BLASTX nr result

ID: Glycyrrhiza24_contig00006715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006715
         (2193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549880.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   499   e-151
ref|XP_003611251.1| UDP-glucuronate 4-epimerase [Medicago trunca...   502   e-144
ref|XP_003525759.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   497   e-143
ref|XP_002874760.1| UDP-D-glucuronate 4-epimerase 5 [Arabidopsis...   488   e-140
ref|NP_192962.1| UDP-D-glucuronate 4-epimerase 5 [Arabidopsis th...   488   e-140

>ref|XP_003549880.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Glycine max]
          Length = 430

 Score =  499 bits (1286), Expect(3) = e-151
 Identities = 262/370 (70%), Positives = 280/370 (75%)
 Frame = -1

Query: 1419 KRRGDGVLGLDNFNRYYDPNLKRARQRLLSRAGVFVVEGDINDAALLRKLFDVVPFTHVM 1240
            KRRGDGV+GLDNFNRYYDP LKRARQRLL RAGVFVV+ D+ND+ALLRKLFDVVPFTHVM
Sbjct: 113  KRRGDGVVGLDNFNRYYDPALKRARQRLLDRAGVFVVDADLNDSALLRKLFDVVPFTHVM 172

Query: 1239 HLAAQAGVRYAMQNPNSYVHSNIAGFVNLLEXXXXXXXXXXXXXXXXXXXVNLLEASKSA 1060
            HLAAQAGVRYAMQNP SY+HSNIAGFVNLLE                        ASKSA
Sbjct: 173  HLAAQAGVRYAMQNPQSYIHSNIAGFVNLLE------------------------ASKSA 208

Query: 1059 NPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 880
            NPQP+IV+ASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAH+YNHIYGLSITG
Sbjct: 209  NPQPSIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHSYNHIYGLSITG 268

Query: 879  LRFFTVYGPWGRPDMAYFFFAKDILKGKQITIFEASDGGSVARDFTYIDDIVKGCLGALX 700
            LRFFTVYGPWGRPDMAYFFF KDILKGKQITIFE+ DGG+VARDFTYIDDIVKG      
Sbjct: 269  LRFFTVYGPWGRPDMAYFFFTKDILKGKQITIFESLDGGTVARDFTYIDDIVKG------ 322

Query: 699  XXXXXXXXXXXXXXXXXXXCLGALDTAXXXXXXXXXXXGPAQFRIFNLGNTSPVPVTELV 520
                               CLGALDTA           GPAQFR+FNLGNTSPVPV+ELV
Sbjct: 323  -------------------CLGALDTAKKSTGSGGKKKGPAQFRVFNLGNTSPVPVSELV 363

Query: 519  NIXXXXXXXXXXXXXVPMPRNGDVRFTHANISSAQRELGYMPTTDLEAGLKKFVRWYLDF 340
             I             +PMP NGDV+FTHANIS A R+LGY PTTDLE GL+KFV+WYL+F
Sbjct: 364  AILEKLLKVKAKKKVLPMPTNGDVKFTHANISLAHRDLGYRPTTDLETGLRKFVKWYLEF 423

Query: 339  YSPSKNKSDW 310
            YS    KS W
Sbjct: 424  YS---KKSSW 430



 Score = 47.0 bits (110), Expect(3) = e-151
 Identities = 28/40 (70%), Positives = 30/40 (75%), Gaps = 4/40 (10%)
 Frame = -1

Query: 1872 PSTPGKLKPEKHHQPPYLHRIR----LSKLTLWSSIFLAF 1765
            PSTPGKLKPEK    PY +R+R    LSKLTLWSS FLAF
Sbjct: 12   PSTPGKLKPEKS---PY-NRLRIHSSLSKLTLWSSFFLAF 47



 Score = 41.2 bits (95), Expect(3) = e-151
 Identities = 23/59 (38%), Positives = 26/59 (44%)
 Frame = -2

Query: 1676 LFFFILXXXXXXXXXXXXXXXXSWGGPDWEKXXXXXXXXXXXXXSTVLVTGASGFVGTH 1500
            LF FIL                SWGG  WEK              +VLVTGA+GFVG+H
Sbjct: 49   LFLFILSPPSPSASPRRRSLGDSWGGSHWEKRVAKSARRSSPSSLSVLVTGAAGFVGSH 107


