BLASTX nr result

ID: Glycyrrhiza24_contig00006793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006793
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36895.1| unknown [Medicago truncatula]                           98   9e-29
gb|AFK34432.1| unknown [Lotus japonicus]                               98   1e-28
ref|XP_004146241.1| PREDICTED: transcription elongation factor 1...    96   7e-28
ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-26
emb|CBI30630.3| unnamed protein product [Vitis vinifera]               94   1e-26

>gb|AFK36895.1| unknown [Medicago truncatula]
          Length = 88

 Score = 98.2 bits (243), Expect(2) = 9e-29
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -2

Query: 505 KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDGA 362
           KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVN +EDDGA
Sbjct: 41  KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNTVEDDGA 88



 Score = 55.1 bits (131), Expect(2) = 9e-29
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 651 MDKLDTVFSCPFCNHGSSVECRI 583
           MDKLDTVFSCPFCNHGSSVECRI
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRI 38


>gb|AFK34432.1| unknown [Lotus japonicus]
          Length = 88

 Score = 97.8 bits (242), Expect(2) = 1e-28
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -2

Query: 505 KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDGA 362
           KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNN +DDGA
Sbjct: 41  KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNPDDDGA 88



 Score = 55.1 bits (131), Expect(2) = 1e-28
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 651 MDKLDTVFSCPFCNHGSSVECRI 583
           MDKLDTVFSCPFCNHGSSVECRI
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRI 38


>ref|XP_004146241.1| PREDICTED: transcription elongation factor 1 homolog [Cucumis
           sativus]
          Length = 88

 Score = 96.3 bits (238), Expect(2) = 7e-28
 Identities = 46/48 (95%), Positives = 46/48 (95%)
 Frame = -2

Query: 505 KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDGA 362
           KNLIGEASC ICQESFSTTITALSEAIDIYSEWIDECERVNNLEDD A
Sbjct: 41  KNLIGEASCRICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDAA 88



 Score = 53.9 bits (128), Expect(2) = 7e-28
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -3

Query: 651 MDKLDTVFSCPFCNHGSSVECRI 583
           MDKLDTVFSCPFCNHG+SVECRI
Sbjct: 16  MDKLDTVFSCPFCNHGTSVECRI 38


>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 92.0 bits (227), Expect(2) = 1e-26
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -2

Query: 505 KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDGA 362
           KNLIGEA CGICQESFS TITAL+E IDIYSEWIDECERVN+LEDDGA
Sbjct: 110 KNLIGEAVCGICQESFSMTITALTEPIDIYSEWIDECERVNSLEDDGA 157



 Score = 53.9 bits (128), Expect(2) = 1e-26
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -3

Query: 651 MDKLDTVFSCPFCNHGSSVECRI 583
           MDKLDTVFSCPFCNHG+SVECRI
Sbjct: 85  MDKLDTVFSCPFCNHGTSVECRI 107


>emb|CBI30630.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score = 93.6 bits (231), Expect(2) = 1e-26
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = -2

Query: 505 KNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNNLEDDG 365
           KNLIGEASC ICQESFSTT+TAL+E IDIYSEWIDECERVNNLEDDG
Sbjct: 74  KNLIGEASCRICQESFSTTVTALTEPIDIYSEWIDECERVNNLEDDG 120



 Score = 52.4 bits (124), Expect(2) = 1e-26
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 651 MDKLDTVFSCPFCNHGSSVECRI 583
           MDKLDTVFSCPFCNHG+ VECRI
Sbjct: 49  MDKLDTVFSCPFCNHGTGVECRI 71


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