BLASTX nr result

ID: Glycyrrhiza24_contig00006754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006754
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   627   e-177
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        608   e-172
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        600   e-169
ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516...   528   e-147
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   509   e-142

>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
            Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  627 bits (1616), Expect = e-177
 Identities = 314/396 (79%), Positives = 334/396 (84%)
 Frame = +1

Query: 34   MAGPEPSPSPKILLAKPGLVTGGPVAGKFGRGGASEDDSMQLRSRLPSVASLNLLSDSWD 213
            MAGPEPSPSPKILLAKPGLVTG P++GKF R GA EDDS Q RSRLPSVASLNLLSDSWD
Sbjct: 1    MAGPEPSPSPKILLAKPGLVTGAPISGKFNRSGAGEDDSTQHRSRLPSVASLNLLSDSWD 60

Query: 214  FHFDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFNSSSPGMLPPFAIQSEENRAM 393
            FHFDRFLPFLTENTDFT           KS+IMNELYGF+S+SPGMLPPF IQSEENRAM
Sbjct: 61   FHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPFTIQSEENRAM 120

Query: 394  ARHCSGGIEPRISAERIILLDTQPVFSASILAEMMRPDGSSTVSVLSGESLSAELAHELM 573
            ARHCS GIEPRISAERIILLDTQPVFSAS+LAEM RPDGSST+S+L+GESLSAELAH+LM
Sbjct: 121  ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLM 180

Query: 574  GIQLAVLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXXE 753
            GIQLAV LAS+CHILLVVSEG+HDDS+W LM TVDLLKHGI                  +
Sbjct: 181  GIQLAVFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASSLSQNSSSGHD 240

Query: 754  KDNKVPEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHV 933
             DNKVPE EYMATPVFVHTKLQD    PKN L LRKALMQYFK SSFV E+TG KP+ HV
Sbjct: 241  SDNKVPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSSFVGENTGKKPSNHV 300

Query: 934  SASMVHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLS 1113
              SMVHGS +D   LNLF IPFKKK+ENPRA+HESYISALWKLRDQILSMKSPSF RP+S
Sbjct: 301  PPSMVHGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRPVS 360

Query: 1114 EREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 1221
            EREWLKNSAKIWEQVK SPTILEYCRTLQHSGMYRR
Sbjct: 361  EREWLKNSAKIWEQVKKSPTILEYCRTLQHSGMYRR 396


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  608 bits (1569), Expect = e-172
 Identities = 312/396 (78%), Positives = 329/396 (83%)
 Frame = +1

Query: 34   MAGPEPSPSPKILLAKPGLVTGGPVAGKFGRGGASEDDSMQLRSRLPSVASLNLLSDSWD 213
            MAG EPSP  KILLAKPGLVTGGPVAGKFGRGG  +DDS QLRSRLPSVASLNLLSDSWD
Sbjct: 1    MAGSEPSP--KILLAKPGLVTGGPVAGKFGRGGGGDDDSPQLRSRLPSVASLNLLSDSWD 58

Query: 214  FHFDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFNSSSPGMLPPFAIQSEENRAM 393
            FH DRFLPFLTENTDFT           KSTIMNELYGF+SSSPGMLPPFAIQSEE RAM
Sbjct: 59   FHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFAIQSEETRAM 118

Query: 394  ARHCSGGIEPRISAERIILLDTQPVFSASILAEMMRPDGSSTVSVLSGESLSAELAHELM 573
            ARHCS GIEPRIS ERIILLDTQPVFSAS+LAEMMRPDGSST+SVLSGE+LSAELAHEL+
Sbjct: 119  ARHCSTGIEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISVLSGETLSAELAHELI 178

Query: 574  GIQLAVLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXXE 753
            GIQLAVLLASICHILLVVSEGVHDDS+W LMLTVDLLKHGI                  E
Sbjct: 179  GIQLAVLLASICHILLVVSEGVHDDSLWHLMLTVDLLKHGISDPSLMTSSLSQSSSSGLE 238

Query: 754  KDNKVPEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHV 933
            KD      EYMATPVFVHTKLQD    P N + LRKALMQYF+ SSFVRE   NKP EHV
Sbjct: 239  KDKLPEHEEYMATPVFVHTKLQDQDFTPSNFVQLRKALMQYFRPSSFVREQ--NKPEEHV 296

