BLASTX nr result

ID: Glycyrrhiza24_contig00006841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006841
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   131   7e-29
ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   128   6e-28
gb|AFK49070.1| unknown [Lotus japonicus]                              127   2e-27
ref|XP_002301930.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
gb|ABK96425.1| unknown [Populus trichocarpa x Populus deltoides]      126   3e-27

>ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2-like [Vitis vinifera]
          Length = 69

 Score =  131 bits (330), Expect = 7e-29
 Identities = 51/57 (89%), Positives = 56/57 (98%)
 Frame = -2

Query: 488 TTYKGVTIHHPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGKG 318
           TTYKGVT+HHPKRWHT+TGKGLCA+MWFWV+YRAKQDGPVVLGWRHPWEGHD+HG G
Sbjct: 10  TTYKGVTMHHPKRWHTITGKGLCAIMWFWVMYRAKQDGPVVLGWRHPWEGHDEHGHG 66


>ref|XP_003540566.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2 [Glycine max]
          Length = 67

 Score =  128 bits (322), Expect = 6e-28
 Identities = 54/58 (93%), Positives = 55/58 (94%), Gaps = 1/58 (1%)
 Frame = -2

Query: 488 TTYKGVTIHHPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEG-HDDHGKG 318
           TTYKGVTIH PKRWHT+TGKGLCAVMWFWV YRAKQDGPVVLGWRHPWEG HDDHGKG
Sbjct: 9   TTYKGVTIHQPKRWHTITGKGLCAVMWFWVFYRAKQDGPVVLGWRHPWEGHHDDHGKG 66


>gb|AFK49070.1| unknown [Lotus japonicus]
          Length = 66

 Score =  127 bits (318), Expect = 2e-27
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = -2

Query: 488 TTYKGVTIHHPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGKG 318
           TTYKGVT+H PKRWH VTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGH DHG G
Sbjct: 9   TTYKGVTVHTPKRWHAVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHGDHGDG 65


>ref|XP_002301930.1| predicted protein [Populus trichocarpa] gi|222843656|gb|EEE81203.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score =  126 bits (316), Expect = 3e-27
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 482 YKGVTIHHPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGKG 318
           YKG+T+H PKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHG G
Sbjct: 11  YKGLTMHKPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGHG 65


>gb|ABK96425.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 68

 Score =  126 bits (316), Expect = 3e-27
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 482 YKGVTIHHPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGKG 318
           YKG+T+H PKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHG G
Sbjct: 11  YKGLTMHKPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHDDHGHG 65


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