BLASTX nr result

ID: Glycyrrhiza24_contig00006988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006988
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containin...   539   e-150
ref|XP_003527663.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   521   e-145
gb|AFK47452.1| unknown [Lotus japonicus]                              518   e-144
ref|XP_003589157.1| Zinc finger CCCH domain-containing protein [...   484   e-134
gb|AFK34225.1| unknown [Medicago truncatula]                          478   e-132

>ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Glycine
            max]
          Length = 430

 Score =  539 bits (1388), Expect = e-150
 Identities = 293/432 (67%), Positives = 323/432 (74%), Gaps = 4/432 (0%)
 Frame = -2

Query: 1571 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 1392
            MRRLQ  K+VSWASDLDLCQVRLFLSE+SP QVGLNSQD+LQAKTSL L PGGAGSDDIL
Sbjct: 1    MRRLQTLKQVSWASDLDLCQVRLFLSEESPSQVGLNSQDNLQAKTSLSLRPGGAGSDDIL 60

Query: 1391 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 1212
            PPGFEGTHASSQF+IKPSQIP+I+WI P KIVLN+ W+VV+GEESKE EDQ QRE+RVLE
Sbjct: 61   PPGFEGTHASSQFEIKPSQIPVIKWITPQKIVLNVTWRVVSGEESKEAEDQCQREMRVLE 120

Query: 1211 AXXXXXXXXXXXXXXXXXVEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 1032
            A                 VE+ H ID QT LIPITP+EDEDAA +TLS SL+ F VSQSL
Sbjct: 121  AIYPRISSIPLNPSVSMDVEEFHCIDGQTTLIPITPVEDEDAAAETLSYSLEPFHVSQSL 180

Query: 1031 DFPAGVLKASNSATGMQLAHGL-XXXXXXXXXALTSIVKGSEHGNLIDHGLLNNILNNPE 855
               +GVLK SNSAT MQLA GL          ALT++VK +EHGN +DH LLNNILNNPE
Sbjct: 181  QLASGVLKDSNSATSMQLACGLASDVAVAASVALTNLVKSNEHGNFVDHELLNNILNNPE 240

Query: 854  VIEKLVRDYGVTNNPQHVHNVGSSSVA-SSHPIPINQGETTAPXXXXXXXXXSYTDPTGG 678
            VIEKLV DYG  NN Q+VHN GSS  A S+ PIPI QG+TT P         SYT P GG
Sbjct: 241  VIEKLVGDYGAINNSQYVHNAGSSLAAFSNPPIPI-QGQTTTPSSVVFSTTSSYTPPIGG 299

Query: 677  QVATITNQWHPRP-XXXXXXXXXXXXXSTRDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQ 501
            Q   +T QW PRP                RDVNYYKSLIQQHGG K E LP SS RQI Q
Sbjct: 300  QAEPVTTQWPPRPAVSSAIVSSPIEVPPARDVNYYKSLIQQHGGHK-ETLPYSSKRQIPQ 358

Query: 500  PSTNYETT-HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQS 324
             +TNYETT +N R K SKPKIMKPCIFFNSSRGCRNGANCAYQHD+SF+P+GN VSGIQS
Sbjct: 359  AATNYETTSYNHRGKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVSGIQS 418

Query: 323  SKRMKMDNEISS 288
            SKRMKMD+EIS+
Sbjct: 419  SKRMKMDHEISN 430


>ref|XP_003527663.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 6-like [Glycine max]
          Length = 431

 Score =  521 bits (1343), Expect = e-145
 Identities = 285/432 (65%), Positives = 314/432 (72%), Gaps = 4/432 (0%)
 Frame = -2

Query: 1571 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 1392
            MRRLQ SKRVSWASDLDLCQVRLFLSE+SP QVGLNSQDH+QAKTSLLL P GAGSDDIL
Sbjct: 1    MRRLQKSKRVSWASDLDLCQVRLFLSEESPSQVGLNSQDHVQAKTSLLLHPDGAGSDDIL 60

Query: 1391 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 1212
            PPGFEGTHA SQ +IK SQIP+I+WI PPKI +N  W+V  GEES EVEDQ QRE+RVLE
Sbjct: 61   PPGFEGTHAKSQSEIKLSQIPVIKWITPPKIEVNPTWRVAVGEESTEVEDQPQREMRVLE 120

Query: 1211 AXXXXXXXXXXXXXXXXXVEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 1032
            A                 VE+SH +DDQTALIPITPIE+E+AA   L +SLK FDVSQSL
Sbjct: 121  AIYPRISSIPQNPSVSMDVEESHCMDDQTALIPITPIEEEEAAAKALMDSLKPFDVSQSL 180