>ref|XP_003611251.1| UDP-glucuronate 4-epimerase [Medicago truncatula]
            gi|355512586|gb|AES94209.1| UDP-glucuronate 4-epimerase
            [Medicago truncatula]
          Length = 430

 Score =  502 bits (1292), Expect(2) = e-144
 Identities = 265/370 (71%), Positives = 277/370 (74%)
 Frame = -1

Query: 1419 KRRGDGVLGLDNFNRYYDPNLKRARQRLLSRAGVFVVEGDINDAALLRKLFDVVPFTHVM 1240
            KRRGDGVLG+DNFNRYYD NLKR R ++LSRAGVFVVEGDIND  LLRKLFDVV FTHVM
Sbjct: 110  KRRGDGVLGIDNFNRYYDINLKRTRAKVLSRAGVFVVEGDINDVHLLRKLFDVVAFTHVM 169

Query: 1239 HLAAQAGVRYAMQNPNSYVHSNIAGFVNLLEXXXXXXXXXXXXXXXXXXXVNLLEASKSA 1060
            HLAAQAGVRYAM+NPNSYVHSNIAGFVNLLE                         SKSA
Sbjct: 170  HLAAQAGVRYAMRNPNSYVHSNIAGFVNLLE------------------------VSKSA 205

Query: 1059 NPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 880
            NPQPAIVYASSSSVYGLNSK PFSEKDRTDQPASLYAATKKAGEE AHTYNHIYGLS+TG
Sbjct: 206  NPQPAIVYASSSSVYGLNSKTPFSEKDRTDQPASLYAATKKAGEEFAHTYNHIYGLSVTG 265

Query: 879  LRFFTVYGPWGRPDMAYFFFAKDILKGKQITIFEASDGGSVARDFTYIDDIVKGCLGALX 700
            LRFFTVYGPWGRPDMA + F KDILKGKQIT+FE+ DGGSV RDFTYI DIVKG      
Sbjct: 266  LRFFTVYGPWGRPDMAVYLFTKDILKGKQITVFESPDGGSVTRDFTYIGDIVKG------ 319

Query: 699  XXXXXXXXXXXXXXXXXXXCLGALDTAXXXXXXXXXXXGPAQFRIFNLGNTSPVPVTELV 520
                               CLGALDTA           G AQ+RIFNLGNTSPVPV+ELV
Sbjct: 320  -------------------CLGALDTAKKSTGSGGKKKGNAQYRIFNLGNTSPVPVSELV 360

Query: 519  NIXXXXXXXXXXXXXVPMPRNGDVRFTHANISSAQRELGYMPTTDLEAGLKKFVRWYLDF 340
            NI             VPMP NGDVRFTHANIS AQRELGYMPTTDLEAGLKKFVRWYLDF
Sbjct: 361  NILEKLLKVNVKRKVVPMPINGDVRFTHANISRAQRELGYMPTTDLEAGLKKFVRWYLDF 420

Query: 339  YSPSKNKSDW 310
            +SP KNK+ W
Sbjct: 421  HSPLKNKNVW 430



 Score = 39.7 bits (91), Expect(2) = e-144
 Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 1607 WGGPDWEKXXXXXXXXXXXXXS--TVLVTGASGFVGTH 1500
            WGGP+WEK             S  TVLVTGASGFVG H
Sbjct: 67   WGGPEWEKRVTKSTRHNSPSGSPLTVLVTGASGFVGMH 104


>ref|XP_003525759.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Glycine max]
          Length = 429

 Score =  497 bits (1280), Expect(2) = e-143
 Identities = 260/370 (70%), Positives = 278/370 (75%)
 Frame = -1

Query: 1419 KRRGDGVLGLDNFNRYYDPNLKRARQRLLSRAGVFVVEGDINDAALLRKLFDVVPFTHVM 1240
            KRRGDGVLG+DNFNRYYDP LKRARQRLL RAGVFVV+ D+NDAALLRKLFDVVPFTHVM
Sbjct: 112  KRRGDGVLGIDNFNRYYDPALKRARQRLLDRAGVFVVDADLNDAALLRKLFDVVPFTHVM 171

