BLASTX nr result

ID: Glycyrrhiza24_contig00006808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006808
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   127   1e-27
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   119   2e-25
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...    96   3e-18
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...    92   4e-17
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...    87   1e-15

>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/81 (75%), Positives = 66/81 (81%)
 Frame = -1

Query: 245  QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66
            QDVLFGRKTI+QRLINIAETK FSVKTQFSEPWGWCSPC +P+ +KGDK KVD + L   
Sbjct: 1821 QDVLFGRKTIKQRLINIAETKRFSVKTQFSEPWGWCSPCKNPVALKGDKMKVDPMPLEEG 1880

Query: 65   XXXXXGMDVKRSIKGFSQVFD 3
                 GMD KRSIKGFSQVFD
Sbjct: 1881 EVAEEGMDAKRSIKGFSQVFD 1901


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = -1

Query: 245  QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66
            QDVL GRKTIRQRLINIAE++ FS+K QFSEPWGWCSPCTDPI +K DKRKVDSL+L   
Sbjct: 1818 QDVLVGRKTIRQRLINIAESQRFSIKPQFSEPWGWCSPCTDPITIKRDKRKVDSLSL-EE 1876

Query: 65   XXXXXGMDVKRSIKGFSQVFD 3
                 G+DVKR +KGFSQVFD
Sbjct: 1877 GEVAEGVDVKRPLKGFSQVFD 1897


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/71 (66%), Positives = 52/71 (73%)
 Frame = -1

Query: 245  QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66
            QDVLFGRKTIRQRL NIA  K  SVKTQF EPWGWCSP TDP+ +KGD +K DS +L   
Sbjct: 1793 QDVLFGRKTIRQRLHNIAMKKNLSVKTQFWEPWGWCSPSTDPLTIKGDNKKFDSTSLEEG 1852

Query: 65   XXXXXGMDVKR 33
                 GMD+KR
Sbjct: 1853 EVVEEGMDLKR 1863


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/71 (64%), Positives = 51/71 (71%)
 Frame = -1

Query: 245  QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66
            QDVLFGRKTIRQRL NIA  K  SVKTQF EPWGWCS  TDP+ +KGD +K DS +L   
Sbjct: 1788 QDVLFGRKTIRQRLHNIAVKKNLSVKTQFWEPWGWCSLSTDPLTVKGDNKKFDSTSLEEG 1847

Query: 65   XXXXXGMDVKR 33
                 GMD+KR
Sbjct: 1848 EVVEEGMDLKR 1858


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/81 (54%), Positives = 53/81 (65%)
 Frame = -1

Query: 245  QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66
            QDVLFGRK+IRQRLINIAE+KG S K QF +PWGW     DP+  KGDK+K +  +L   
Sbjct: 1808 QDVLFGRKSIRQRLINIAESKGLSTKVQFWKPWGWSYSSLDPVATKGDKKKFEVTSLEEG 1867

Query: 65   XXXXXGMDVKRSIKGFSQVFD 3
                 G D KR  KG +Q+ D
Sbjct: 1868 EVVEEGTDSKRYAKGSTQMSD 1888


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