BLASTX nr result

ID: Glycyrrhiza24_contig00006896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006896
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi...   418   e-114
ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   418   e-114
ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   397   e-108
ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   360   6e-97
ref|XP_003591073.1| RING finger family protein [Medicago truncat...   358   2e-96

>ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi|87240525|gb|ABD32383.1|
            Zinc finger, RING-type [Medicago truncatula]
            gi|355501330|gb|AES82533.1| RING finger protein [Medicago
            truncatula]
          Length = 361

 Score =  418 bits (1075), Expect = e-114
 Identities = 230/376 (61%), Positives = 258/376 (68%), Gaps = 4/376 (1%)
 Frame = +1

Query: 157  MKNDPTNAQXXXXXXXXXXXXXAGKAQAQNQTNETDPNLNQ-FNPSXXXXXXXXXXXXXX 333
            MK DPTN                 +A   N TN   PN NQ FNPS              
Sbjct: 1    MKKDPTNLFILFGILLLSITKTQSQATNDNPTN---PNFNQEFNPSFAIIIVILVAALFL 57

Query: 334  MGFFSIYIRQCADTPPPNSVL-PVTDGRSRRAARGLDPAVIDSFPILEYSEVKIHKIGKE 510
            MGFFSIYIR+C+D+P  N++L P+T+GR R  ARGLDP+VI++FPILEYSEVKIHKIGK+
Sbjct: 58   MGFFSIYIRRCSDSPSSNNLLLPITNGR-RAVARGLDPSVIETFPILEYSEVKIHKIGKD 116

Query: 511  VLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGV 690
            VLECAVCL EFEDTETLRLIPKCDHVFHPECIDEWL SHTTCPVCRANLVPQPG+SVHGV
Sbjct: 117  VLECAVCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGDSVHGV 176

Query: 691  PVQQNPDSPDLEEAQNDAVESQTATEQQNADADRVLPVPEVVPLDKVLNXXXXXXXXXXX 870
            P  Q  D     EAQNDAV+  T       ++D VL  PEV+ L+K LN           
Sbjct: 177  PESQQQD----VEAQNDAVQLPT-------ESDSVLLAPEVISLNKTLNRNRTRGSQSNR 225

Query: 871  XXXXXXXXXTGHSLVQPGENTDRFTLRLPVGVRKQILNRQLQRASSLIILPRESSSRQGY 1050
                     TGHSL+QPGENTDRFTL+LP  VRKQI++RQLQRA SLI LPRESSSR GY
Sbjct: 226  PRRFPRSHSTGHSLIQPGENTDRFTLKLPNKVRKQIMSRQLQRARSLITLPRESSSRHGY 285

Query: 1051 RTGGDGSSRGKIXXXXXXXXXXXXWVFTMAPPFLVRASSIRSPRPKVNNS-DDEGTSS-S 1224
            RTGG+GS+RGK             W+F  AP FL RA S RSP+PKVNNS DDEGTSS +
Sbjct: 286  RTGGEGSNRGKSLRRLDLSFKSDRWIFNRAPSFLARALSFRSPKPKVNNSDDDEGTSSAA 345

Query: 1225 APIMPSSAVDSARPQV 1272
            APIMPSSAVDSARPQ+
Sbjct: 346  APIMPSSAVDSARPQI 361


>ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 375

 Score =  418 bits (1074), Expect = e-114
 Identities = 230/359 (64%), Positives = 256/359 (71%), Gaps = 12/359 (3%)
 Frame = +1

Query: 232  AQAQNQTNE-TDPNLNQFNPSXXXXXXXXXXXXXXMGFFSIYIRQCADTPPPNSVLPVTD 408
            AQAQ+Q N+ +D NLNQF+PS              M FFSIY+R CAD+P   +V P+T 
Sbjct: 23   AQAQSQPNDFSDANLNQFSPSIAIIIVILVAALFLMAFFSIYVRHCADSPS-TTVSPLTT 81

Query: 409  GRSRRAARGLDPAVIDSFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHV 588
             RSRRAARGLDPAVI +FPILEYSEVKIHKIGKE LECAVCLCEFEDTETLRLIPKCDHV
Sbjct: 82   ARSRRAARGLDPAVIQTFPILEYSEVKIHKIGKEALECAVCLCEFEDTETLRLIPKCDHV 141

Query: 589  FHPECIDEWLGSHTTCPVCRANLVPQPGE------SVHGVPVQQNPDSPDLEEAQNDAVE 750
            FHPECIDEWLGSHTTCPVCRANLVP   E      + +GV       + D+ EAQNDAVE
Sbjct: 142  FHPECIDEWLGSHTTCPVCRANLVPTDSEDAIANGNANGVVPVPETFTRDI-EAQNDAVE 200