Query: 1239 HLAAQAGVRYAMQNPNSYVHSNIAGFVNLLEXXXXXXXXXXXXXXXXXXXVNLLEASKSA 1060
            HLAAQAGVRYAMQNP SY+HSNIA F+NLLE                        ASKSA
Sbjct: 172  HLAAQAGVRYAMQNPQSYIHSNIAAFINLLE------------------------ASKSA 207

Query: 1059 NPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 880
            NPQP+IV+ASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAH+YNHIYGLSITG
Sbjct: 208  NPQPSIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHSYNHIYGLSITG 267

Query: 879  LRFFTVYGPWGRPDMAYFFFAKDILKGKQITIFEASDGGSVARDFTYIDDIVKGCLGALX 700
            LRFFTVYGPWGRPDMAYFFF KDILKGKQI IFE+ DGG+VARDFTYIDDIVKG      
Sbjct: 268  LRFFTVYGPWGRPDMAYFFFTKDILKGKQIAIFESPDGGTVARDFTYIDDIVKG------ 321

Query: 699  XXXXXXXXXXXXXXXXXXXCLGALDTAXXXXXXXXXXXGPAQFRIFNLGNTSPVPVTELV 520
                               CLGALDTA           GPAQFR+FNLGNTSPVPVTELV
Sbjct: 322  -------------------CLGALDTAKKSTGSGGKKKGPAQFRVFNLGNTSPVPVTELV 362

Query: 519  NIXXXXXXXXXXXXXVPMPRNGDVRFTHANISSAQRELGYMPTTDLEAGLKKFVRWYLDF 340
             I             +PMP NGDV+FTHANIS A R+LGY PTTDLE GL+KFV+WYL+F
Sbjct: 363  AILEKLLKVKAKKKVLPMPTNGDVKFTHANISLAHRDLGYRPTTDLETGLRKFVKWYLEF 422

Query: 339  YSPSKNKSDW 310
            YS    K+ W
Sbjct: 423  YS---KKTSW 429



 Score = 41.6 bits (96), Expect(2) = e-143
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -2

Query: 1607 WGGPDWEKXXXXXXXXXXXXXSTVLVTGASGFVGTH 1500
            WGGP WEK              +VLVTGA+GFVG+H
Sbjct: 71   WGGPHWEKRVAKSARRSSPSSLSVLVTGAAGFVGSH 106


>ref|XP_002874760.1| UDP-D-glucuronate 4-epimerase 5 [Arabidopsis lyrata subsp. lyrata]
            gi|297320597|gb|EFH51019.1| UDP-D-glucuronate 4-epimerase
            5 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  488 bits (1256), Expect(2) = e-140
 Identities = 257/370 (69%), Positives = 272/370 (73%)
 Frame = -1

Query: 1419 KRRGDGVLGLDNFNRYYDPNLKRARQRLLSRAGVFVVEGDINDAALLRKLFDVVPFTHVM 1240
            +RRGDGVLGLDNFNRYYDP LKRARQ LL R+GVFVVEGDINDA LLRKLFDVV FTHVM
Sbjct: 116  RRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVM 175

Query: 1239 HLAAQAGVRYAMQNPNSYVHSNIAGFVNLLEXXXXXXXXXXXXXXXXXXXVNLLEASKSA 1060
            HLAAQAGVRYAMQNP SYV+SNIAGFVNLLE                         SKSA
Sbjct: 176  HLAAQAGVRYAMQNPGSYVNSNIAGFVNLLE------------------------VSKSA 211

Query: 1059 NPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 880
            NPQPAIV+ASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGE IAHTYNHIYGLS+TG
Sbjct: 212  NPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGLSLTG 271

Query: 879  LRFFTVYGPWGRPDMAYFFFAKDILKGKQITIFEASDGGSVARDFTYIDDIVKGCLGALX 700
            LRFFTVYGPWGRPDMAYFFF KDILKGK IT+FE+ D GSVARDFTYIDDIVKG      
Sbjct: 272  LRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKG------ 325

Query: 699  XXXXXXXXXXXXXXXXXXXCLGALDTAXXXXXXXXXXXGPAQFRIFNLGNTSPVPVTELV 520
                               CLGALDTA           GPA FRI+NLGNTSPVPVT+LV
Sbjct: 326  -------------------CLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLV 366

