BLASTX nr result

ID: Glycyrrhiza24_contig00006895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006895
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603622.1| hypothetical protein MTR_3g109720 [Medicago ...    66   3e-18
gb|AFK49393.1| unknown [Lotus japonicus]                               62   1e-17
ref|XP_002309540.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-09
gb|ABK94391.1| unknown [Populus trichocarpa]                           53   3e-09
ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249...    57   3e-06

>ref|XP_003603622.1| hypothetical protein MTR_3g109720 [Medicago truncatula]
           gi|355492670|gb|AES73873.1| hypothetical protein
           MTR_3g109720 [Medicago truncatula]
          Length = 93

 Score = 65.9 bits (159), Expect(2) = 3e-18
 Identities = 33/35 (94%), Positives = 34/35 (97%)
 Frame = -1

Query: 456 RSVSGLGCVQSLLPLHSAVSSARLTSCLGIDSTSS 352
           RSV+ LGCVQSLLPLHSAVSSARLTSCLGIDSTSS
Sbjct: 44  RSVAELGCVQSLLPLHSAVSSARLTSCLGIDSTSS 78



 Score = 52.0 bits (123), Expect(2) = 3e-18
 Identities = 28/38 (73%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
 Frame = -3

Query: 667 MAYRYRSFSQPALSLIKSTLTKPKPS----SPFLFKTR 566
           MA RYRSFSQPA SLIKST+ KPK S    SPFL KTR
Sbjct: 1   MASRYRSFSQPAFSLIKSTINKPKSSSSSFSPFLLKTR 38


>gb|AFK49393.1| unknown [Lotus japonicus]
          Length = 93

 Score = 62.4 bits (150), Expect(2) = 1e-17
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -1

Query: 456 RSVSGLGCVQSLLPLHSAVSSARLTSCLGIDSTSS 352
           RSV+ LGCVQSLLPLHSAVSSARLTSCLGIDS +S
Sbjct: 44  RSVAELGCVQSLLPLHSAVSSARLTSCLGIDSRTS 78



 Score = 53.9 bits (128), Expect(2) = 1e-17
 Identities = 30/38 (78%), Positives = 32/38 (84%), Gaps = 4/38 (10%)
 Frame = -3

Query: 667 MAYRYRSFSQPALSLIKSTLTK----PKPSSPFLFKTR 566
           MA RYRSFSQPA+SLIKST+TK    PKP SPFLFKTR
Sbjct: 1   MASRYRSFSQPAMSLIKSTITKPTTNPKP-SPFLFKTR 37


>ref|XP_002309540.1| predicted protein [Populus trichocarpa] gi|222855516|gb|EEE93063.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 53.1 bits (126), Expect(2) = 3e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -1

Query: 456 RSVSGLGCVQSLLPLHSAVSSARLTSCLGIDSTSS 352
           R V  LG +QSLLP HSAVSSARLTSCL IDS SS
Sbjct: 44  RPVPQLGAIQSLLPFHSAVSSARLTSCLSIDSRSS 78



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -3

Query: 667 MAYRYRSFSQPALSLIKSTLTKP---KPSSPFLFKTR 566
           MA RYRS S+P  SL+KST  KP     S+P L   R
Sbjct: 1   MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPAR 37


>gb|ABK94391.1| unknown [Populus trichocarpa]
          Length = 91

 Score = 53.1 bits (126), Expect(2) = 3e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -1

Query: 456 RSVSGLGCVQSLLPLHSAVSSARLTSCLGIDSTSS 352
           R V  LG +QSLLP HSAVSSARLTSCL IDS SS
Sbjct: 44  RPVPQLGAIQSLLPFHSAVSSARLTSCLSIDSRSS 78



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -3

Query: 667 MAYRYRSFSQPALSLIKSTLTKP---KPSSPFLFKTR 566
           MA RYRS S+P  SL+KST  KP     S+P L   R
Sbjct: 1   MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPAR 37


>ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249040 [Vitis vinifera]
           gi|296081836|emb|CBI20841.3| unnamed protein product
           [Vitis vinifera]
          Length = 90

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -1

Query: 456 RSVSGLGCVQSLLPLHSAVSSARLTSCLGIDSTSS 352
           RS S + C+QSLLPLH+AVSSARLTSCLGIDS+SS
Sbjct: 43  RSFSQIRCLQSLLPLHTAVSSARLTSCLGIDSSSS 77


Top