BLASTX nr result

ID: Glycyrrhiza24_contig00006933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006933
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40042.1| unknown [Lotus japonicus]                              128   5e-28
ref|NP_001237878.1| uncharacterized protein LOC100527049 [Glycin...   114   8e-24
ref|XP_003597922.1| hypothetical protein MTR_2g104040 [Medicago ...   108   8e-22
ref|XP_002517662.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002885114.1| hypothetical protein ARALYDRAFT_479046 [Arab...    71   1e-10

>gb|AFK40042.1| unknown [Lotus japonicus]
          Length = 126

 Score =  128 bits (322), Expect = 5e-28
 Identities = 74/110 (67%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +3

Query: 102 NPPNTPLLFLQKYPLPIRFAXXXXXXGWSRVVVPPRALDPKSEDQNSTST-QEGDLVYVG 278
           NPPN+PL FLQ  P+PIRF+       WS V+  PRA DPK+ +QNST+T Q  DLVYV 
Sbjct: 19  NPPNSPL-FLQS-PMPIRFSTTTT--SWSCVI--PRARDPKTGEQNSTNTSQVEDLVYVA 72

Query: 279 KLVVGSFAGAGAIKYGSALFPEITTPNLALALAIILTPVLVAVFLLINES 428
           KL  GSF GAGA+KYGSA+FPEITTPNL LAL+IILTPV+VAV LLI ES
Sbjct: 73  KLAAGSFVGAGAVKYGSAVFPEITTPNLVLALSIILTPVVVAVLLLIKES 122


>ref|NP_001237878.1| uncharacterized protein LOC100527049 [Glycine max]
           gi|255631444|gb|ACU16089.1| unknown [Glycine max]
          Length = 120

 Score =  114 bits (286), Expect = 8e-24
 Identities = 76/113 (67%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
 Frame = +3

Query: 99  VNP--PNTPLLFLQKYPLPIRFAXXXXXXGWSRVVVPPRALDPKSEDQNSTSTQEGDLVY 272
           VNP  PNTPL FLQ  P   RF       G S VV   RA DPK+      S+QE DLVY
Sbjct: 20  VNPAIPNTPL-FLQ-IPKSTRFT------GSSSVVA--RAWDPKT-----ASSQEEDLVY 64

Query: 273 VGKLVVGSFAGAGAIKYGSALFPEITTPNLALALAIILTPVLVAVFLLINESR 431
           VGKLV GSFAG  AIKYGSALFPEITTPNL LAL +ILTPVLVAVFLLI ESR
Sbjct: 65  VGKLVAGSFAGGAAIKYGSALFPEITTPNLVLALLLILTPVLVAVFLLIKESR 117


>ref|XP_003597922.1| hypothetical protein MTR_2g104040 [Medicago truncatula]
           gi|355486970|gb|AES68173.1| hypothetical protein
           MTR_2g104040 [Medicago truncatula]
          Length = 145

 Score =  108 bits (269), Expect = 8e-22
 Identities = 69/142 (48%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = +3

Query: 12  IDMAVWVSEIVG-GDCKFXXXXXXXXXXXXVNPPNTPLLFLQKYPLPIRFAXXXXXXGWS 188
           ++MAV VSEIVG G                V  PNT L+    +P   +         WS
Sbjct: 17  VNMAVSVSEIVGLGSTYGYCNLSRFRRRVNVTSPNTTLISSIIFPTRRK---------WS 67

Query: 189 RVVVPPRALDPKSEDQNSTSTQEGDLVYVGKLVVGSFAGAGAIKYGSALFPEITTPNLAL 368
            VVV       ++++ ++ S+Q+ D+VY+ KLVVGSF GAG IKYGSA+FPEITTPNL L
Sbjct: 68  SVVV-------RAQNSSTYSSQKEDIVYLAKLVVGSFGGAGVIKYGSAIFPEITTPNLVL 120

Query: 369 ALAIILTPVLVAVFLLINESRR 434
           AL II TPVLVAV LLIN+S R
Sbjct: 121 ALVIISTPVLVAVLLLINQSLR 142


>ref|XP_002517662.1| conserved hypothetical protein [Ricinus communis]
           gi|223543294|gb|EEF44826.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = +3

Query: 261 DLVYVGKLVVGSFAGAGAIKYGSALFPEITTPNLALALAIILTPVLVAVFLLINESRRTK 440
           DL ++ KL  GS AGA  IKYGS LFPEIT PN+ LALAI+LTPV +A+ LLI +SRR K
Sbjct: 17  DLSFLWKLGAGSVAGAAIIKYGSILFPEITRPNILLALAIVLTPVFLAIVLLIKQSRRLK 76


>ref|XP_002885114.1| hypothetical protein ARALYDRAFT_479046 [Arabidopsis lyrata subsp.
           lyrata] gi|297330954|gb|EFH61373.1| hypothetical protein
           ARALYDRAFT_479046 [Arabidopsis lyrata subsp. lyrata]
          Length = 140

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/77 (49%), Positives = 51/77 (66%)
 Frame = +3

Query: 210 ALDPKSEDQNSTSTQEGDLVYVGKLVVGSFAGAGAIKYGSALFPEITTPNLALALAIILT 389
           A + +SE  ++    + DL Y+ K+ VGS AGA  IKYGS LFP+IT PNL LAL II+ 
Sbjct: 61  ASNDRSEQADNGQGVQEDLNYLLKIGVGSVAGAAIIKYGSVLFPQITRPNLTLALFIIMA 120

Query: 390 PVLVAVFLLINESRRTK 440
           PV+++V LL   S  +K
Sbjct: 121 PVVISVILLFLSSSSSK 137


Top