Query: 519  NIXXXXXXXXXXXXXVPMPRNGDVRFTHANISSAQRELGYMPTTDLEAGLKKFVRWYLDF 340
             I             +P+PRNGDV FTHANI+ AQ ELGY P  DLE GLKKFV+WY+ F
Sbjct: 367  TILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGF 426

Query: 339  YSPSKNKSDW 310
            Y+ SK KS W
Sbjct: 427  YTGSKKKSSW 436



 Score = 39.3 bits (90), Expect(2) = e-140
 Identities = 19/36 (52%), Positives = 20/36 (55%)
 Frame = -2

Query: 1607 WGGPDWEKXXXXXXXXXXXXXSTVLVTGASGFVGTH 1500
            +GG  WEK              TVLVTGASGFVGTH
Sbjct: 75   YGGSHWEKQVRKSARPRSRGGLTVLVTGASGFVGTH 110


>ref|NP_192962.1| UDP-D-glucuronate 4-epimerase 5 [Arabidopsis thaliana]
            gi|75207685|sp|Q9STI6.1|GAE5_ARATH RecName:
            Full=UDP-glucuronate 4-epimerase 5; AltName:
            Full=UDP-glucuronic acid epimerase 5
            gi|5281036|emb|CAB45972.1| nucleotide sugar
            epimerase-like protein [Arabidopsis thaliana]
            gi|7267926|emb|CAB78268.1| nucleotide sugar
            epimerase-like protein [Arabidopsis thaliana]
            gi|23297355|gb|AAN12948.1| putative nucleotide sugar
            epimerase [Arabidopsis thaliana]
            gi|332657708|gb|AEE83108.1| UDP-D-glucuronate 4-epimerase
            5 [Arabidopsis thaliana]
          Length = 436

 Score =  488 bits (1256), Expect(2) = e-140
 Identities = 257/370 (69%), Positives = 272/370 (73%)
 Frame = -1

Query: 1419 KRRGDGVLGLDNFNRYYDPNLKRARQRLLSRAGVFVVEGDINDAALLRKLFDVVPFTHVM 1240
            +RRGDGVLGLDNFNRYYDP LKRARQ LL R+GVFVVEGDINDA LLRKLFDVV FTHVM
Sbjct: 116  RRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVM 175

Query: 1239 HLAAQAGVRYAMQNPNSYVHSNIAGFVNLLEXXXXXXXXXXXXXXXXXXXVNLLEASKSA 1060
            HLAAQAGVRYAMQNP SYV+SNIAGFVNLLE                         SKSA
Sbjct: 176  HLAAQAGVRYAMQNPGSYVNSNIAGFVNLLE------------------------VSKSA 211

Query: 1059 NPQPAIVYASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 880
            NPQPAIV+ASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGE IAHTYNHIYGLS+TG
Sbjct: 212  NPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGLSLTG 271

Query: 879  LRFFTVYGPWGRPDMAYFFFAKDILKGKQITIFEASDGGSVARDFTYIDDIVKGCLGALX 700
            LRFFTVYGPWGRPDMAYFFF KDILKGK IT+FE+ D GSVARDFTYIDDIVKG      
Sbjct: 272  LRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKG------ 325

Query: 699  XXXXXXXXXXXXXXXXXXXCLGALDTAXXXXXXXXXXXGPAQFRIFNLGNTSPVPVTELV 520
                               CLGALDTA           GPA FRI+NLGNTSPVPVT+LV
Sbjct: 326  -------------------CLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLV 366

Query: 519  NIXXXXXXXXXXXXXVPMPRNGDVRFTHANISSAQRELGYMPTTDLEAGLKKFVRWYLDF 340
             I             +P+PRNGDV FTHANI+ AQ ELGY P  DLE GLKKFV+WY+ F
Sbjct: 367  TILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGF 426

Query: 339  YSPSKNKSDW 310
            Y+ SK KS W
Sbjct: 427  YTGSKKKSSW 436



 Score = 39.3 bits (90), Expect(2) = e-140
 Identities = 19/36 (52%), Positives = 20/36 (55%)
 Frame = -2

Query: 1607 WGGPDWEKXXXXXXXXXXXXXSTVLVTGASGFVGTH 1500
            +GG  WEK              TVLVTGASGFVGTH
Sbjct: 75   YGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTH 110


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