BLASTX nr result

ID: Glycyrrhiza24_contig00006502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006502
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycin...   177   8e-43
ref|XP_003638524.1| DNA-(apurinic or apyrimidinic site) lyase [M...   171   6e-41
ref|XP_003638523.1| DNA-(apurinic or apyrimidinic site) lyase [M...   171   6e-41
ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   163   1e-38
ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis]...   158   5e-37

>ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycine max]
          Length = 355

 Score =  177 bits (449), Expect = 8e-43
 Identities = 90/130 (69%), Positives = 99/130 (76%)
 Frame = -2

Query: 392 MKRYFQAVEKGSDGSGXXXXXXXXXXXXXXXXXEPLKFMTWNANSLFLRVKNNWADFTNL 213
           MKR+F+ VEK SDGS                  EPLKFMTWNANS  LRVKNNW DFTNL
Sbjct: 1   MKRFFKVVEKDSDGSVKKPRENDSEAEESNEKKEPLKFMTWNANSFLLRVKNNWPDFTNL 60

Query: 212 VTTFDPDVIAIQEVRMPAAGGSKGSPKNQADIKDDTNPSREEKKILMRALSNPPFGNYRV 33
           +TTFDPD+IAIQEVRMPAA G+KG+ K Q +IKDDT+ +REEKKIL RALS PPFGNY V
Sbjct: 61  ITTFDPDLIAIQEVRMPAA-GAKGASKIQGEIKDDTSAAREEKKILTRALSAPPFGNYHV 119

Query: 32  WWSLADSKYA 3
           WWSLADSKYA
Sbjct: 120 WWSLADSKYA 129


>ref|XP_003638524.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355504459|gb|AES85662.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 278

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/141 (61%), Positives = 101/141 (71%), Gaps = 11/141 (7%)
 Frame = -2

Query: 392 MKRYFQAVEKGSDGSGXXXXXXXXXXXXXXXXXE-------PLKFMTWNANSLFLRVKNN 234
           MKR+F+ +EK S+                    E       PLKFMTWNANSL LRVKNN
Sbjct: 1   MKRFFKVIEKDSEKCSKKPKENENEEEKKQDENEEEATKKEPLKFMTWNANSLLLRVKNN 60

Query: 233 WADFTNLVTTFDPDVIAIQEVRMPAAGGS----KGSPKNQADIKDDTNPSREEKKILMRA 66
           W++F+N +TTFDPDVIAIQEVRMPAA  S    K +PKNQA++KDDTN +REEK+ILMRA
Sbjct: 61  WSEFSNFITTFDPDVIAIQEVRMPAASSSSSNSKSAPKNQAEVKDDTNAAREEKRILMRA 120

Query: 65  LSNPPFGNYRVWWSLADSKYA 3
           LSNPPFGNY VWWSLA+SKYA
Sbjct: 121 LSNPPFGNYHVWWSLAESKYA 141


>ref|XP_003638523.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355504458|gb|AES85661.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 367

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/141 (61%), Positives = 101/141 (71%), Gaps = 11/141 (7%)
 Frame = -2

Query: 392 MKRYFQAVEKGSDGSGXXXXXXXXXXXXXXXXXE-------PLKFMTWNANSLFLRVKNN 234
           MKR+F+ +EK S+                    E       PLKFMTWNANSL LRVKNN
Sbjct: 1   MKRFFKVIEKDSEKCSKKPKENENEEEKKQDENEEEATKKEPLKFMTWNANSLLLRVKNN 60

Query: 233 WADFTNLVTTFDPDVIAIQEVRMPAAGGS----KGSPKNQADIKDDTNPSREEKKILMRA 66
           W++F+N +TTFDPDVIAIQEVRMPAA  S    K +PKNQA++KDDTN +REEK+ILMRA
Sbjct: 61  WSEFSNFITTFDPDVIAIQEVRMPAASSSSSNSKSAPKNQAEVKDDTNAAREEKRILMRA 120

Query: 65  LSNPPFGNYRVWWSLADSKYA 3
           LSNPPFGNY VWWSLA+SKYA
Sbjct: 121 LSNPPFGNYHVWWSLAESKYA 141


>ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis
           vinifera] gi|297733638|emb|CBI14885.3| unnamed protein
           product [Vitis vinifera]
          Length = 357

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/136 (61%), Positives = 94/136 (69%), Gaps = 6/136 (4%)
 Frame = -2

Query: 392 MKRYFQAVEKGSDGSGXXXXXXXXXXXXXXXXXE------PLKFMTWNANSLFLRVKNNW 231
           MKRYFQ +  G DGS                         PLKF+TWNANS  +RVKNNW
Sbjct: 1   MKRYFQPI--GKDGSSKKPSLSKEDGDENTDQVSEEEKKEPLKFLTWNANSFLIRVKNNW 58

Query: 230 ADFTNLVTTFDPDVIAIQEVRMPAAGGSKGSPKNQADIKDDTNPSREEKKILMRALSNPP 51
            +FT  V+  DPDVIA+QEVRMPAAG SKG+PKN  ++KDDT+ SREEKKILM ALS PP
Sbjct: 59  PEFTKFVSDLDPDVIAVQEVRMPAAG-SKGAPKNHGELKDDTSSSREEKKILMHALSRPP 117

Query: 50  FGNYRVWWSLADSKYA 3
           FGNYRVWWSLADSKYA
Sbjct: 118 FGNYRVWWSLADSKYA 133


>ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis]
           gi|223550381|gb|EEF51868.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 326

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/96 (76%), Positives = 86/96 (89%)
 Frame = -2

Query: 290 PLKFMTWNANSLFLRVKNNWADFTNLVTTFDPDVIAIQEVRMPAAGGSKGSPKNQADIKD 111
           PLKF+TWNANSL LR KN+W +FT  V+T DPDVIAIQEVRMPAAG SKG+PKN  ++KD
Sbjct: 41  PLKFITWNANSLLLRAKNDWPEFTKFVSTLDPDVIAIQEVRMPAAG-SKGAPKNPGELKD 99

Query: 110 DTNPSREEKKILMRALSNPPFGNYRVWWSLADSKYA 3
           DT+ SREEK+ILMRALS+PPFG+Y++WWSLADSKYA
Sbjct: 100 DTSSSREEKQILMRALSSPPFGSYKIWWSLADSKYA 135


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