BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006938
         (1935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   708   0.0  
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ...   673   0.0  
ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   659   0.0  
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   634   e-179
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   625   e-176

>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355520709|gb|AET01163.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  708 bits (1828), Expect = 0.0
 Identities = 363/473 (76%), Positives = 401/473 (84%), Gaps = 10/473 (2%)
 Frame = -3

Query: 1867 MGKIPPSFRSAISNPNLINPSSVL--PSPKPHHFPKKIPSHFPGKSRKPXXXXXXQE--- 1703
            MGKIPPSFRSA+SNPNLI+ SS L   SPKPHHFP K        +RKP       +   
Sbjct: 1    MGKIPPSFRSALSNPNLIHRSSSLIPSSPKPHHFPNK--------TRKPHQKQQQSQSQS 52

Query: 1702 --PKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAFLRH 1529
              PKPV+VFKSP+LQ+AKSIFNS VN SNAPID +RFHNSLLQSYASIST NDSIAFLRH
Sbjct: 53   QSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPID-SRFHNSLLQSYASISTINDSIAFLRH 111

Query: 1528 MTKTLPSFSPDRSTYHILLSHSCKSPDS---TLSPLHQTLNLMVSDGISPDKVTVDLAVR 1358
            MTKT PSFSPD+STYHILL+H CKS DS   TLS +HQTLNLMVSDGISPDK TVDLAVR
Sbjct: 112  MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVR 171

Query: 1357 ALCLAGRLDHAVELIRELSSKHCSPDAYTFNFLVKHLCKCRALSSVYGFIDEMRSNFGLK 1178
            +LC A R+D AVELI+ELSSKHCSPD Y++NFLVK+LCK R LS VY FIDEMR+ F +K
Sbjct: 172  SLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVK 231

Query: 1177 PDLVTYTILIDNVCNTKNLREALRLVSVLHEEGFKPDCFVYNTIMKGYCMLSRGSEAIEV 998
            P+LVTYTILIDNVCNTKNLREA RLV +L EEGFKPDCF+YNTIMKGYCMLSRGSEAIEV
Sbjct: 232  PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 291

Query: 997  YNKMKEEGVEPDLVTYNTLIYGLSKSGRVAEAKKLLRVMAEKGHFPDEVTYTTLMNGLCR 818
            YN+MKE+GVEPDL+TYNTLI+GLSKSGRV+EAKKLLRVMAEKGHFPDEVTYT+LMNG+CR
Sbjct: 292  YNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCR 351

Query: 817  KGXXXXXXXXXXXXEVKGCSPNSCTYNTLLHGLCKSRMLDKAVELYGVMKLGGLKLETAS 638
            KG            E+KGCSPN+CTYNTLLHGLCKSRM DKA+ELYG MK  GLKL+ AS
Sbjct: 352  KGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMAS 411

Query: 637  YATFVRALCRDGKIAEAYEVFDYAVESKSLTDVAAYSALESTLKWLKKAKEQG 479
            YATFVRALC  G++A+AYEVFDYAVESKSL+DVAAYS LESTLKW KKAKE+G
Sbjct: 412  YATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAKEEG 464


>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484989|gb|AES66192.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  673 bits (1736), Expect = 0.0
 Identities = 350/473 (73%), Positives = 389/473 (82%), Gaps = 10/473 (2%)
 Frame = -3

Query: 1870 EMGKIPPSFRSAISNPNLINPSSVL--PSPKPHHFPKKIPSHFPGKSRKPXXXXXXQE-- 1703
            + GKIPPSFRSA+SNPNLI+ SS L   SPKPHHFP K        +RKP       +  
Sbjct: 16   QYGKIPPSFRSALSNPNLIHRSSSLIPSSPKPHHFPNK--------TRKPHQKQQQSQSQ 67