Query: 934  SASMVHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLS 1113
            S+S+V GS MD  ++  +AIP KKKDENP A+HESY+SALWKLRDQILSMKSPSFTRP+S
Sbjct: 297  SSSLVRGSQMDSNLIKFYAIPLKKKDENPSAQHESYVSALWKLRDQILSMKSPSFTRPVS 356

Query: 1114 EREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 1221
            EREWLKNSAKIWEQVKNS TILEYCRTLQHSGMYRR
Sbjct: 357  EREWLKNSAKIWEQVKNSATILEYCRTLQHSGMYRR 392


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  600 bits (1547), Expect = e-169
 Identities = 306/396 (77%), Positives = 327/396 (82%)
 Frame = +1

Query: 34   MAGPEPSPSPKILLAKPGLVTGGPVAGKFGRGGASEDDSMQLRSRLPSVASLNLLSDSWD 213
            MAG E SP  KILLAKPGLVTGGPVAGKFGRGG  +DDS QLRSRLPS ASLNLLSDSWD
Sbjct: 1    MAGSEASP--KILLAKPGLVTGGPVAGKFGRGGGGDDDSTQLRSRLPSAASLNLLSDSWD 58

Query: 214  FHFDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFNSSSPGMLPPFAIQSEENRAM 393
            F  DRFLPFLTENTDFT           KSTIMNE+YGF+S+SPGMLPPFAIQSEE RAM
Sbjct: 59   FRIDRFLPFLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPGMLPPFAIQSEETRAM 118

Query: 394  ARHCSGGIEPRISAERIILLDTQPVFSASILAEMMRPDGSSTVSVLSGESLSAELAHELM 573
            ARHCS GIEPRIS ERIILLDTQPVFSAS+L+EMMRPDGSST+SVLSGE+LSAELAHEL+
Sbjct: 119  ARHCSTGIEPRISTERIILLDTQPVFSASVLSEMMRPDGSSTISVLSGETLSAELAHELL 178

Query: 574  GIQLAVLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXXE 753
            GIQLAVLLASICHI+LVVSEG+HDDSMW LMLTVDLLKHGI                  E
Sbjct: 179  GIQLAVLLASICHIVLVVSEGIHDDSMWHLMLTVDLLKHGI-SDPSLMTSLSQSSSSGLE 237

Query: 754  KDNKVPEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHV 933
            KD      EYMATPVFVHTKLQD    P N + LRKALMQYF+ S FVREHT NKP EHV
Sbjct: 238  KDKLPEHEEYMATPVFVHTKLQDQDFTPSNSVQLRKALMQYFRPSYFVREHTENKPEEHV 297

Query: 934  SASMVHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLS 1113
            S+S VHGS MD  ++  +AIP KKKDENPRA+HESY+SALWKLRDQILSMKSPSFTRP+S
Sbjct: 298  SSSPVHGSQMDSNMIKFYAIPLKKKDENPRAQHESYVSALWKLRDQILSMKSPSFTRPVS 357

Query: 1114 EREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 1221
            EREWLKNSAKIWE VK+SPTILEYCRTLQHSGMY R
Sbjct: 358  EREWLKNSAKIWELVKSSPTILEYCRTLQHSGMYGR 393


>ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516288|gb|AES97911.1|
            Protein SMG9 [Medicago truncatula]
          Length = 394

 Score =  528 bits (1359), Expect = e-147
 Identities = 279/399 (69%), Positives = 311/399 (77%), Gaps = 4/399 (1%)
 Frame = +1

Query: 34   MAGPEPSPSPKILLAKPGLVTGGPVAGKFGRGGASEDDSMQLRSRLPSVASLNLLSDSWD 213
            MAGP+PSPSPKILL+K GLVT      K   GG+ E+DS   R  LPSVASLNLLSDSW+
Sbjct: 1    MAGPDPSPSPKILLSKSGLVTS-----KLSYGGSGEEDSTPHRPHLPSVASLNLLSDSWN 55

Query: 214  FHFDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFNSSSPGMLPPFAIQSEENRAM 393
            FHFDRFLPFLTENTDFT           KSTIMNELYGF+S+S GMLPPFAIQSEENRAM
Sbjct: 56   FHFDRFLPFLTENTDFTVIGVIGRPGVGKSTIMNELYGFDSTSHGMLPPFAIQSEENRAM 115

