BLASTX nr result

ID: Glycyrrhiza24_contig00006547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006547
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   417   e-114
ref|XP_003617791.1| Pre-mRNA-splicing factor ISY1-like protein [...   417   e-114
ref|XP_003533926.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   414   e-113
ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   398   e-108
ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   397   e-108

>ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Glycine max]
          Length = 299

 Score =  417 bits (1071), Expect = e-114
 Identities = 216/299 (72%), Positives = 231/299 (77%)
 Frame = -3

Query: 1149 MARNEEKAQSMLNRFITMKAXXXXXXXXXXPFLASECRDLNEADKWRQQIMREIGRKVAE 970
            MARNEEKAQSMLNRFITMKA          PFLASECRDL+EADKWRQQIMREIGRKVAE
Sbjct: 1    MARNEEKAQSMLNRFITMKAEEKKKPKERRPFLASECRDLSEADKWRQQIMREIGRKVAE 60

Query: 969  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYSRHSAKMTDLDGNIVDVPNP 790
            IQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNYS+HSAKMTDLDGNIVDVPNP
Sbjct: 61   IQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYSKHSAKMTDLDGNIVDVPNP 120

Query: 789  SGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDEEDGIXXXX 610
             GRGPGYRYFGAAKKLPGV+ELF+KPPELR+RRTRYDIYKRIDA+YYGYRDEEDG+    
Sbjct: 121  GGRGPGYRYFGAAKKLPGVKELFEKPPELRRRRTRYDIYKRIDASYYGYRDEEDGVLARL 180

Query: 609  XXXXXXXXXXXXXXXXXXLDAIRREARKGVKSGEVAEVTTAAXXXXXXXXXXXXXXXXXX 430
                              LD +RREARKGV SGEVAEVT  A                  
Sbjct: 181  EGPAEEAMRREAAEEWRRLDEVRREARKGVVSGEVAEVTAVAREVLKEDEEEVVEEERAR 240

Query: 429  XXXXXXXXXEFVVHVPLPDEKEIERMVLQKKKMELLNRYVSEGLMEEQSEAKDMLNIHQ 253
                     EFVVHVPLPDEKEIER VL+KKK +LL+RY SEGL+EEQ+EAKDMLNI +
Sbjct: 241  EREEERERREFVVHVPLPDEKEIERRVLEKKKKDLLSRYASEGLVEEQTEAKDMLNIQR 299


>ref|XP_003617791.1| Pre-mRNA-splicing factor ISY1-like protein [Medicago truncatula]
            gi|355519126|gb|AET00750.1| Pre-mRNA-splicing factor
            ISY1-like protein [Medicago truncatula]
          Length = 303

 Score =  417 bits (1071), Expect = e-114
 Identities = 220/303 (72%), Positives = 233/303 (76%), Gaps = 4/303 (1%)
 Frame = -3

Query: 1149 MARNEEKAQSMLNRFITMKAXXXXXXXXXXPFLASECRDLNEADKWRQQIMREIGRKVAE 970
            MARNEEKAQSMLNRFITMKA          PFLASECRDLNEADKWRQQIMREIGRKVAE
Sbjct: 1    MARNEEKAQSMLNRFITMKAEEKKKPKERRPFLASECRDLNEADKWRQQIMREIGRKVAE 60

Query: 969  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYSRHSAKMTDLDGNIVDVPNP 790
            IQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY+RHSAKMTDLDGNIVDVPNP
Sbjct: 61   IQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYARHSAKMTDLDGNIVDVPNP 120

Query: 789  SGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDEEDGIXXXX 610
            SGRGPGYRYFGAAKKLPGVRELF+KPPELRKRRTRYDIYKRI+AAYYGYRD+EDGI    
Sbjct: 121  SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRINAAYYGYRDDEDGILERV 180

Query: 609  XXXXXXXXXXXXXXXXXXLDAIRREARKGVKSGEVAEVTTAA----XXXXXXXXXXXXXX 442
                              LD IR+EARK V+SGEV EVT A                   
Sbjct: 181  EAPAEECMRREAVEEWERLDRIRKEARKAVRSGEVVEVTAATREILHEEEEDVVEEERMK 240

Query: 441  XXXXXXXXXXXXXEFVVHVPLPDEKEIERMVLQKKKMELLNRYVSEGLMEEQSEAKDMLN 262
                         EFVVHVPLPDEKEIE+MVLQKKK +LLNRYVS+ LMEEQ+EAKD+LN
Sbjct: 241  EREMRERLDEKEREFVVHVPLPDEKEIEKMVLQKKKADLLNRYVSDVLMEEQTEAKDLLN 300

Query: 261  IHQ 253
            IH+
Sbjct: 301  IHR 303


>ref|XP_003533926.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Glycine max]
          Length = 299

 Score =  414 bits (1063), Expect = e-113
 Identities = 215/299 (71%), Positives = 230/299 (76%)
 Frame = -3

Query: 1149 MARNEEKAQSMLNRFITMKAXXXXXXXXXXPFLASECRDLNEADKWRQQIMREIGRKVAE 970
            MARNEEKAQSMLNRFITMKA          PFLASECRDL+EADKWRQQIMREIGRKVAE
Sbjct: 1    MARNEEKAQSMLNRFITMKAEEKKKPKERRPFLASECRDLSEADKWRQQIMREIGRKVAE 60