Query: 1702 ---PKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAFLR 1532
               PKPV+VFKSP+LQ+AKSIFNS VN SNAPID +RFHNSLLQSYASIST NDSIAFLR
Sbjct: 68   SQSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPID-SRFHNSLLQSYASISTINDSIAFLR 126

Query: 1531 HMTKTLPSFSPDRSTYHILLSHSCKSPDS---TLSPLHQTLNLMVSDGISPDKVTVDLAV 1361
            HMTKT PSFSPD+STYHILL+H CKS DS   TLS +HQTLNLMVSDGISPDK TVDLAV
Sbjct: 127  HMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAV 186

Query: 1360 RALCLAGRLDHAVELIRELSSKHCSPDAYTFNFLVKHLCKCRALSSVYGFIDEMRSNFGL 1181
            R+LC A R+D AVELI+ELSSKHCSPD Y++NFLVK+LCK R LS VY            
Sbjct: 187  RSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVY------------ 234

Query: 1180 KPDLVTYTILIDNVCNTKNLREALRLVSVLHEEGFKPDCFVYNTIMKGYCMLSRGSEAIE 1001
             P+LVTYTILIDNVCNTKNLREA RLV +L EEGFKPDCF+YNTIMKGYCMLSRGSEAIE
Sbjct: 235  -PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE 293

Query: 1000 VYNKMKEEGVEPDLVTYNTLIYGLSKSGRVAEAKKLLRVMAEKGHFPDEVTYTTLMNGLC 821
            VYN+MKE+GVEPDL+TYNTLI+GLSKSGRV+EAKKLLRVMAEKGHFPDEVTYT+LMNG+C
Sbjct: 294  VYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMC 353

Query: 820  RKGXXXXXXXXXXXXEVKGCSPNSCTYNTLLHGLCKSRMLDKAVELYGVMKLGGLKLETA 641
            RKG            E+KGCSPN+CTYNTLLHGLCKSRM DKA+ELYG MK  GLKL+ A
Sbjct: 354  RKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMA 413

Query: 640  SYATFVRALCRDGKIAEAYEVFDYAVESKSLTDVAAYSALESTLKWLKKAKEQ 482
            SYATFVRALC  G++A+AYEVFDYAVESKSL+DVAAYS LESTLKW +K K++
Sbjct: 414  SYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWSRKQKKK 466


>ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g17670-like [Glycine max]
          Length = 456

 Score =  659 bits (1700), Expect = 0.0
 Identities = 338/469 (72%), Positives = 386/469 (82%), Gaps = 3/469 (0%)
 Frame = -3

Query: 1867 MGKIPPSFRSAISNPNLINPSSVLPSPKPHHFPKKIPSHFPGKSRKPXXXXXXQEPKPVA 1688
            MGKIPPSFRSAI+NPNL NPSS+   P+PHHFP K       + RKP       +P  + 
Sbjct: 1    MGKIPPSFRSAIANPNLRNPSSLF-RPQPHHFPNKHQ-----QPRKPSKQQQ--KPSSLP 52

Query: 1687 VFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTT-NDSIAFLRHMTKTLP 1511
            +FKSP+L+DAK +FNSI N S+ P    RF NSLL SYA ++TT +DSI F  H+TKTLP
Sbjct: 53   LFKSPNLEDAKKLFNSIANSSSDP----RFPNSLLHSYAKLATTPSDSIKFFNHITKTLP 108

Query: 1510 SFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDGISPDKVTVDLAVRALCLAGRLD 1331
            SFSPDRST+HILLSH+  +  + LSP+HQ LNLM++ GI+PD  T D+AVR+LC AGRLD
Sbjct: 109  SFSPDRSTFHILLSHASNN-SNLLSPIHQXLNLMLAAGITPDTATADVAVRSLCSAGRLD 167

