BLASTX nr result

ID: Glycyrrhiza24_contig00006989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006989
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532219.1| PREDICTED: cell division control protein 6 h...   240   1e-61
ref|XP_003552968.1| PREDICTED: cell division control protein 6 h...   233   2e-59
ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|2235350...   176   1e-42
ref|XP_004143214.1| PREDICTED: cell division control protein 6 h...   174   7e-42

>ref|XP_003532219.1| PREDICTED: cell division control protein 6 homolog [Glycine max]
          Length = 458

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/144 (79%), Positives = 125/144 (86%)
 Frame = +1

Query: 1   RKSPRRCTASTPNSIPTGNKFGTDENQTESRESATAKPRWNPKDGEQLRAVKEVLHLSTA 180
           RKSPRRCTA+TPNS PT N+FG DEN+ +       KP+WNPKDGEQL+ VK  LHLSTA
Sbjct: 19  RKSPRRCTAATPNSTPTMNRFGADENRADPE---AVKPKWNPKDGEQLKRVKLALHLSTA 75

Query: 181 PSTIVCREEEQNVVLEFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVLLLNWATEAGL 360
           PS++VCREEEQNVVLEFCKGCVEH+KAGSLYICGCPGTGKSLSMEKVK  LLNWA EAGL
Sbjct: 76  PSSVVCREEEQNVVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLNWAKEAGL 135

Query: 361 PRPDVLSVNCTSLVNTSDIFTKIL 432
           P+PDVLSVNCT+  NTSDIFTKIL
Sbjct: 136 PQPDVLSVNCTTFTNTSDIFTKIL 159


>ref|XP_003552968.1| PREDICTED: cell division control protein 6 homolog [Glycine max]
          Length = 449

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/145 (77%), Positives = 123/145 (84%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1   RKSPRRCTASTPNSIPTGNKFG-TDENQTESRESATAKPRWNPKDGEQLRAVKEVLHLST 177
           RKSPRRCTA+TPNS PT N+ G  DENQ +    A  KP+WNPKDGEQL+  K  LHLST
Sbjct: 19  RKSPRRCTAATPNSTPTKNRLGGADENQADP---AAVKPKWNPKDGEQLKRAKMALHLST 75

Query: 178 APSTIVCREEEQNVVLEFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVLLLNWATEAG 357
           APS++VCREEEQN+VLEFCKGCVEH+KAGSLYICGCPGTGKSLSMEKVK  LLNWA E G
Sbjct: 76  APSSVVCREEEQNMVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLNWAKEEG 135

Query: 358 LPRPDVLSVNCTSLVNTSDIFTKIL 432
           LP PDVLSVNCT+L NTSDIFTKIL
Sbjct: 136 LPLPDVLSVNCTTLTNTSDIFTKIL 160


>ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/148 (58%), Positives = 107/148 (72%), Gaps = 4/148 (2%)
 Frame = +1

Query: 1   RKSPRRCTASTPNSIPTG----NKFGTDENQTESRESATAKPRWNPKDGEQLRAVKEVLH 168
           RKSPRRC  S+PN+   G     K      + E   + + KP WNP+D +Q+  VKEVLH
Sbjct: 52  RKSPRRCVDSSPNTPTNGIEKLEKKCKSPVKKELSNNLSEKPNWNPRDVKQVSVVKEVLH 111

Query: 169 LSTAPSTIVCREEEQNVVLEFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVLLLNWAT 348
           +STAPS+ VCRE+EQ  V +FCK C+E EKAGSLY+CGCPGTGKSLSMEKVK  L++WA 
Sbjct: 112 VSTAPSSAVCREDEQKRVFDFCKACIEQEKAGSLYVCGCPGTGKSLSMEKVKQCLVDWAK 171

Query: 349 EAGLPRPDVLSVNCTSLVNTSDIFTKIL 432
           EAG   PDVL++NCTSL  TS+IF K++
Sbjct: 172 EAGFQPPDVLTMNCTSLTKTSEIFKKVM 199


>ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|223535057|gb|EEF36739.1| cdc6,
           putative [Ricinus communis]
          Length = 523

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/144 (59%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +1

Query: 4   KSPRRCTASTPNSIP-TGNKFGTDENQTESRESATAKPRWNPKDGEQLRAVKEVLHLSTA 180
           KSPRRC  S+PN+ P  G +        +  +    K  WNP+D EQ+ AVKE LH+STA
Sbjct: 47  KSPRRCFVSSPNTTPDVGIEKMCKSPAKKLCDDLIDKANWNPRDMEQMSAVKEALHVSTA 106

Query: 181 PSTIVCREEEQNVVLEFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVLLLNWATEAGL 360
           PST+VCRE+EQ  V +FCK C+E EKAGSLY+CGCPGTGKSLSM KVK  L++W  EAG 
Sbjct: 107 PSTVVCREDEQKKVFDFCKACIEQEKAGSLYVCGCPGTGKSLSMAKVKQQLVDWTKEAGF 166

Query: 361 PRPDVLSVNCTSLVNTSDIFTKIL 432
             PDVLS+NCTSL NT +IF+KI+
Sbjct: 167 QCPDVLSMNCTSLTNTCEIFSKII 190


>ref|XP_004143214.1| PREDICTED: cell division control protein 6 homolog [Cucumis
           sativus] gi|449520665|ref|XP_004167354.1| PREDICTED:
           cell division control protein 6 homolog [Cucumis
           sativus]
          Length = 500

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/144 (58%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +1

Query: 4   KSPRRCTASTPNSIPTGNKFGTDENQTESR-ESATAKPRWNPKDGEQLRAVKEVLHLSTA 180
           KSPRRC  S+P + P  +   + +N  +   +    KP WNPKD E ++  KE LH+STA
Sbjct: 44  KSPRRCLNSSPKTPPEVSLLRSFQNSLQCLLKELIVKPDWNPKDIEHVKTAKEALHISTA 103

Query: 181 PSTIVCREEEQNVVLEFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVLLLNWATEAGL 360
           P+TI+CRE+EQ+ +  FCK  VE EKAGSLY+CGCPGTGKSLSMEKVK  L  WA E+GL
Sbjct: 104 PTTIMCREDEQSKIFNFCKASVEQEKAGSLYVCGCPGTGKSLSMEKVKDQLAAWAEESGL 163

Query: 361 PRPDVLSVNCTSLVNTSDIFTKIL 432
             PD+LS+NCTSL NTS IFTKI+
Sbjct: 164 QLPDILSINCTSLANTSYIFTKIM 187


Top