BLASTX nr result
ID: Glycyrrhiza24_contig00006808
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00006808 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806... 127 1e-27 ref|XP_003623963.1| Mediator of RNA polymerase II transcription ... 119 2e-25 ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781... 96 3e-18 ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782... 92 4e-17 ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 87 1e-15 >ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max] Length = 2279 Score = 127 bits (318), Expect = 1e-27 Identities = 61/81 (75%), Positives = 66/81 (81%) Frame = -1 Query: 245 QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66 QDVLFGRKTI+QRLINIAETK FSVKTQFSEPWGWCSPC +P+ +KGDK KVD + L Sbjct: 1821 QDVLFGRKTIKQRLINIAETKRFSVKTQFSEPWGWCSPCKNPVALKGDKMKVDPMPLEEG 1880 Query: 65 XXXXXGMDVKRSIKGFSQVFD 3 GMD KRSIKGFSQVFD Sbjct: 1881 EVAEEGMDAKRSIKGFSQVFD 1901 >ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 2270 Score = 119 bits (299), Expect = 2e-25 Identities = 60/81 (74%), Positives = 67/81 (82%) Frame = -1 Query: 245 QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66 QDVL GRKTIRQRLINIAE++ FS+K QFSEPWGWCSPCTDPI +K DKRKVDSL+L Sbjct: 1818 QDVLVGRKTIRQRLINIAESQRFSIKPQFSEPWGWCSPCTDPITIKRDKRKVDSLSL-EE 1876 Query: 65 XXXXXGMDVKRSIKGFSQVFD 3 G+DVKR +KGFSQVFD Sbjct: 1877 GEVAEGVDVKRPLKGFSQVFD 1897 >ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max] Length = 2240 Score = 95.9 bits (237), Expect = 3e-18 Identities = 47/71 (66%), Positives = 52/71 (73%) Frame = -1 Query: 245 QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66 QDVLFGRKTIRQRL NIA K SVKTQF EPWGWCSP TDP+ +KGD +K DS +L Sbjct: 1793 QDVLFGRKTIRQRLHNIAMKKNLSVKTQFWEPWGWCSPSTDPLTIKGDNKKFDSTSLEEG 1852 Query: 65 XXXXXGMDVKR 33 GMD+KR Sbjct: 1853 EVVEEGMDLKR 1863 >ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max] Length = 2235 Score = 92.0 bits (227), Expect = 4e-17 Identities = 46/71 (64%), Positives = 51/71 (71%) Frame = -1 Query: 245 QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66 QDVLFGRKTIRQRL NIA K SVKTQF EPWGWCS TDP+ +KGD +K DS +L Sbjct: 1788 QDVLFGRKTIRQRLHNIAVKKNLSVKTQFWEPWGWCSLSTDPLTVKGDNKKFDSTSLEEG 1847 Query: 65 XXXXXGMDVKR 33 GMD+KR Sbjct: 1848 EVVEEGMDLKR 1858 >ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera] Length = 2272 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/81 (54%), Positives = 53/81 (65%) Frame = -1 Query: 245 QDVLFGRKTIRQRLINIAETKGFSVKTQFSEPWGWCSPCTDPIPMKGDKRKVDSLALXXX 66 QDVLFGRK+IRQRLINIAE+KG S K QF +PWGW DP+ KGDK+K + +L Sbjct: 1808 QDVLFGRKSIRQRLINIAESKGLSTKVQFWKPWGWSYSSLDPVATKGDKKKFEVTSLEEG 1867 Query: 65 XXXXXGMDVKRSIKGFSQVFD 3 G D KR KG +Q+ D Sbjct: 1868 EVVEEGTDSKRYAKGSTQMSD 1888