Query: 1330 HAVELIRELSSKHCSPDAYTFNFLVKHLCKCRALSSVYGFIDEMRSNFGLKPDLVTYTIL 1151
            HAVELI+E +SKHC PD YTFNFLVKHLCK   +++VY FIDEMR  F +KPDLVTYTIL
Sbjct: 168  HAVELIKEFASKHCPPDTYTFNFLVKHLCKSSTITTVYAFIDEMREKFDVKPDLVTYTIL 227

Query: 1150 IDNVCNTKNL--REALRLVSVLHEEGFKPDCFVYNTIMKGYCMLSRGSEAIEVYNKMKEE 977
            IDNVCN KNL  REA+RLVSVLHEEGFK DCFVYNTIMKGYC+LSRGSEAIEVYNKMKEE
Sbjct: 228  IDNVCNGKNLNLREAMRLVSVLHEEGFKLDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEE 287

Query: 976  GVEPDLVTYNTLIYGLSKSGRVAEAKKLLRVMAEKGHFPDEVTYTTLMNGLCRKGXXXXX 797
            GVEPDLVTYNTLI+GLSKSGRV EA+KLLRVMAEKG+FPDEVTYT+LMNGLCRKG     
Sbjct: 288  GVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGA 347

Query: 796  XXXXXXXEVKGCSPNSCTYNTLLHGLCKSRMLDKAVELYGVMKLGGLKLETASYATFVRA 617
                   E KGCSPN+CTYNTLLHGLCK+R+++KAV+ Y V++ GGLKL+TASY TFVRA
Sbjct: 348  LALLGEMEAKGCSPNACTYNTLLHGLCKARLVEKAVKFYQVIRAGGLKLDTASYGTFVRA 407

Query: 616  LCRDGKIAEAYEVFDYAVESKSLTDVAAYSALESTLKWLKKAKEQGHAI 470
            LCRDG+IAEAYEVFDYAVESKSLTDVAAYS LESTLKWL+KAKEQG AI
Sbjct: 408  LCRDGRIAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLRKAKEQGLAI 456


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  634 bits (1634), Expect = e-179
 Identities = 318/475 (66%), Positives = 378/475 (79%), Gaps = 10/475 (2%)
 Frame = -3

Query: 1867 MGKIPPSFRSA-------ISNPNLINP--SSVLPSP-KPHHFPKKIPSHFPGKSRKPXXX 1718
            MGKIPPSFR++       + NP  + P  S+VL +P KPHHFPKK P    GK++K    
Sbjct: 1    MGKIPPSFRTSTVPVTTLLKNPPAVLPKQSTVLETPQKPHHFPKKRPQP-SGKTKKTRTP 59

Query: 1717 XXXQEPKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAF 1538
                +PK   +F SP+L DAK +F SI   S  P+D  RFHN+LLQSY+SIST NDSI+F
Sbjct: 60   IE--DPKSPVIFNSPNLLDAKKLFASITTTSTTPLD-LRFHNALLQSYSSISTVNDSISF 116

Query: 1537 LRHMTKTLPSFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDGISPDKVTVDLAVR 1358
            LRHM K+ PSFSP+RSTYHILLS SCKSP+S LS +HQTLNLMV+ G  PD+VT D+AVR
Sbjct: 117  LRHMIKSQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVR 176

Query: 1357 ALCLAGRLDHAVELIRELSSKHCSPDAYTFNFLVKHLCKCRALSSVYGFIDEMRSNFGLK 1178
            +LC AGR +HA+EL++ELS KH  PD++T+NF+++HLCK RALS+VY FIDE++++F LK
Sbjct: 177  SLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLK 236

Query: 1177 PDLVTYTILIDNVCNTKNLREALRLVSVLHEEGFKPDCFVYNTIMKGYCMLSRGSEAIEV 998
            PDLVTYTILIDNVCN KNLREA RL+ VL E GFKPDC+VYNTIMKGYC+L +GSEAI V
Sbjct: 237  PDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGV 296

