BLASTX nr result
ID: Glycyrrhiza24_contig00006886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00006886
(2380 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containi... 815 0.0
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi... 798 0.0
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 788 0.0
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 786 0.0
ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ... 783 0.0
>ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Glycine max]
Length = 782
Score = 815 bits (2104), Expect = 0.0
Identities = 396/466 (84%), Positives = 434/466 (93%)
Frame = +2
Query: 2 STSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQRY 181
STSALVGPRLSLHNRVQSLIRAGDL+AASA+ARHSVFSVTRPTVFTCNAIIAAMYR+ RY
Sbjct: 74 STSALVGPRLSLHNRVQSLIRAGDLEAASAIARHSVFSVTRPTVFTCNAIIAAMYRSGRY 133
Query: 182 SEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTYR 361
EAIALFHFFF QSN+VPNIVSYNNVINTHCD+GRVDVALEVYRHV+A+APFSPSPVTYR
Sbjct: 134 EEAIALFHFFFKQSNIVPNIVSYNNVINTHCDQGRVDVALEVYRHVVANAPFSPSPVTYR 193
Query: 362 HLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKER 541
HLTKGLI + RI EA+DLLREMLSKGHGADSLVYNNLISGFL L N ++A ELFDELKER
Sbjct: 194 HLTKGLIHSERISEALDLLREMLSKGHGADSLVYNNLISGFLHLDNFDKAIELFDELKER 253
Query: 542 CLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQA 721
CLVYDGVVNAT+MEWFF +GRD++AMDSYRSL+DRQFRMTPATCNVLLE LL H K S+A
Sbjct: 254 CLVYDGVVNATFMEWFFSKGRDKDAMDSYRSLLDRQFRMTPATCNVLLEALLNHSKTSEA 313
Query: 722 WSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMDV 901
WSLF+ MLDNHTPPNFQAVNSD+FNIMVN CF LG F AL+TFK+VG+KPNSKPFAMDV
Sbjct: 314 WSLFDNMLDNHTPPNFQAVNSDSFNIMVNHCFKLGNFELALSTFKKVGSKPNSKPFAMDV 373
Query: 902 GGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFNR 1081
GYNNIIARFCEN MLS+AETLFEELCSKSLSPDVPTHRTLI+ YL+++RIDDALR+F+R
Sbjct: 374 AGYNNIIARFCENAMLSQAETLFEELCSKSLSPDVPTHRTLIEVYLRMDRIDDALRIFHR 433
Query: 1082 MVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQGL 1261
MVD+GLRVVA FGN VF ELIKNG+A+DCAQILSKMGEKDPKPDPTCYEVVI+GLCA GL
Sbjct: 434 MVDSGLRVVATFGNTVFHELIKNGKAIDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGL 493
Query: 1262 LDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1399
LD+SR+LLDEVMRYGVGVTS+LRE TE FK AGRG+EIERLLD+N
Sbjct: 494 LDKSRELLDEVMRYGVGVTSSLREFVTEVFKKAGRGDEIERLLDMN 539
Score = 103 bits (258), Expect = 2e-19
Identities = 61/139 (43%), Positives = 68/139 (48%), Gaps = 26/139 (18%)
Frame = +2
Query: 1661 TGQPYHHPQSELPPHMKRVAPQMTSNHYT---PSPPMAGHXXXXXXXXXXXXXXXXXXXX 1831
TGQPYH SE PH+ RVAPQMT+ HYT PSP MAGH
Sbjct: 645 TGQPYHPNASEHHPHVSRVAPQMTAQHYTPSGPSPQMAGHQPYGTPRGPQQWAERQYPPS 704
Query: 1832 XXXXXXXAE-----------------------TSMPPYYTAPGPSPQMTGPYHPSSGTPP 1942
+ PPY+ + GPS Q+TGPYHPSS TPP
Sbjct: 705 GLSPPMAGQHHPLAGPTPPMSGWSIPSNGASAKMSPPYHISAGPSSQVTGPYHPSSSTPP 764
Query: 1943 RHFEESHQEQSEAPEQVAA 1999
HFEESHQ+QSE PEQVAA
