BLASTX nr result

ID: Glycyrrhiza24_contig00006697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006697
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611578.1| GRAS family transcription factor [Medicago t...   361   7e-98
ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   352   4e-95
ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   350   2e-94
ref|XP_002332364.1| GRAS family transcription factor [Populus tr...   340   2e-91
ref|XP_004141867.1| PREDICTED: protein SHORT-ROOT-like [Cucumis ...   339   3e-91

>ref|XP_003611578.1| GRAS family transcription factor [Medicago truncatula]
           gi|355512913|gb|AES94536.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 491

 Score =  361 bits (927), Expect = 7e-98
 Identities = 177/217 (81%), Positives = 200/217 (92%)
 Frame = +3

Query: 66  SSFEFSGNNKWAHDILIETARAIAQKDTSRVQQLMWMLNELGSPYGDTQQKLASYFLQAL 245
           + F F    +WA++IL+ETARAIA+K+++R+QQLMWMLNEL SPYGD +QKLA+YFLQAL
Sbjct: 100 ADFTFELTGRWANNILLETARAIAEKNSTRLQQLMWMLNELSSPYGDIEQKLAAYFLQAL 159

Query: 246 FSRMTEAGDRTFRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGE 425
           FSRMTEAG RTFRTL SASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEG+
Sbjct: 160 FSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGD 219

Query: 426 QKLHILDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTATPGGSVHRVMKEIGARMEK 605
            KLHI+DISNTYCTQWPTLFEALATRADDTPHLRLTT+VTA  GGSV +VMKEIGARMEK
Sbjct: 220 SKLHIIDISNTYCTQWPTLFEALATRADDTPHLRLTTIVTA--GGSVQKVMKEIGARMEK 277

Query: 606 FARLMGVPFKFNVVHHAGGDLSELDFSALDLRDDEAL 716
           FARLMGVPFKFNV+HH+ GDLS+L+F  LD+++DEAL
Sbjct: 278 FARLMGVPFKFNVIHHS-GDLSDLNFLDLDIKEDEAL 313


>ref|XP_003538789.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 482

 Score =  352 bits (903), Expect = 4e-95
 Identities = 177/221 (80%), Positives = 197/221 (89%)
 Frame = +3

Query: 54  DITFSSFEFSGNNKWAHDILIETARAIAQKDTSRVQQLMWMLNELGSPYGDTQQKLASYF 233
           D+ F  FEFS + KWA DIL+ETARA+A K+T+R+QQLMWMLNEL SPYGDT QKLASYF
Sbjct: 92  DVVFP-FEFS-SGKWAQDILLETARAVADKNTTRLQQLMWMLNELSSPYGDTDQKLASYF 149

Query: 234 LQALFSRMTEAGDRTFRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEA 413
           LQA FSR+T+AGDRT++TL SASEKTCSFESTRKTVLKFQE+SPWTTFGHVA NGAILEA
Sbjct: 150 LQAFFSRITQAGDRTYKTLASASEKTCSFESTRKTVLKFQELSPWTTFGHVASNGAILEA 209

Query: 414 FEGEQKLHILDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTATPGGSVHRVMKEIGA 593
            EGE KLHI+DISNTYCTQWPTLFEALATR DDTPHLRLT+VVTA  G +  +VMKEIGA
Sbjct: 210 LEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTA--GATAQKVMKEIGA 267

Query: 594 RMEKFARLMGVPFKFNVVHHAGGDLSELDFSALDLRDDEAL 716
           RMEKFARLMGVPFKFNVVHH  G LS+LDFS LD+++DEAL
Sbjct: 268 RMEKFARLMGVPFKFNVVHHV-GQLSDLDFSVLDIKEDEAL 307


>ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 476

 Score =  350 bits (897), Expect = 2e-94
 Identities = 175/215 (81%), Positives = 193/215 (89%)
 Frame = +3

Query: 72  FEFSGNNKWAHDILIETARAIAQKDTSRVQQLMWMLNELGSPYGDTQQKLASYFLQALFS 251
           FEFSG  KWA DIL+ETARA+A K+T+R+QQLMWMLNEL SPYGDT QKLASYFLQA FS
Sbjct: 93  FEFSG--KWAQDILLETARAVADKNTTRLQQLMWMLNELSSPYGDTDQKLASYFLQAFFS 150

