BLASTX nr result

ID: Glycyrrhiza24_contig00006859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006859
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   328   1e-87
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   327   2e-87
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   317   3e-84
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot...   314   1e-83
ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   311   2e-82

>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/168 (93%), Positives = 163/168 (97%)
 Frame = -2

Query: 746 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 567
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 566 KDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVH 387
           KDMTQDSTFEFERKRNRPERYDRNL ENVLKAIPKIDKIRV+REERHHKNRMKGKKEK+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 386 REAVKELEQSINLVKAPSVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 243
           +EAVKELEQ I+LVKAPSVLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  327 bits (839), Expect = 2e-87
 Identities = 156/168 (92%), Positives = 162/168 (96%)
 Frame = -2

Query: 746 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 567
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 566 KDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVH 387
           KDMTQDSTFEFERKRNRPERYDRNL ENVLK IPKIDKIRVSREERHHKNRMKGKKEK+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 386 REAVKELEQSINLVKAPSVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 243
           +EAVKELEQ I+LVKAPSVLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  317 bits (811), Expect = 3e-84
 Identities = 149/168 (88%), Positives = 160/168 (95%)
 Frame = -2

Query: 746 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 567
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 566 KDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVH 387
           KDMTQDSTFEFERKRNRPERYDRNL ENVLKAIPKIDKIRV+REE+HHKNRMKGKK+K+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQ 120

Query: 386 REAVKELEQSINLVKAPSVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 243
            EA +ELEQ I+LVKAPSVLQ++PSLTLPK KV VSQQQ+E+NH MEE
Sbjct: 121 MEAARELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 169

 Score =  314 bits (805), Expect = 1e-83
 Identities = 151/169 (89%), Positives = 160/169 (94%), Gaps = 1/169 (0%)
 Frame = -2

Query: 746 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 567
           MRLEKCWFCSST YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 566 KDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVH 387
           KDMTQDSTFEFERKRNRPERYDRNL ENVLKAIPKIDKIRV+REE+HHKNRMKGKK+K+H
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLH 120

Query: 386 REAVKELEQSINLVKAPSVLQQEPSLTLPKTKVKVS-QQQAEENHLMEE 243
            EAV+ELEQ I+LVKAPSVLQ++P LTLPK KV VS QQQ+EENH MEE
Sbjct: 121 MEAVRELEQGISLVKAPSVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE 169


>ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable ribosome biogenesis
           protein RLP24-like [Glycine max]
          Length = 174

 Score =  311 bits (796), Expect = 2e-82
 Identities = 152/174 (87%), Positives = 159/174 (91%), Gaps = 6/174 (3%)
 Frame = -2

Query: 746 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 567
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYR VHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRXVHG 60

Query: 566 KDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREERHHKNR------MKG 405
           KDMTQDSTFEFERKRNRPERYDRNL ENVLKAIPKIDKIRVSREERHHKN+      MKG
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNKSFLTXLMKG 120

Query: 404 KKEKVHREAVKELEQSINLVKAPSVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 243
           KKEK+ +EAVKELE  I+LVKA  VLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 121 KKEKLLKEAVKELEXGISLVKARYVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 174


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