BLASTX nr result

ID: Glycyrrhiza24_contig00006790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006790
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX20016.1| FCA gamma [Pisum sativum]                              142   4e-32
ref|XP_003609803.1| FCA [Medicago truncatula] gi|355510858|gb|AE...   138   4e-31
ref|XP_003550740.1| PREDICTED: flowering time control protein FC...   132   2e-29
ref|XP_003529516.1| PREDICTED: flowering time control protein FC...   132   3e-29
ref|XP_002279515.2| PREDICTED: flowering time control protein FC...   130   1e-28

>gb|AAX20016.1| FCA gamma [Pisum sativum]
          Length = 743

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/72 (95%), Positives = 69/72 (95%)
 Frame = -2

Query: 216 PFSGRGASPDRFDGGGNFAKLFVGSVPRTAAEEDIRPLFEEHGNVIEVALIKDRKTGQHQ 37
           PFSGRGASPD FDGG NFAKLFVGSVPRTA EEDIRPLFEEHGNVIEVALIKDRKTGQHQ
Sbjct: 74  PFSGRGASPDHFDGG-NFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQ 132

Query: 36  GCCFIKYATSEE 1
           GCCFIKYATSEE
Sbjct: 133 GCCFIKYATSEE 144


>ref|XP_003609803.1| FCA [Medicago truncatula] gi|355510858|gb|AES92000.1| FCA [Medicago
           truncatula]
          Length = 862

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/72 (93%), Positives = 68/72 (94%)
 Frame = -2

Query: 216 PFSGRGASPDRFDGGGNFAKLFVGSVPRTAAEEDIRPLFEEHGNVIEVALIKDRKTGQHQ 37
           PFSGRGASPD  DGG NFAKLFVGSVPRTA EEDIRPLFEEHGNV+EVALIKDRKTGQHQ
Sbjct: 140 PFSGRGASPDHSDGG-NFAKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQ 198

Query: 36  GCCFIKYATSEE 1
           GCCFIKYATSEE
Sbjct: 199 GCCFIKYATSEE 210


>ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
          Length = 733

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/73 (90%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 PFSGRGA-SPDRFDGGGNFAKLFVGSVPRTAAEEDIRPLFEEHGNVIEVALIKDRKTGQH 40
           PFSGRG  SPDR DGG +FAKLFVGSVPRTA+EEDIRPLFEEHGNVIEVALIKD+KTGQH
Sbjct: 68  PFSGRGGGSPDRLDGG-SFAKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQH 126

Query: 39  QGCCFIKYATSEE 1
           QGCCFIKYATSEE
Sbjct: 127 QGCCFIKYATSEE 139


>ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
          Length = 737

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/73 (90%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 PFSGRGA-SPDRFDGGGNFAKLFVGSVPRTAAEEDIRPLFEEHGNVIEVALIKDRKTGQH 40
           PFSGRG  SPD  DGG NFAKLFVGSVPRTA EEDIRPLFEEHGNVIEVALIKD+KTGQH
Sbjct: 68  PFSGRGGGSPDHLDGG-NFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQH 126

Query: 39  QGCCFIKYATSEE 1
           QGCCFIKYATSEE
Sbjct: 127 QGCCFIKYATSEE 139


>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
          Length = 785

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = -2

Query: 213 FSGRGASPDRFDGGGNFAKLFVGSVPRTAAEEDIRPLFEEHGNVIEVALIKDRKTGQHQG 34
           F GRG SPDR+DGGG FAKLFVGSVPRTA EEDIRPLFEEHGNV+EVALIKD++TGQ QG
Sbjct: 102 FPGRGGSPDRYDGGG-FAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQG 160

Query: 33  CCFIKYATSEE 1
           CCFIKYATSEE
Sbjct: 161 CCFIKYATSEE 171


Top