Query: 751  SQTATEQQNADADRVLPVPEVVPLDKVLNXXXXXXXXXXXXXXXXXXXXTGHSLVQPGEN 930
            +  A EQQNA+AD VLP PEVV LDK LN                    TGHSLVQPGEN
Sbjct: 201  A--APEQQNAEADPVLPEPEVVSLDKTLNRNRTRGSRSNRPRRFPRSHSTGHSLVQPGEN 258

Query: 931  TDRFTLRLPVGVRKQILNRQLQRASSLIILPRESSSRQGYRTGGDGSSRGKIXXXXXXXX 1110
            TDRFTLRLP+ VRKQ++NRQLQRASSLI+LPRE S RQGYRTGG+GSSRGKI        
Sbjct: 259  TDRFTLRLPLEVRKQLINRQLQRASSLIVLPREGSLRQGYRTGGEGSSRGKISRRLDRSL 318

Query: 1111 XXXXWVFTMAPPFLVRASSIRSPRPKVNNSDDEGT-----SSSAPIMPSSAVDSARPQV 1272
                W+F+MA PF  RA SIRSPR  V N+D EGT     SS+API+P +AVDSARP V
Sbjct: 319  KSDRWIFSMAAPFFARALSIRSPR--VRNNDVEGTASSSSSSTAPILPPTAVDSARPLV 375


>ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 366

 Score =  397 bits (1021), Expect = e-108
 Identities = 215/348 (61%), Positives = 243/348 (69%), Gaps = 10/348 (2%)
 Frame = +1

Query: 259  TDPNLNQFNPSXXXXXXXXXXXXXXMGFFSIYIRQCADTPPPNSVLPVTDGRSRRAARGL 438
            +D NLN+FN S              M FFSIY+R CAD+P  N+V P+T  RSRRAARGL
Sbjct: 25   SDANLNEFNSSVAIIIIILVVAFFLMAFFSIYVRHCADSPS-NTVRPLTTARSRRAARGL 83

Query: 439  DPAVIDSFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWL 618
            DPA+I +FPILEYS VKIHKIGKE LECAVCLCEFEDTETLRL+PKCDHVFHPECIDEWL
Sbjct: 84   DPALIQTFPILEYSVVKIHKIGKEALECAVCLCEFEDTETLRLLPKCDHVFHPECIDEWL 143

Query: 619  GSHTTCPVCRANLVPQPGE------SVHGVPVQQNPDSPDLEEAQNDAVESQTATEQQNA 780
             SHTTCPVCRANL+P   E      + +GV       + D+ E+QNDAV  Q A EQQNA
Sbjct: 144  SSHTTCPVCRANLLPTESEDAIANANANGVVPVPETLTRDI-ESQNDAV--QAAPEQQNA 200

Query: 781  DADRVLPVPEVVPLDKVLNXXXXXXXXXXXXXXXXXXXXTGHSLVQPGENTDRFTLRLPV 960
            +AD VLP PEVV LDK LN                    TGHSLVQPGENTDRFTL+LP+
Sbjct: 201  EADPVLPEPEVVSLDKTLNRNRTRGSRSNRPRRFPRSHSTGHSLVQPGENTDRFTLKLPL 260

Query: 961  GVRKQILNRQLQRASSLIILPRESSSRQGYRTGGDGSSRGKIXXXXXXXXXXXXWVFTMA 1140
             VRKQ++NRQLQRASSLI+LPRE SSRQGYRTGG+GSSRGKI            W+F+M 
Sbjct: 261  EVRKQLINRQLQRASSLIVLPREGSSRQGYRTGGEGSSRGKISRRLDRSLKSDRWIFSMT 320

Query: 1141 PPFLVRASSIRSPRPKVNNSDDEGTSS----SAPIMPSSAVDSARPQV 1272
             PF  RA SIRSPR  V N+D EG +S    + PIMP +AVDSARP V
Sbjct: 321  APFFARALSIRSPR--VRNNDVEGAASPSSPTTPIMPPTAVDSARPPV 366


>ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 359

 Score =  360 bits (924), Expect = 6e-97
 Identities = 201/346 (58%), Positives = 231/346 (66%), Gaps = 4/346 (1%)
 Frame = +1

Query: 232  AQAQNQTNETDPNLNQFNPSXXXXXXXXXXXXXXMGFFSIYIRQCADTPPPN-SVLPVTD 408
            A AQ  TN+     N+F+PS              MGFFSIYIR C+D+P  +   L    
Sbjct: 20   AAAQPATNQNQSYYNKFSPSMAIIIVILIAALFLMGFFSIYIRHCSDSPSASIRNLAAAT 79