Sbjct: 765 -HFEESHQQQSEVPEQVAA 782
>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Glycine max]
Length = 861
Score = 798 bits (2060), Expect = 0.0
Identities = 391/466 (83%), Positives = 424/466 (90%)
Frame = +2
Query: 2 STSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQRY 181
STSALVGPRLSLHNRVQSLIRAGDLDAASA+ARHSVFS TRPTVFTCNAIIAAMYR+ RY
Sbjct: 74 STSALVGPRLSLHNRVQSLIRAGDLDAASAIARHSVFSATRPTVFTCNAIIAAMYRSGRY 133
Query: 182 SEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTYR 361
EAI LF FFF QSN+VPNIVSYNNVINTHCDEGRVDVALEVYRHV+A+APFSPSPVTYR
Sbjct: 134 EEAIGLFQFFFKQSNIVPNIVSYNNVINTHCDEGRVDVALEVYRHVLANAPFSPSPVTYR 193
Query: 362 HLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKER 541
HLTKGLI + RI EA+DLLREML+KGHGADSLVYNNLISGFL L N ++A ELF+ELKER
Sbjct: 194 HLTKGLIQSSRISEALDLLREMLTKGHGADSLVYNNLISGFLHLDNFDKAIELFEELKER 253
Query: 542 CLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQA 721
CLVYDGVVNAT+MEWFF +GRD+EAMDSYRSL+DRQFRMTPATCNVLLEVLL+H K ++A
Sbjct: 254 CLVYDGVVNATFMEWFFGKGRDKEAMDSYRSLLDRQFRMTPATCNVLLEVLLKHSKSNEA 313
Query: 722 WSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMDV 901
WSLF MLDNHTPPNFQAVNSDTFNIMVN CF LG F +ALATFK+ GTKPNSKPFAMDV
Sbjct: 314 WSLFHLMLDNHTPPNFQAVNSDTFNIMVNHCFKLGNFEDALATFKKFGTKPNSKPFAMDV 373
Query: 902 GGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFNR 1081
GYNNIIARF ENGMLS AETLFEELCSKSLSPDVPTHRTLI+AYL++ RIDDALR+FNR
Sbjct: 374 AGYNNIIARFSENGMLSHAETLFEELCSKSLSPDVPTHRTLIEAYLRMNRIDDALRIFNR 433
Query: 1082 MVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQGL 1261
MVD GLRVVA FG LIKNG+A+DCAQILSKMGEKDPKPDPTCYEVVI+GLCA GL
Sbjct: 434 MVDTGLRVVATFGRERDARLIKNGKALDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGL 493
Query: 1262 LDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1399
LD+S +LLDEVMRYGVG+TS+LRE TE FK AGR +EIERLLD+N
Sbjct: 494 LDKSLELLDEVMRYGVGLTSSLREFVTEVFKKAGRSDEIERLLDMN 539
Score = 102 bits (255), Expect = 4e-19
Identities = 60/128 (46%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Frame = +2
Query: 1661 TGQPYHHPQSELPPHMKRVAPQMTSNHYTP---SPPMAGHXXXXXXXXXXXXXXXXXXXX 1831
TGQ YH SE PPHM RVAPQMT HYTP SP MAGH
Sbjct: 734 TGQSYHPNTSEHPPHMSRVAPQMTEQHYTPSGSSPQMAGHGHQPYGTPHGPQQMEERWYP 793
Query: 1832 XXXXXXXAETS-----------MPPYYTAPGPSPQMTGPYHP-SSGTPPRHFEESHQEQS 1975
S PPY+ + PS Q+TGPYHP SS + P HFEESHQ+QS
Sbjct: 794 SSGLSPPMSGSSIPWNGASAKMSPPYHRSAAPSSQVTGPYHPSSSSSSPPHFEESHQQQS 853
Query: 1976 EAPEQVAA 1999
E PEQVAA
Sbjct: 854 EVPEQVAA 861
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Cucumis sativus]
Length = 871
Score = 788 bits (2036), Expect = 0.0
Identities = 377/466 (80%), Positives = 430/466 (92%)
Frame = +2
Query: 2 STSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQRY 181
STSALVGPRL+LHNRVQSLIRAGDLDAAS+VARHSVFS TRPTVFTCNAIIAAMYRA+RY
Sbjct: 74 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRY 133
