BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006692
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glyci...   360   7e-97
ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820...   359   9e-97
ref|XP_003600719.1| THO complex subunit [Medicago truncatula] gi...   311   3e-82
ref|XP_002531919.1| RNA and export factor binding protein, putat...   280   5e-73
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   270   5e-70

>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
          Length = 298

 Score =  360 bits (923), Expect = 7e-97
 Identities = 192/259 (74%), Positives = 204/259 (78%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1001 MSGAFNSRRMAGPGNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQSDLFEDSL 822
            M+GA +SRRMAG  NGGRTTGAVRRGPLMVNTRPSSYAIAKSIRR RPFPWQ DLFEDSL
Sbjct: 44   MAGAVSSRRMAGASNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSL 103

Query: 821  RAAGIQGIEVGTKLYVSNLDHGVTNEDIRELFCELGDLKHYAVHYDKNGHSSGSAEVVYT 642
            RAAGIQG+EVGTKLYVSNLDHGVTNEDIRELF ELG+LK +AVHYDKNGH SGSAEVVYT
Sbjct: 104  RAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYT 163

Query: 641  RRSDAFAALKRYNNVLLDGKPMKIEIVGANAELPISARVNVTGMNGQRKRTVVMTPRGGR 462
            RRSDAFAALKRYNNVLLDGKPMKIEIVG+N+ELPISARVNVTG+NG+RKRTVVMTPRGG+
Sbjct: 164  RRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTPRGGQ 223

Query: 461  -GGGPAMLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDAVDKS 285
             GGGP M N                                           RKDAV+KS
Sbjct: 224  AGGGPTMPN----RGAGRGRRGGPRSGSGRGGGGGRGRGRGSRGGGGGRGRGRKDAVEKS 279

Query: 284  AEELDMELETYHAEAMHIS 228
            AEELD ELETYHAEAM+IS
Sbjct: 280  AEELDKELETYHAEAMNIS 298


>ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
          Length = 298

 Score =  359 bits (922), Expect = 9e-97
 Identities = 193/259 (74%), Positives = 203/259 (78%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1001 MSGAFNSRRMAGPGNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQSDLFEDSL 822
            M GA NSRRMAG GNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRR RPFPWQ DLFEDSL
Sbjct: 45   MVGAVNSRRMAGAGNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSL 104

Query: 821  RAAGIQGIEVGTKLYVSNLDHGVTNEDIRELFCELGDLKHYAVHYDKNGHSSGSAEVVYT 642
            RAAGIQG+EVGTKLYVSNLDHGVTNEDIRELF ELG+LK +AVHYDKNGH SGSAEVVYT
Sbjct: 105  RAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYT 164

Query: 641  RRSDAFAALKRYNNVLLDGKPMKIEIVGANAELPISARVNVTGMNGQRKRTVVMTPRGGR 462
            RRSDAFAALKRYNNVLLDGKPMKIEIVG+N+ELPISARVNVTG+NG+RKRTVVMT RGG+
Sbjct: 165  RRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTSRGGQ 224

Query: 461  -GGGPAMLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDAVDKS 285
             GGGPAM                                             RKDAV+KS
Sbjct: 225  AGGGPAM-----PTRGAGWGRRGGPRSGSGRGGAGGRGRGRGRGGAGGRGRGRKDAVEKS 279

Query: 284  AEELDMELETYHAEAMHIS 228
            AEELD ELETYHAEAM+IS
Sbjct: 280  AEELDKELETYHAEAMNIS 298


>ref|XP_003600719.1| THO complex subunit [Medicago truncatula]
           gi|355489767|gb|AES70970.1| THO complex subunit
           [Medicago truncatula]
          Length = 291

 Score =  311 bits (797), Expect = 3e-82
 Identities = 174/259 (67%), Positives = 186/259 (71%), Gaps = 5/259 (1%)
 Frame = -3

Query: 998 SGAFNSRRMAGPGNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQSDLFEDSLR 819
           +GA N RR +   NGGRT GAVRRGPL VNTR SSYAIAKSIRR +   WQSDLFEDSLR
Sbjct: 43  TGAVNGRRTS---NGGRT-GAVRRGPLNVNTRASSYAIAKSIRRPKTLAWQSDLFEDSLR 98

Query: 818 AAGIQGIEVGTKLYVSNLDHGVTNEDIRELFCELGDLKHYAVHYDKNGHSSGSAEVVYTR 639
           AAGIQG+E  TKLYVSNLD GVTNEDIRELF ELG+LK YAVHYDKNGH +GSAEVVY R
Sbjct: 99  AAGIQGVEADTKLYVSNLDRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNR 158