Query: 394  ARHCSGGIEPRISAERIILLDTQPVFSASILAEMMRPDGSSTVSVLSGESLSAELAHELM 573
            A+ CS GIEPRIS+ERIILLDTQPVFSAS+LAE ++PDGSST+ V+ GESLSAELAHELM
Sbjct: 116  AKDCSIGIEPRISSERIILLDTQPVFSASVLAETIKPDGSSTIPVMRGESLSAELAHELM 175

Query: 574  GIQLAVLLASICHILLVVSEGVHDDSMWQLML----TVDLLKHGIXXXXXXXXXXXXXXX 741
             IQLAV LASICHILLVVSEGV D+SMW LM      VDLLKH I               
Sbjct: 176  DIQLAVFLASICHILLVVSEGVLDNSMWHLMFMIFADVDLLKHDISDPSLLASSLSQSSN 235

Query: 742  XXXEKDNKVPEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKP 921
               EKDNKVPEREY+ATPVF+HTKLQ   ++P+ +  L KALM  FKSSSFVRE+TGN P
Sbjct: 236  SGIEKDNKVPEREYLATPVFIHTKLQGRELSPRIVWLLSKALMHDFKSSSFVRENTGNNP 295

Query: 922  NEHVSASMVHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFT 1101
            +EH S+S  H + MD   L LFAIPFKKK++NPR +HESYISALWKLRDQILSMK PSF 
Sbjct: 296  DEH-SSSKFHNTDMDSNPLKLFAIPFKKKEDNPRVQHESYISALWKLRDQILSMKPPSFK 354

Query: 1102 RPLSEREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYR 1218
            RP+SEREWLK+SAKIWEQV+NS TI EY R LQHSG+YR
Sbjct: 355  RPVSEREWLKSSAKIWEQVRNSSTISEYGRALQHSGIYR 393


>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3|
            unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  509 bits (1311), Expect = e-142
 Identities = 261/409 (63%), Positives = 312/409 (76%), Gaps = 14/409 (3%)
 Frame = +1

Query: 37   AGPEPSPSPKILLAKPGLVTGGPVAGKF-------GRGGASEDDSMQLRSRLPSVASLNL 195
            + P P+P+PKILLAKPGLVT G V+ K        G GG +ED+S+ LRSRLP + SLNL
Sbjct: 11   SNPSPAPAPKILLAKPGLVTTGSVSSKLIRSGAAGGGGGGAEDESVSLRSRLPPIGSLNL 70

Query: 196  LSDSWDFHFDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFNSSSPGMLPPFAIQS 375
            LSDSW+FH DRFLPFLT+NTDFT           KSTIMNELYGF+ SSPGMLPPFAIQS
Sbjct: 71   LSDSWEFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPGMLPPFAIQS 130

Query: 376  EENRAMARHCSGGIEPRISAERIILLDTQPVFSASILAEMMRPDGSSTVSVLSGESLSAE 555
            E+ RAMARHC+ GIEPRISAER+ILLDTQPVFS S+LAEMMRPDGSST+SVL GESLS+E
Sbjct: 131  EDIRAMARHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLGGESLSSE 190

Query: 556  LAHELMGIQLAVLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXX 735
            LAHELMGIQL VLLASICHILLV+S+GVHD +MW+LMLTVDLLKHGI             
Sbjct: 191  LAHELMGIQLGVLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDLSSLTPSHSQN 250

Query: 736  XXXXXEKD--NKVPE--REYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVRE 903
                 +K+  +KV E   EY+A P+FVHTKL+D  + P+N +HLRKAL Q+F SS+FV+E
Sbjct: 251  SNLGSDKEGKDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQFFSSSTFVKE 310

Query: 904  HTGNKPNEHVSASM---VHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQI 1074
              GN   EH+ +S+   +  + +D  + NLF +P K K ++PRA++ESY S LWKLRDQ+
Sbjct: 311  KCGNTTKEHLVSSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQV 370

Query: 1075 LSMKSPSFTRPLSEREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 1221
            LSM  PSF R +SER+WL+NSAKIWE VKNSP I EYC+TLQ SGM+RR
Sbjct: 371  LSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQSSGMFRR 419


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