Query: 182 SEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTYR 361
S+AIALF FFFNQSN+VPN+VSYNN+IN HCDEGRVDV LEVYRH++A+APFSPS VTYR
Sbjct: 134 SDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYR 193
Query: 362 HLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKER 541
HLTKGLI AGRI+EAVDLLREML+KGHGADSLV+NNLISGFL LGNLE+ANELFDELKER
Sbjct: 194 HLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLEKANELFDELKER 253
Query: 542 CLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQA 721
CLVYDGVVNAT+M+WFF QG+++EAM+SY+SL+DRQF+M PATCNVLLEVLL+H K ++A
Sbjct: 254 CLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEA 313
Query: 722 WSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMDV 901
W+LF+QMLDNHTPPNFQAVNSDTFNIMVNECF G+FAEA+ TF++VGT+P S+PFAMDV
Sbjct: 314 WTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQPKSRPFAMDV 373
Query: 902 GGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFNR 1081
GYNNIIARFCE GM+++AET F ELCSKSLSPDVPTHRTLI++YLK+E+IDDALRVFNR
Sbjct: 374 AGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNR 433
Query: 1082 MVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQGL 1261
MVD GLRVVA FGN VF ELIKNG+A DCAQIL+KMGE+DPKPDPTCY+VVIRGLC +G
Sbjct: 434 MVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGA 493
Query: 1262 LDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1399
LD SR+LLD++MRYG+G+T L E EAF AGR EEIERLL++N
Sbjct: 494 LDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHEEIERLLNMN 539
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 786 bits (2029), Expect = 0.0
Identities = 375/466 (80%), Positives = 429/466 (92%)
Frame = +2
Query: 2 STSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQRY 181
STSALVGPRL+LHNRVQSLIRAGDLDAAS+VARHSVFS TRPTVFTCNAIIAAMYRA+RY
Sbjct: 100 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRY 159
Query: 182 SEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTYR 361
S+AIALF FFFNQSN+VPN+VSYNN+IN HCDEGRVDV LEVYRH++A+APFSPS VTYR
Sbjct: 160 SDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYR 219
Query: 362 HLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKER 541
HLTKGLI AGRI+EAVDLLREML+KGHGADSLV+NNLISGFL LGNL +ANELFDELKER
Sbjct: 220 HLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLVKANELFDELKER 279
Query: 542 CLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQA 721
CLVYDGVVNAT+M+WFF QG+++EAM+SY+SL+DRQF+M PATCNVLLEVLL+H K ++A
Sbjct: 280 CLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEA 339
Query: 722 WSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMDV 901
W+LF+QMLDNHTPPNFQAVNSDTFNIMVNECF LG+F EA+ TF++VGT+P S+PFAMDV
Sbjct: 340 WTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMDV 399
Query: 902 GGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFNR 1081
GYNNIIARFCE GM+++AET F ELCSKSLSPDVPTHRTLI++YLK+E+IDDALRVFNR
Sbjct: 400 AGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNR 459
