BLASTX nr result

ID: Glycyrrhiza24_contig00006470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00006470
         (2131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519163.1| PREDICTED: translation initiation factor IF-...   306   1e-80
ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycin...   304   5e-80
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   286   2e-74
ref|XP_002533227.1| translation initiation factor if-3, putative...   281   4e-73
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   275   3e-71

>ref|XP_003519163.1| PREDICTED: translation initiation factor IF-3-like isoform 1
           [Glycine max]
          Length = 275

 Score =  306 bits (785), Expect = 1e-80
 Identities = 174/283 (61%), Positives = 195/283 (68%), Gaps = 7/283 (2%)
 Frame = +3

Query: 81  MAGITSVPFKLKLFHHHNSTASPLFSSY--KLFGLSLSNPCXXXXXXXXXXXXXXDVTVX 254
           MAGIT+ PFKL        +  PLFS+   KLFGL LSNP                    
Sbjct: 1   MAGITTFPFKL--------SHCPLFSTSDSKLFGLPLSNPYSIKFDPSSLSSTSLPYVTA 52

Query: 255 XXXXXXXXXXXXXXXXXQK-----GPDDDQALDLSTLRSDTVRLIDENQNMVGVVSTGQA 419
                            +        DDD+ALDLSTLRSDTVRLID++QNMVGVVS   A
Sbjct: 53  RYYGGGGGASPRSPNDPRSRKSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDA 112

Query: 420 LQMADDAELDLVIVSPDADPPVVRLMDYSXXXXXXXXXXXXXXXXSAANRMDLKELKMGY 599
           +QMA+D ELDLVI+SPDADPPVVR+MDYS                SAANRMDLKELKMGY
Sbjct: 113 IQMAEDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKREQQKKSAANRMDLKELKMGY 172

Query: 600 NIDQHDYSVRLKAAQKFLKDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGKLGKEEA 779
           NID+HDYSVRLKAAQKFLKDGDKVK+IVNLKGRENEFRN+AI LI RFQNDVG+LG EE 
Sbjct: 173 NIDEHDYSVRLKAAQKFLKDGDKVKVIVNLKGRENEFRNMAIGLITRFQNDVGELGIEET 232

Query: 780 KNFRDKNIFIILVPNQAAVQKSQETPKKRDKSAENEVSISVEA 908
           KNFRD+NIFIILVPN+ AVQK+QE PKKRDKSA +EV+IS +A
Sbjct: 233 KNFRDRNIFIILVPNKVAVQKTQEPPKKRDKSAADEVTISAQA 275


>ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycine max]
           gi|255638877|gb|ACU19741.1| unknown [Glycine max]
          Length = 275

 Score =  304 bits (779), Expect = 5e-80
 Identities = 175/282 (62%), Positives = 196/282 (69%), Gaps = 6/282 (2%)
 Frame = +3

Query: 81  MAGITSVPFKLKLFHHHNSTASPLFSSY--KLFGLSLSNPCXXXXXXXXXXXXXXD-VTV 251
           MAGIT+ PFKL  F         LFSS   KLFGL LSNP                 V  
Sbjct: 1   MAGITTSPFKLSHF-------PTLFSSSDSKLFGLPLSNPYSLKFDPSSLSTTSLSYVKA 53

Query: 252 XXXXXXXXXXXXXXXXXXQKGPD---DDQALDLSTLRSDTVRLIDENQNMVGVVSTGQAL 422
                             +K  D   DD+ALDLSTLRSDTVRLID++QNMVGVVS   A+
Sbjct: 54  RYYGGGGGPPRSPNDSRFRKSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAI 113

Query: 423 QMADDAELDLVIVSPDADPPVVRLMDYSXXXXXXXXXXXXXXXXSAANRMDLKELKMGYN 602
           QMA+D ELDLVI+SPDADPPVVR+MDYS                SAANRMDLKELKMGYN
Sbjct: 114 QMAEDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAANRMDLKELKMGYN 173

Query: 603 IDQHDYSVRLKAAQKFLKDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGKLGKEEAK 782
           ID+HDYSVRLKAAQKFLKDG+KVK+IVNLKGRENEFRN+AI LI RFQNDVG+LG EE K
Sbjct: 174 IDEHDYSVRLKAAQKFLKDGNKVKVIVNLKGRENEFRNMAIALITRFQNDVGELGIEETK 233