Query: 409  GRSRRAARGLDPAVIDSFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHV 588
            GRSRR  RGL+ AVID+FP LEYS VKIHK+GK  LECAVCL EFEDTETLRLIPKCDHV
Sbjct: 80   GRSRRGTRGLEQAVIDTFPTLEYSAVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHV 139

Query: 589  FHPECIDEWLGSHTTCPVCRANLVPQPGESVHGVPVQQNPDSPDLE-EAQNDAVESQTAT 765
            FHPECIDEWL SHTTCPVCRANLVPQPGESVHG+P+   P+  + + EAQND VE     
Sbjct: 140  FHPECIDEWLASHTTCPVCRANLVPQPGESVHGIPILNAPEDIEAQHEAQNDLVE----P 195

Query: 766  EQQNADADRVLPV-PEVVPLDKVLNXXXXXXXXXXXXXXXXXXXXTGHSLVQPGENTDRF 942
            EQQ  D    +P  P+V+ L++ LN                    TGHSLV PGE+T+RF
Sbjct: 196  EQQQQDPKPPVPTEPQVLSLNQTLNRNRTRGSRSGRPRRFPRSHSTGHSLVLPGEDTERF 255

Query: 943  TLRLPVGVRKQIL-NRQLQRASSLIILPRESSSRQGYRTGGDGSSRGKIXXXXXXXXXXX 1119
            TLRLP  VRKQIL N QL RA SL+ILPRE SSR+GYRT G+GSSRG+            
Sbjct: 256  TLRLPEEVRKQILQNPQLHRARSLVILPREGSSRRGYRT-GEGSSRGRSSRRLDRGFKSD 314

Query: 1120 XWVFTMAPPFLVRASSIRSPRPKVNNSDDEGTSSSAPIMPSSAVDS 1257
             WVFTMAPPFLVRASSIRSPR  V N+  EGTS++A + P  AV+S
Sbjct: 315  RWVFTMAPPFLVRASSIRSPR--VANNGGEGTSAAASLPPPPAVES 358


>ref|XP_003591073.1| RING finger family protein [Medicago truncatula]
            gi|355480121|gb|AES61324.1| RING finger family protein
            [Medicago truncatula] gi|388512099|gb|AFK44111.1| unknown
            [Medicago truncatula]
          Length = 373

 Score =  358 bits (920), Expect = 2e-96
 Identities = 210/354 (59%), Positives = 242/354 (68%), Gaps = 7/354 (1%)
 Frame = +1

Query: 232  AQAQNQTNETDPNLNQFNPSXXXXXXXXXXXXXXMGFFSIYIRQCADTPPPNSVLPVTDG 411
            AQ  + TN+     N+ +PS              MGFFSIYIR+C D+P  NS+  +  G
Sbjct: 30   AQTNDNTNDNS-YYNRVSPSMAIIIVILVAALFLMGFFSIYIRRCGDSPS-NSIRNMAGG 87

Query: 412  ---RSRRAARGLDPAVIDSFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCD 582
               RSRRAARGLD +VI +FPI EYS VKIHKIGK  LECAVCL EFE++ETLRLIPKCD
Sbjct: 88   LAGRSRRAARGLDASVIATFPIFEYSTVKIHKIGKGALECAVCLNEFEESETLRLIPKCD 147

Query: 583  HVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGVPVQQNPDSPDLEEAQNDAVESQTA 762
            HVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHG+P   N +  D+ EAQNDAVES   
Sbjct: 148  HVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIP-SINTEPQDI-EAQNDAVES--V 203

Query: 763  TEQQNADAD-RVLPV-PEVVPLDKVLNXXXXXXXXXXXXXXXXXXXXTGHSLVQPGENTD 936
             E QNAD   +V P  PEV+ + + LN                    TGHSLVQPGENT+
Sbjct: 204  HEHQNADGSVKVDPTEPEVLTVSQTLNRNRTRGSQSGRPRWFQRSHSTGHSLVQPGENTE 263

Query: 937  RFTLRLPVGVRKQIL-NRQLQRASSLIILPRESSSRQGYRT-GGDGSSRGKIXXXXXXXX 1110
            RFTLRLPV VRKQIL N +L RA SL++LPRE+SSR+GYRT GG+GSSRGK         
Sbjct: 264  RFTLRLPVEVRKQILQNPELHRARSLVVLPRETSSRRGYRTGGGEGSSRGKSVRRLDRGL 323

Query: 1111 XXXXWVFTMAPPFLVRASSIRSPRPKVNNSDDEGTSSSAPIMPSSAVDSARPQV 1272
                WVFTMAPPFLVRASS+RSPR  V +S  EGTS+SA    ++ V+S RP V
Sbjct: 324  LSDRWVFTMAPPFLVRASSMRSPR--VASSAGEGTSASA--ATAAVVESPRPPV 373


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