Query: 1031 DFPAGVLKASNSATGMQLAHGL-XXXXXXXXXALTSIVKGSEHGNLIDHGLLNNILNNPE 855
                G+LK SNSAT MQLA GL          ALTS+VK +EHGN IDH  +N+ILNNPE
Sbjct: 181  QLAPGILKDSNSATSMQLACGLASDVVAAAFVALTSLVKRNEHGNFIDHESVNHILNNPE 240

Query: 854  VIEKLVRDYGVTNNPQHVHNVGSSSVASSHP-IPINQGETTAPXXXXXXXXXSYTDPTGG 678
            VI KLVRDY   NN Q+VHN GSS  A S+P IPI QGETT P         SY  P GG
Sbjct: 241  VIVKLVRDYRAANNSQYVHNAGSSLAAFSNPSIPI-QGETTTPSSVVFSGTSSYAPPIGG 299

Query: 677  QVATITNQWHPRP-XXXXXXXXXXXXXSTRDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQ 501
             V  IT QW PRP                R+VNYYKSLIQQHGGDKQE LP SS RQI Q
Sbjct: 300  LVEPITTQWPPRPAMSSAIVSSSIEVPPARNVNYYKSLIQQHGGDKQETLPYSSKRQIPQ 359

Query: 500  PSTNYETT-HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQS 324
             +TNYETT +N R K SKPKIMKPCIFFN+S+GCR GANC Y HD+SF P+GN VSGIQS
Sbjct: 360  SATNYETTSYNHRGKVSKPKIMKPCIFFNTSKGCRKGANCDYHHDASFXPRGNTVSGIQS 419

Query: 323  SKRMKMDNEISS 288
            SKR+KMD+EISS
Sbjct: 420  SKRIKMDHEISS 431


>gb|AFK47452.1| unknown [Lotus japonicus]
          Length = 418

 Score =  518 bits (1333), Expect = e-144
 Identities = 276/423 (65%), Positives = 309/423 (73%), Gaps = 2/423 (0%)
 Frame = -2

Query: 1550 KRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDILPPGFEGT 1371
            +RVSWASD +LCQVRLFLS++SP QVGLNSQDHLQAKTSLLL PGGAGSDD LPPGFEGT
Sbjct: 6    RRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPGFEGT 65

Query: 1370 HASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLEAXXXXXX 1191
            HASSQF+I  S+IP+I W  PPKIVLNL WQVVAGEESKEVEDQH+RELRVLEA      
Sbjct: 66   HASSQFEINLSRIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRIS 125

Query: 1190 XXXXXXXXXXXVEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSLDFPAGVL 1011
                       VE+SH+ID Q  LIPITPIED+DA  DT+SN      VSQSL+ P G+L
Sbjct: 126  SIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSN------VSQSLEQPTGIL 179

Query: 1010 KASNSATGMQLAHGLXXXXXXXXXALTSIVKGSEHGNLIDHGLLNNILNNPEVIEKLVRD 831
            K S+SAT M LA GL         ALT+IVK +E GNLIDH LL NIL +PEVIEKLVRD
Sbjct: 180  KVSSSATNMHLAGGLGSDVAAAAAALTNIVKSNERGNLIDHELLKNILRSPEVIEKLVRD 239

Query: 830  YGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXSYTDPTGGQVATITNQ 654
            YGVTNN Q+VHNVG SS A S  PI  NQGE             SY  PTGGQ A+++ Q
Sbjct: 240  YGVTNNSQYVHNVGPSSAAFSRPPIATNQGENA----LLSSVTSSYIHPTGGQAASVSTQ 295

Query: 653  WHPRPXXXXXXXXXXXXXST-RDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQPSTNYETT 477
            W PRP              + +D NYYKSLIQQHGGDKQE  P SS+ QIQQP   YET 
Sbjct: 296  WVPRPVVNSVSVASPVEVPSKKDANYYKSLIQQHGGDKQETFPYSSSNQIQQPVNQYETA 355

Query: 476  HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQSSKRMKMDNE 297
            +N R K  +PKIMKPCIFFNSSRGCRNGANC+YQHD+SF+ +G+ VSGIQSSKRMK+DNE
Sbjct: 356  YNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDASFQQRGSTVSGIQSSKRMKLDNE 415

Query: 296  ISS 288
            ISS
Sbjct: 416  ISS 418


>ref|XP_003589157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355478205|gb|AES59408.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 412

 Score =  484 bits (1246), Expect = e-134
 Identities = 273/433 (63%), Positives = 300/433 (69%), Gaps = 5/433 (1%)
 Frame = -2