Query: 783 NFRDKNIFIILVPNQAAVQKSQETPKKRDKSAENEVSISVEA 908
           NFRD+NIFIILVPN+ A+QK+QE PKKRDKSA +EVS+S +A
Sbjct: 234 NFRDRNIFIILVPNKVAMQKTQEPPKKRDKSAADEVSVSAQA 275


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  286 bits (731), Expect = 2e-74
 Identities = 163/277 (58%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
 Frame = +3

Query: 81  MAGITS-VPFKLKLFHHHNSTASPLFSSY--KLFGLSLSNPCXXXXXXXXXXXXXXDVTV 251
           MAG+TS +PFK  +F    +T+SPL+ S   +LFG+ L +P                VT 
Sbjct: 1   MAGLTSGIPFKPFIFRT-KTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHR-SVTA 58

Query: 252 XXXXXXXXXXXXXXXXXXQKGPDDDQALDLSTLRSDTVRLIDENQNMVGVVSTGQALQMA 431
                             Q+  DDDQALD+S++RS +VRLIDE QNMVGVVS  QA+QMA
Sbjct: 59  RYGGYRSSGDAWRSR---QRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMA 115

Query: 432 DDAELDLVIVSPDADPPVVRLMDYSXXXXXXXXXXXXXXXXSAANRMDLKELKMGYNIDQ 611
           +DAELDLV++SPDADPPVVR+MDY+                SAANRMDLKELKMGYNID 
Sbjct: 116 EDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDS 175

Query: 612 HDYSVRLKAAQKFLKDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGKLGKEEAKNFR 791
           HDYSVRLKAA+KFL+DGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVG+L  EE+KNF 
Sbjct: 176 HDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFS 235

Query: 792 DKNIFIILVPNQAAVQKSQETPKKRDKSAENEVSISV 902
            +NIFI+LVPN+A +QK QE+ KK +KSA  E+S  V
Sbjct: 236 VRNIFIVLVPNKALLQKGQESSKKTEKSAATEISAGV 272


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  281 bits (720), Expect = 4e-73
 Identities = 144/199 (72%), Positives = 161/199 (80%)
 Frame = +3

Query: 306 QKGPDDDQALDLSTLRSDTVRLIDENQNMVGVVSTGQALQMADDAELDLVIVSPDADPPV 485
           Q   +DD ALD+ST+RS TVRLIDE QNMVGVV   +A+QMA++A LDLVI+SPDADPPV
Sbjct: 76  QSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDADPPV 135

Query: 486 VRLMDYSXXXXXXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAAQKFLKDGD 665
           VR+MDY+                SAA RMDLKELKMGYNIDQHDY VRL+AA+KFLKDGD
Sbjct: 136 VRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGD 195

Query: 666 KVKIIVNLKGRENEFRNIAIELIRRFQNDVGKLGKEEAKNFRDKNIFIILVPNQAAVQKS 845
           KVK+IVNLKGRENEFRNIAIELIRRFQNDVG+L  EE KNFRD+NIFI L PN+A +QKS
Sbjct: 196 KVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNKAILQKS 255

Query: 846 QETPKKRDKSAENEVSISV 902
           QE PKKRDKSA NEVS  V
Sbjct: 256 QEPPKKRDKSAVNEVSAGV 274


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
           sativus]
          Length = 299

 Score =  275 bits (704), Expect = 3e-71
 Identities = 141/198 (71%), Positives = 161/198 (81%)
 Frame = +3

Query: 309 KGPDDDQALDLSTLRSDTVRLIDENQNMVGVVSTGQALQMADDAELDLVIVSPDADPPVV 488
           K  +D+  LD+S ++S  VRLID  QNMVGVVS  QA+QMA+DAELDLV+VSPDADPPVV
Sbjct: 102 KRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVV 161

Query: 489 RLMDYSXXXXXXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAAQKFLKDGDK 668
           R+MDY+                SAA RMDLKELKMGYNIDQHDYSVRLKAA+KFLKDGDK
Sbjct: 162 RIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDK 221

Query: 669 VKIIVNLKGRENEFRNIAIELIRRFQNDVGKLGKEEAKNFRDKNIFIILVPNQAAVQKSQ 848
           VK+IVNLKGRENEFRNIAIELIRRFQ +VG+L  EEAKNFRD+NIFI+LVPN+A +QK+Q
Sbjct: 222 VKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQ 281

Query: 849 ETPKKRDKSAENEVSISV 902
           E PKK+DK A N VS SV
Sbjct: 282 EPPKKKDKPAVNGVSASV 299


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