Query: 997  YNKMKEEGVEPDLVTYNTLIYGLSKSGRVAEAKKLLRVMAEKGHFPDEVTYTTLMNGLCR 818
            Y KMKEEGVEPDLVTYNTLI+GLSKSGRV EA+K L +MAE GHFPD VTYT+LMNGLCR
Sbjct: 297  YKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCR 356

Query: 817  KGXXXXXXXXXXXXEVKGCSPNSCTYNTLLHGLCKSRMLDKAVELYGVMKLGGLKLETAS 638
            +G            E KGCSPNSCTYNTLLHGLCK RML++ +ELYGVMK GG+KLE AS
Sbjct: 357  EGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKAS 416

Query: 637  YATFVRALCRDGKIAEAYEVFDYAVESKSLTDVAAYSALESTLKWLKKAKEQGHA 473
            YATFVRALC++G++AEAYE FDY VESKS  DV AYS LE++LKWL+KA+EQG A
Sbjct: 417  YATFVRALCKEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQGLA 471


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  625 bits (1612), Expect = e-176
 Identities = 308/467 (65%), Positives = 374/467 (80%), Gaps = 1/467 (0%)
 Frame = -3

Query: 1867 MGKIPPSFRSAISNPNLINPSSVLPSP-KPHHFPKKIPSHFPGKSRKPXXXXXXQEPKPV 1691
            MGK+PPS RSA+S   L+   +  P P KPH+  KK       K   P         +  
Sbjct: 1    MGKVPPSLRSAVSTTALLRKPNPFPPPEKPHYLSKKTKLQLSQKIPTPI--------QQK 52

Query: 1690 AVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAFLRHMTKTLP 1511
             +FKSP L +AK IFNS+++ +  P+D  RFH+S LQSY+SIST +DSI+ LRHM KTLP
Sbjct: 53   RLFKSPELNEAKEIFNSLISTTRVPLD-LRFHHSFLQSYSSISTIDDSISLLRHMIKTLP 111

Query: 1510 SFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDGISPDKVTVDLAVRALCLAGRLD 1331
            SF+P  STYHILLS SCK+PD TLSP+HQ LNLMV++G  P +VTVD+AVRALC AG+ D
Sbjct: 112  SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171

Query: 1330 HAVELIRELSSKHCSPDAYTFNFLVKHLCKCRALSSVYGFIDEMRSNFGLKPDLVTYTIL 1151
             AV+L++ELS KH  PD++T+NFLVK LCKCRALS+VY FIDEMRS+F L+P+LVTYTIL
Sbjct: 172  DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTIL 231

Query: 1150 IDNVCNTKNLREALRLVSVLHEEGFKPDCFVYNTIMKGYCMLSRGSEAIEVYNKMKEEGV 971
            IDNVCN+KNLREA+RL+ +L E GFKPDCFVYNTIMKGYCMLS+GS+AI+V+ KMKEEG+
Sbjct: 232  IDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGI 291

Query: 970  EPDLVTYNTLIYGLSKSGRVAEAKKLLRVMAEKGHFPDEVTYTTLMNGLCRKGXXXXXXX 791
            EPDL+TYNTLI+GLSK GRV+EAK+ L++M E GHFPD VTYT+LMNGLCRKG       
Sbjct: 292  EPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALA 351

Query: 790  XXXXXEVKGCSPNSCTYNTLLHGLCKSRMLDKAVELYGVMKLGGLKLETASYATFVRALC 611
                 E+KGCSPNSCTYNTLL+GLCK R+L+K +ELY V+K GG+ L+TASYATFVRALC
Sbjct: 352  LLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRALC 411

Query: 610  RDGKIAEAYEVFDYAVESKSLTDVAAYSALESTLKWLKKAKEQGHAI 470
            R+GK+AEAYEVFDYAVESKSLT+ AAY+ LESTLKWLKKA+EQG ++
Sbjct: 412  REGKVAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKAREQGLSV 458