Query: 252 RMTEAGDRTFRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGEQK 431
           R+++AGDRT+RTL SASEKTCSFESTRKTVLKFQEVSPWTTFGHVA NGAILEA EGE K
Sbjct: 151 RISQAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPK 210

Query: 432 LHILDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTATPGGSVHRVMKEIGARMEKFA 611
           LHI+DISNTYCTQWPTLFEALATR DDTPHLRLT+VVTA    +  ++MKEIGARMEKFA
Sbjct: 211 LHIIDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTA--DATAQKLMKEIGARMEKFA 268

Query: 612 RLMGVPFKFNVVHHAGGDLSELDFSALDLRDDEAL 716
           RLMGVPFKFNVVHH  G LS+LDFS LD+++DEAL
Sbjct: 269 RLMGVPFKFNVVHHV-GQLSDLDFSMLDIKEDEAL 302


>ref|XP_002332364.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222874681|gb|EEF11812.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 510

 Score =  340 bits (871), Expect = 2e-91
 Identities = 171/238 (71%), Positives = 198/238 (83%), Gaps = 17/238 (7%)
 Frame = +3

Query: 54  DITFS-----SFEFSGNNKWAHDILIETARAIAQKDTSRVQQLMWMLNELGSPYGDTQQK 218
           D +FS     +FEFSG  KW  DIL+E+A AIA K+++R+QQLMWMLNELGSPYGDT+QK
Sbjct: 108 DFSFSPSHDLNFEFSG--KWVTDILLESAHAIADKNSARLQQLMWMLNELGSPYGDTEQK 165

Query: 219 LASYFLQALFSRMTEAGDRTFRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNG 398
           LASYFLQALFSRM ++G+R +RTL SASEKTCSF+STRK VLKFQEVSPWTTFGHV+CNG
Sbjct: 166 LASYFLQALFSRMNDSGERCYRTLASASEKTCSFDSTRKMVLKFQEVSPWTTFGHVSCNG 225

Query: 399 AILEAFEGEQKLHILDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTATPGG------ 560
           AI+EAFEGE KLHI+DISNTYCTQWPTL EALATR D+TPHL+LTTVV +   G      
Sbjct: 226 AIMEAFEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLKLTTVVASKSSGNNIGLT 285

Query: 561 ------SVHRVMKEIGARMEKFARLMGVPFKFNVVHHAGGDLSELDFSALDLRDDEAL 716
                 SVH+VMKEIG RMEKFARLMGVPFKFNV+HHA GDL +L+ + LD++DDEAL
Sbjct: 286 STGGLASVHKVMKEIGNRMEKFARLMGVPFKFNVIHHA-GDLCDLNLAELDVKDDEAL 342


>ref|XP_004141867.1| PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]
           gi|449534120|ref|XP_004174016.1| PREDICTED: protein
           SHORT-ROOT-like [Cucumis sativus]
          Length = 490

 Score =  339 bits (870), Expect = 3e-91
 Identities = 166/221 (75%), Positives = 191/221 (86%), Gaps = 5/221 (2%)
 Frame = +3

Query: 69  SFEFSGNNKWAHDILIETARAIAQKDTSRVQQLMWMLNELGSPYGDTQQKLASYFLQALF 248
           +FEFSG  +WA DIL+ETARAI+ ++++RVQQLMWMLNEL SPYGDT QKLA+YFLQALF
Sbjct: 100 NFEFSG--RWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALF 157

Query: 249 SRMTEAGDRTFRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAFEGEQ 428
           SRMT++GDR +R L SASEKTCSFESTRK +LKFQEVSPWTTFGHV+CNGA++EA EGE 
Sbjct: 158 SRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGES 217

Query: 429 KLHILDISNTYCTQWPTLFEALATRADDTPHLRLTTVVTATPGGSV-----HRVMKEIGA 593
           KLHI+DISNTYCTQWPTL EALATR DDTPHLRLTTVVT  P G        +VMKEIG 
Sbjct: 218 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGT 277

Query: 594 RMEKFARLMGVPFKFNVVHHAGGDLSELDFSALDLRDDEAL 716
           RMEKFARLMGVPFKFN ++H+ GDLSELD + LD+++DEAL
Sbjct: 278 RMEKFARLMGVPFKFNALYHS-GDLSELDMAKLDIKEDEAL 317


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