Query: 1571 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 1392
            MR L+ SKRVSW S+LDLCQVRLFLSE+SP QVGLNSQDHLQ K S LLP G AGSDDIL
Sbjct: 1    MRGLRKSKRVSWPSELDLCQVRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDIL 60

Query: 1391 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 1212
            PPGFEGTH SSQFDIK S IP+I WI PPKIVL+L WQVVAGEESKE+ DQHQRE+RVLE
Sbjct: 61   PPGFEGTHTSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLE 120

Query: 1211 AXXXXXXXXXXXXXXXXXVEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 1032
            A                 V+DSHYID    +IPITP+ED D   DTLS            
Sbjct: 121  A-IYPRISSIPPNPISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLS------------ 167

Query: 1031 DFPAGVLKASNSATGMQLAHGLXXXXXXXXXALTSIVKGSEHGNLIDHGLLNNILNNPEV 852
                G+L  SN+ T M +   +         ALTS+VK SEHGNLID  LLNNILNNPEV
Sbjct: 168  ---PGILDGSNTVTTMSMVSDV----AAASVALTSLVKSSEHGNLIDPELLNNILNNPEV 220

Query: 851  IEKLVRDYGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXSYTDPTGGQ 675
            IEKLVR+Y V  N Q+  N GSSS   SH P P NQ ETT           SYT  TGGQ
Sbjct: 221  IEKLVRNYNV-QNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQ 279

Query: 674  VA-TITNQWHPRP-XXXXXXXXXXXXXSTRDVNYYKSLIQQHGGDKQEPLP-SSSNRQIQ 504
            +A T++ QWH RP              ST+DVNYYKSLIQQHGGDKQE LP SSSNRQ Q
Sbjct: 280  MAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQ 339

Query: 503  QPSTNYETTHNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRP-QGNAVSGIQ 327
            QP +NY+T HNFR KGSKPKI KPCIFFNSSRGCRNGANC +QHD+SF+P QGN  SG+ 
Sbjct: 340  QPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMH 399

Query: 326  SSKRMKMDNEISS 288
            SSKRMKMDNEISS
Sbjct: 400  SSKRMKMDNEISS 412


>gb|AFK34225.1| unknown [Medicago truncatula]
          Length = 412

 Score =  478 bits (1229), Expect = e-132
 Identities = 270/433 (62%), Positives = 299/433 (69%), Gaps = 5/433 (1%)
 Frame = -2

Query: 1571 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 1392
            MR L+ SKRVSW S+LDLCQVRLFLS++SP QVGLNSQDHLQ K S LLP G AGSDDIL
Sbjct: 1    MRGLRKSKRVSWPSELDLCQVRLFLSDESPSQVGLNSQDHLQEKISSLLPQGEAGSDDIL 60

Query: 1391 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 1212
            PPGFEGTH SSQFDIK S IP+I WI PPKIVL+L WQVVAGEESKE+ DQHQRE+RVLE
Sbjct: 61   PPGFEGTHTSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLE 120

Query: 1211 AXXXXXXXXXXXXXXXXXVEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 1032
            A                 V+DSHYID    +IPIT +ED D   DTLS            
Sbjct: 121  A-IYPRISSIPPNPISVDVDDSHYIDGHIVVIPITLVEDGDVGADTLS------------ 167

Query: 1031 DFPAGVLKASNSATGMQLAHGLXXXXXXXXXALTSIVKGSEHGNLIDHGLLNNILNNPEV 852
                G+L  SN+ T M +   +         ALTS+VK SEHGNLID  LLNNILNNPEV
Sbjct: 168  ---PGILDGSNTVTTMSMVSDV----AAASVALTSLVKSSEHGNLIDPELLNNILNNPEV 220

Query: 851  IEKLVRDYGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXSYTDPTGGQ 675
            IEKLVR+Y V  N Q+  N GSSS   SH P P N+ ETT           SYT  TGGQ
Sbjct: 221  IEKLVRNYNV-QNAQYAQNTGSSSNVFSHPPNPFNRVETTTSSSNAFSSTSSYTHTTGGQ 279

Query: 674  VA-TITNQWHPRP-XXXXXXXXXXXXXSTRDVNYYKSLIQQHGGDKQEPLP-SSSNRQIQ 504
            +A T++ QWH RP              ST+DVNYYKSLIQQHGGDKQE LP SSSNRQ Q
Sbjct: 280  MAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQ 339

Query: 503  QPSTNYETTHNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRP-QGNAVSGIQ 327
            QP +NY+T HNFR KGSKPKI KPCIFFNSSRGCRNGANC +QHD+SF+P QGN  SG+ 
Sbjct: 340  QPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMH 399

Query: 326  SSKRMKMDNEISS 288
            SSKRMKMDNEISS
Sbjct: 400  SSKRMKMDNEISS 412


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