKHRHVVGEDVIVSGED-GMAANKNVLVSG-------------------------- 811
            N+S+DKH H V ++ +V G+D  MAANKN  VSG                          
Sbjct: 1575 NISEDKHWHAVDKNAVVPGDDHSMAANKNYAVSGGGVVPADKNVTFYAEDDNVSDNKNGD 1634

Query: 812  ------------------GDHENRSRRLFI-LPSIVKAVLTSRPFWIGLGGILVWITCRH 934
                              G  +NR  R+F  LPS+V+AVL S+PFW  L GILVWIT RH
Sbjct: 1635 AVEYDANGSCIADKNVVSGGDKNRYLRIFTKLPSLVRAVLISQPFWSSLVGILVWITYRH 1694

Query: 935  FKKRRSRNPITRYTQWEKWLV 997
            FKK RS N  TRYT+  KWLV
Sbjct: 1695 FKK-RSPNLFTRYTRRCKWLV 1714


>ref|XP_003618332.1| Disease resistance-like protein GS6-2, partial [Medicago truncatula]
            gi|355493347|gb|AES74550.1| Disease resistance-like
            protein GS6-2, partial [Medicago truncatula]
          Length = 1204

 Score =  291 bits (745), Expect = 2e-76
 Identities = 172/346 (49%), Positives = 217/346 (62%), Gaps = 31/346 (8%)
 Frame = +2

Query: 2    PNTTTSQISNMLPSPLID-CHSQVHIPESKNYFKTLSIQMGTKCQGA---DDSILQTTDE 169
            P+ TTSQIS+M  SPLID C  QV    S NY K++ IQMGTKCQ +   +D   QT + 
Sbjct: 376  PSATTSQISDMYASPLIDDCLGQVRPSGSNNYLKSVLIQMGTKCQVSNITEDENFQTAEA 435

Query: 170  TGDSFVLVCDNNSDWLSFCCKGCSVIFEVPEMKGHNLKRIMLRVVYSSSPHNITSTGFQH 349
            + DSFVL CDNNSDW +F CKGC ++F++P MKG NLK +ML VVY SSP +I S G Q 
Sbjct: 436  SWDSFVLPCDNNSDWQTFRCKGCCIMFDLPTMKGRNLKSMMLFVVYYSSPESIASEGCQG 495

Query: 350  ILIINYTKTIIQVYKRDTLTSLEDEEWQNITSNLEPGNRXXXXXXXXXXXXXXKTAMYLL 529
            +LIINYTK  IQ YKRDTL S EDE+W+N+TS+LEPGN               KT + LL
Sbjct: 496  VLIINYTKATIQAYKRDTLASFEDEDWKNLTSSLEPGNTVEVMAVFAEGFNVEKTTVSLL 555

Query: 530  YEEETIEKEMDVIVSSDDDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEED 709
            Y +E I+KEM+   + D++D  + VSG      + N +VS GD+ DVP D N  I   +D
Sbjct: 556  Y-DEPIDKEMEQCNAGDEED--ITVSG----DVNKNVSVSSGDNIDVPEDYNA-IGPIQD 607

Query: 710  ENVSKDKHRHVVGEDVIVSGED-GMAANKNVLVSGG-------------------DHENR 829
            +N+S+DKH H V ++ +V G+D  MAANKN  VSGG                   D++  
Sbjct: 608  KNISEDKHWHAVDKNAVVPGDDHSMAANKNYAVSGGGVVPADKNVTFYAEDDNVSDNKTG 667

Query: 830  SR------RLFI-LPSIVKAVLTSRPFWIGLGGILVWITCRHFKKR 946
             R      R+F  LPS+V+AVL S+PFW  L GILVWIT RHFKKR
Sbjct: 668  MRWNMIYLRIFTKLPSLVRAVLISQPFWSSLVGILVWITYRHFKKR 713


>ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355505912|gb|AES87054.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 1684

 Score =  212 bits (540), Expect = 1e-52
 Identities = 128/236 (54%), Positives = 154/236 (65%), Gaps = 3/236 (1%)
 Frame = +2

Query: 17   SQISNMLPSPLIDCH-SQVHIPESKNYFKTLSIQMGTKCQGADDSI--LQTTDETGDSFV 187
            S+IS+M  SPLID    +V    S N+ K+L IQMGTKCQ +D ++  LQT DET DSF 
Sbjct: 1336 SEISDMYASPLIDDFLGKVCTSGSMNHLKSLLIQMGTKCQVSDIAVDVLQTADETWDSFF 1395

Query: 188  LVCDNNSDWLSFCCKGCSVIFEVPEMKGHNLKRIMLRVVYSSSPHNITSTGFQHILIINY 367
            L CDNNS+W SF CKGCS+IF++P +KG NLK ++L VVY SS  NITS   Q +LIINY
Sbjct: 1396 LPCDNNSEWSSFSCKGCSIIFDIPTIKGRNLKSMILFVVYYSSSENITSDSCQGVLIINY 1455

Query: 368  TKTIIQVYKRDTLTSLEDEEWQNITSNLEPGNRXXXXXXXXXXXXXXKTAMYLLYEEETI 547
            TK  IQVYKRDTLTS EDE+WQ+ITSNLEPGN+              KT + LLY +E +
Sbjct: 1456 TKRTIQVYKRDTLTSFEDEDWQSITSNLEPGNKVEVMVVFGEGFIVEKTTISLLY-DEPV 1514

Query: 548  EKEMDVIVSSDDDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEEDEN 715
             KEM+     D DD  VIVSG    + DNN  VS G DN+V     +  FGEE  N
Sbjct: 1515 NKEMECCHVVDVDD--VIVSG----NDDNNVGVSSG-DNEV-----INQFGEETPN 1558


>ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
            gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance
            protein [Medicago truncatula]
          Length = 1350

 Score =  211 bits (537), Expect = 2e-52
 Identities = 128/275 (46%), Positives = 165/275 (60%), Gaps = 4/275 (1%)
 Frame = +2

Query: 5    NTTTSQISNMLPSPLID-CHSQVHIPESKNYFKTLSIQMGTKCQG---ADDSILQTTDET 172
            + TTSQIS+M  SPLID C  QV    S NY K++ IQMGTK Q    A D ILQT + T
Sbjct: 1012 SATTSQISDMYASPLIDDCLGQVRPSGSNNYLKSVLIQMGTKHQVPSLAKDRILQTANGT 1071

Query: 173  GDSFVLVCDNNSDWLSFCCKGCSVIFEVPEMKGHNLKRIMLRVVYSSSPHNITSTGFQHI 352
             +SF+    N+S+W +F C+GCS+IF++P MKG NLK +ML V+Y SS  NITS G Q +
Sbjct: 1072 WESFL---HNSSEWKTFSCQGCSIIFDIPTMKGRNLKSMMLSVIYYSSQENITSEGCQGV 1128

Query: 353  LIINYTKTIIQVYKRDTLTSLEDEEWQNITSNLEPGNRXXXXXXXXXXXXXXKTAMYLLY 532
            LIIN+TKT IQ YKRDTL S EDE+W+N+TS+LEPGN               KT + LLY
Sbjct: 1129 LIINHTKTNIQAYKRDTLASFEDEDWKNLTSSLEPGNTVEVMAVFAEGFNVEKTTVSLLY 1188

Query: 533  EEETIEKEMDVIVSSDDDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEEDE 712
             +E I+KEM+   + D++D  V        S D N  ++ GD  DVPV+ N+   GE   
Sbjct: 1189 -DEPIDKEMEQCNAGDEEDITV--------SGDVNKNINVGDYIDVPVNNNISGPGE--- 1236

Query: 713  NVSKDKHRHVVGEDVIVSGEDGMAANKNVLVSGGD 817
                DKH H V  + IVS +D     +    +G D
Sbjct: 1237 ----DKHSHAVNTNCIVSSDDESTDKETEHCNGRD 1267


>ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
            gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1897

 Score =  211 bits (537), Expect = 2e-52
 Identities = 128/275 (46%), Positives = 165/275 (60%), Gaps = 4/275 (1%)
 Frame = +2

Query: 5    NTTTSQISNMLPSPLID-CHSQVHIPESKNYFKTLSIQMGTKCQG---ADDSILQTTDET 172
            + TTSQIS+M  SPLID C  QV    S NY K++ IQMGTK Q    A D ILQT + T
Sbjct: 1398 SATTSQISDMYASPLIDDCLGQVRPSGSNNYLKSVLIQMGTKHQVPSLAKDRILQTANGT 1457

Query: 173  GDSFVLVCDNNSDWLSFCCKGCSVIFEVPEMKGHNLKRIMLRVVYSSSPHNITSTGFQHI 352
             +SF+    N+S+W +F C+GCS+IF++P MKG NLK +ML V+Y SS  NITS G Q +
Sbjct: 1458 WESFL---HNSSEWKTFSCQGCSIIFDIPTMKGRNLKSMMLSVIYYSSQENITSEGCQGV 1514

Query: 353  LIINYTKTIIQVYKRDTLTSLEDEEWQNITSNLEPGNRXXXXXXXXXXXXXXKTAMYLLY 532
            LIIN+TKT IQ YKRDTL S EDE+W+N+TS+LEPGN               KT + LLY
Sbjct: 1515 LIINHTKTNIQAYKRDTLASFEDEDWKNLTSSLEPGNTVEVMAVFAEGFNVEKTTVSLLY 1574

Query: 533  EEETIEKEMDVIVSSDDDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEEDE 712
             +E I+KEM+   + D++D  V        S D N  ++ GD  DVPV+ N+   GE   
Sbjct: 1575 -DEPIDKEMEQCNAGDEEDITV--------SGDVNKNINVGDYIDVPVNNNISGPGE--- 1622

Query: 713  NVSKDKHRHVVGEDVIVSGEDGMAANKNVLVSGGD 817
                DKH H V  + IVS +D     +    +G D
Sbjct: 1623 ----DKHSHAVNTNCIVSSDDESTDKETEHCNGRD 1653



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 63/164 (38%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
 Frame = +2

Query: 554  EMDVIVSSD--------DDDKNVIVSGGHDMSADNNFTVSGGDDNDVPVDKNVIIFGEED 709
            E DV VS D        DD  N IVS   + +       +GG + DV V  +       D
Sbjct: 1654 EADVTVSEDVNKNVNFIDDVTNCIVSSDDESTDKETKHCNGGAEEDVTVSDDEYFDAPWD 1713

Query: 710  ENV---SKDKHRHVVGEDVIVSGEDGMAAN--------------KNVLVSGGDHENRSRR 838
             N+    KDKH H V ++  VS +D + AN              KNV+VSG D ENR  R
Sbjct: 1714 NNLIGPGKDKHSHAVNKNSTVSSDDALTANQNYAVSFGGDIPADKNVIVSGED-ENRFHR 1772

Query: 839  LFILP-SIVKAVLTSRPFWIGLGGILVWITCRHFKKRRSRNPIT 967
            LF  P S+V+AVL SR FW+GL  IL    C H     +RNP T
Sbjct: 1773 LFTKPLSLVRAVLISRHFWLGLVAIL---CCVHVYV-GARNPST 1812


Top