Query: 969  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYSRHSAKMTDLDGNIVDVPNP 790
            IQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNYS+HSAKMTDLDGNIVDVPNP
Sbjct: 61   IQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYSKHSAKMTDLDGNIVDVPNP 120

Query: 789  SGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDEEDGIXXXX 610
             GRGPGYRYFGAAKKLPGV+ELF+KPPELR+RRTRYDIYKRIDA+YYGYRDEEDG+    
Sbjct: 121  GGRGPGYRYFGAAKKLPGVKELFEKPPELRRRRTRYDIYKRIDASYYGYRDEEDGVLARL 180

Query: 609  XXXXXXXXXXXXXXXXXXLDAIRREARKGVKSGEVAEVTTAAXXXXXXXXXXXXXXXXXX 430
                              LD +RREARK V SGEVAEVT  A                  
Sbjct: 181  EGPAEEAMRREAAEEWRRLDEVRREARKWVVSGEVAEVTAVAREVLKEDEEEVVEEERAR 240

Query: 429  XXXXXXXXXEFVVHVPLPDEKEIERMVLQKKKMELLNRYVSEGLMEEQSEAKDMLNIHQ 253
                     EFVVHVPLPDEKEIER VL+KKK +LL+RY SEGL+EEQ+EAKDMLNI +
Sbjct: 241  EREEERERREFVVHVPLPDEKEIERRVLEKKKKDLLSRYASEGLVEEQTEAKDMLNIQR 299


>ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1 [Vitis
            vinifera] gi|359476953|ref|XP_003631919.1| PREDICTED:
            pre-mRNA-splicing factor ISY1 homolog isoform 2 [Vitis
            vinifera] gi|359476955|ref|XP_003631920.1| PREDICTED:
            pre-mRNA-splicing factor ISY1 homolog isoform 3 [Vitis
            vinifera] gi|147773415|emb|CAN60270.1| hypothetical
            protein VITISV_029395 [Vitis vinifera]
          Length = 298

 Score =  398 bits (1022), Expect = e-108
 Identities = 208/299 (69%), Positives = 229/299 (76%)
 Frame = -3

Query: 1149 MARNEEKAQSMLNRFITMKAXXXXXXXXXXPFLASECRDLNEADKWRQQIMREIGRKVAE 970
            MARNEEKAQSMLNRFIT+K           P+LASECRDL EADKWRQQIMREIGRKVAE
Sbjct: 1    MARNEEKAQSMLNRFITLKNEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 969  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYSRHSAKMTDLDGNIVDVPNP 790
            IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNY++HSAKMTDL+GNIVDVPNP
Sbjct: 61   IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 789  SGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDEEDGIXXXX 610
            SGRGPGYRYFGAAKKLPGVRELF+KPPELRKR++RYDIYKRIDA+YYGYRD+EDG+    
Sbjct: 121  SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKV 180

Query: 609  XXXXXXXXXXXXXXXXXXLDAIRREARKGVKSGEVAEVTTAAXXXXXXXXXXXXXXXXXX 430
                              L+ I+REAR+ VKSGEVA V  A                   
Sbjct: 181  EGPAEERMRAAKLAEWEALEEIKREARRAVKSGEVASVAPAG-ILFEEEEDVVEEERQAA 239

Query: 429  XXXXXXXXXEFVVHVPLPDEKEIERMVLQKKKMELLNRYVSEGLMEEQSEAKDMLNIHQ 253
                     EFVVHVPLPDEKEIERMV++KKKMELL++Y SEGL+EEQ+EAK MLNI +
Sbjct: 240  REKENEKEREFVVHVPLPDEKEIERMVVEKKKMELLSKYTSEGLLEEQTEAKAMLNIQR 298


>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
            gi|449491085|ref|XP_004158794.1| PREDICTED:
            pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
            sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
            pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
            sativus]
          Length = 303

 Score =  397 bits (1021), Expect = e-108
 Identities = 208/303 (68%), Positives = 228/303 (75%), Gaps = 4/303 (1%)
 Frame = -3

Query: 1149 MARNEEKAQSMLNRFITMKAXXXXXXXXXXPFLASECRDLNEADKWRQQIMREIGRKVAE 970
            MARNEEKAQSMLNRFI +KA          P+LASECRDL EADKWRQQIMREIGRKVAE
Sbjct: 1    MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 969  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYSRHSAKMTDLDGNIVDVPNP 790
            IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNY++HSAKMTDLDGNIVDVPNP
Sbjct: 61   IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLDGNIVDVPNP 120

Query: 789  SGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDEEDGIXXXX 610
            SGRGPGYRYFGAAKKLPGVRELF+KPPELRKRRTRYDIYKRIDA+YYGYRD+EDG+    
Sbjct: 121  SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERV 180

Query: 609  XXXXXXXXXXXXXXXXXXLDAIRREARKGVKSGEVAEVTTAA----XXXXXXXXXXXXXX 442
                              ++ IR+EA++ VKSGEVA V   A                  
Sbjct: 181  EGPSEERMRAEAVEEWQRMEEIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERK 240

Query: 441  XXXXXXXXXXXXXEFVVHVPLPDEKEIERMVLQKKKMELLNRYVSEGLMEEQSEAKDMLN 262
                         EFVVHVPLPDEKEIE+MVL+KKKMELL++Y S+ L+EEQSEAK MLN
Sbjct: 241  REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLN 300

Query: 261  IHQ 253
            I +
Sbjct: 301  IQR 303


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