Query: 638 RSDAFAALKRYNNVLLDGKPMKIEIVGANAELPISARV-----NVTGMNGQRKRTVVMTP 474
           RSDAFAALKRYNNVLLDGKPMKIEIVG N+ LP++ARV     NV+ MNGQRKRTVVMTP
Sbjct: 159 RSDAFAALKRYNNVLLDGKPMKIEIVGTNSALPVTARVNVSSMNVSAMNGQRKRTVVMTP 218

Query: 473 RGGRGGGPAMLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDAV 294
           RGGRGGGPAMLN                                           RKD V
Sbjct: 219 RGGRGGGPAMLN--------RGAGWGRRGGSRGGSGSMRGRGRGRPGRGGGRGRGRKDGV 270

Query: 293 DKSAEELDMELETYHAEAM 237
           +KSAE+LD ELETYHAEAM
Sbjct: 271 EKSAEQLDKELETYHAEAM 289


>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223528429|gb|EEF30463.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 268

 Score =  280 bits (717), Expect = 5e-73
 Identities = 152/252 (60%), Positives = 172/252 (68%)
 Frame = -3

Query: 992 AFNSRRMAGPGNGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQSDLFEDSLRAA 813
           A   R   G  +GGR TGA R+GPL VN RPS ++IAK  RR R  PWQ DL EDS+RAA
Sbjct: 27  ARRGRGRGGSFSGGRMTGAGRKGPLSVNARPSQFSIAKPNRRIRNLPWQHDLLEDSIRAA 86

Query: 812 GIQGIEVGTKLYVSNLDHGVTNEDIRELFCELGDLKHYAVHYDKNGHSSGSAEVVYTRRS 633
           GI G+EVGTKLYVSNL++GV+NEDIRELF E+GDLK YAVHYDKNG S+GSAEVVYTRRS
Sbjct: 87  GITGVEVGTKLYVSNLEYGVSNEDIRELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRS 146

Query: 632 DAFAALKRYNNVLLDGKPMKIEIVGANAELPISARVNVTGMNGQRKRTVVMTPRGGRGGG 453
           +AFAALK+YNNVLLDGKPMKIEIVG   E PISARVNVTG+NG+RKRTVVMTP  GRG G
Sbjct: 147 EAFAALKKYNNVLLDGKPMKIEIVGVTGEAPISARVNVTGINGRRKRTVVMTPGPGRGRG 206

Query: 452 PAMLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDAVDKSAEEL 273
            A  N                                           +K  ++KSA+EL
Sbjct: 207 FAPSN------------RGAGQRSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEKSADEL 254

Query: 272 DMELETYHAEAM 237
           D EL+TYHAEAM
Sbjct: 255 DKELDTYHAEAM 266


>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  270 bits (691), Expect = 5e-70
 Identities = 152/260 (58%), Positives = 176/260 (67%), Gaps = 6/260 (2%)
 Frame = -3

Query: 995 GAFNSRRMAGP----GNGGRTTGAV-RRGPLMVNTRPSSYAIAKSIRRTRPFPWQSDLFE 831
           G   +RR  GP     NGGR +G   RRGPL VN RPSSYAIAKS RRT+  PWQ DLFE
Sbjct: 23  GRGRARRGRGPIGGSFNGGRMSGIPPRRGPLRVNARPSSYAIAKSSRRTK-IPWQHDLFE 81

Query: 830 DSLRAAGIQGIEVGTKLYVSNLDHGVTNEDIRELFCELGDLKHYAVHYDKNGHSSGSAEV 651
           DSLRAAG+ G+E GTKLY+SNLD+GVTNEDIRELF E+GD+K YAVHY+KNG  SGSAEV
Sbjct: 82  DSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRYAVHYEKNGRPSGSAEV 141

Query: 650 VYTRRSDAFAALKRYNNVLLDGKPMKIEIVGANAELPISARVNVT-GMNGQRKRTVVMTP 474
           VYTRRSDAFAA+KRYNNVLLDGKPMKIEI+G+++++P+SARVNV  G+NG+R+RTVVMTP
Sbjct: 142 VYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVNVIGGVNGKRRRTVVMTP 201

Query: 473 RGGRGGGPAMLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDAV 294
             G   G   +N                                           RK  V
Sbjct: 202 GVGHARGSTAIN-------------RSSSRRGRGGLSNGRGRGRAGSRGRGRGRGRKQPV 248

Query: 293 DKSAEELDMELETYHAEAMH 234
           +KSA ELD EL+ YHAEAMH
Sbjct: 249 EKSAVELDKELDNYHAEAMH 268