Query: 1082 MVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQGL 1261
MVD GLRVVA FGN VF ELIKNG+A DCAQIL+KMGE+DPKPDPTCY+VVIRGLC +G
Sbjct: 460 MVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGA 519
Query: 1262 LDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1399
LD SR+LLD++MRYG+G+T L E +AF AGR EEIERLL++N
Sbjct: 520 LDTSRELLDQIMRYGIGLTPTLEEFVKDAFVKAGRHEEIERLLNMN 565
>ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524750|gb|AET05204.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 918
Score = 783 bits (2022), Expect = 0.0
Identities = 382/466 (81%), Positives = 420/466 (90%)
Frame = +2
Query: 2 STSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSVFSVTRPTVFTCNAIIAAMYRAQRY 181
STS+LVGPRLSLHNRVQSLIRA DLDAASA ARHSVFS TRPTVFTCNAIIAAMYRA+RY
Sbjct: 74 STSSLVGPRLSLHNRVQSLIRADDLDAASAAARHSVFSSTRPTVFTCNAIIAAMYRAKRY 133
Query: 182 SEAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHVMASAPFSPSPVTYR 361
S+AIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRH++ APF PS VTYR
Sbjct: 134 SDAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHIIEHAPFGPSSVTYR 193
Query: 362 HLTKGLIAAGRIDEAVDLLREMLSKGHGADSLVYNNLISGFLELGNLERANELFDELKER 541
HLTKGLI+ GRIDEA DLL EML+K HGADS+VYNNLISGFLELGNL++ANELFDELK R
Sbjct: 194 HLTKGLISVGRIDEANDLLVEMLAKNHGADSMVYNNLISGFLELGNLDKANELFDELKGR 253
Query: 542 CLVYDGVVNATYMEWFFRQGRDREAMDSYRSLMDRQFRMTPATCNVLLEVLLRHGKDSQA 721
C VYDGVVNATYMEWFF+QGRD+EAMDSY+S MDR+FRMTPATCNVLLEVLL+H K +A
Sbjct: 254 CSVYDGVVNATYMEWFFKQGRDKEAMDSYKSFMDREFRMTPATCNVLLEVLLKHDKKKEA 313
Query: 722 WSLFEQMLDNHTPPNFQAVNSDTFNIMVNECFSLGRFAEALATFKRVGTKPNSKPFAMDV 901
W LF+QMLDNHTPPNFQAVNSDTFNIMVNECF G+F EAL TF++VGTK NSKPF MDV
Sbjct: 314 WKLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFDEALDTFRKVGTKINSKPFIMDV 373
Query: 902 GGYNNIIARFCENGMLSEAETLFEELCSKSLSPDVPTHRTLIDAYLKLERIDDALRVFNR 1081
GY NI++RFCE GM+SEA+TLF+E SK LS DVPTH +ID YLK+ IDDALRVFN+
Sbjct: 374 AGYRNIVSRFCEIGMMSEADTLFQESLSKHLSADVPTHTAMIDGYLKVGNIDDALRVFNK 433
Query: 1082 MVDAGLRVVAGFGNRVFDELIKNGRAVDCAQILSKMGEKDPKPDPTCYEVVIRGLCAQGL 1261
MVD GLRV A FGNRVFDELIKNG+ ++CAQILSKMG +DPKPDPTCYEVVI+GLCA+GL
Sbjct: 434 MVDRGLRVTATFGNRVFDELIKNGKVIECAQILSKMGGQDPKPDPTCYEVVIKGLCAEGL 493
Query: 1262 LDRSRDLLDEVMRYGVGVTSALRELATEAFKNAGRGEEIERLLDVN 1399
LD+SR+LLDEVMRYGVGVT ALRE T+ FKNAG+GEEIERLLD N
Sbjct: 494 LDKSRELLDEVMRYGVGVTPALRESVTKVFKNAGKGEEIERLLDTN 539
Score = 83.2 bits (204), Expect = 3e-13
Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Frame = +2
Query: 1661 TGQPYHHPQSELPPHMKRVAPQMTSNHYTP---SPPMAGHXXXXXXXXXXXXXXXXXXXX 1831
TGQP HHPQ + P M+R +PQ T+ YTP SP + G+
Sbjct: 791 TGQP-HHPQYQHTPRMQRASPQSTAKPYTPYGPSPQIDGYQPFGQQSGPQQTAEKPYQPS 849
Query: 1832 XXXXXXX-------------AETSMPPYYTA-PGPSPQMTGPYHPSSGTPPRHFEESHQE 1969
+E S+P + ++ PG S Q+TGPYHPSSGTPP HFEESHQ+
Sbjct: 850 KLTTPMSGQHHPMSGPYPPMSEPSLPSHGSSGPGTSSQITGPYHPSSGTPP-HFEESHQQ 908
Query: 1970 QSEAPEQVA 1996
Q E PEQVA
Sbjct: 909 QLEVPEQVA 917